Splice junction sequence |
CGAGGAAAGTGGAAGAGCTGATATGAGGTACCTTGATCTGGTGAATCCTTCCTAAATCTGCAGG AGAAGCCACAGCATTACTTTTTAGTTCATGTATATCcttcttgcgaggattctgtttcccttgt gaagcaccaattactgccaaaataccaaagattccccatcttgtggccacacagcttgcccgtt actttcct
|
Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
|
Full-length trsnacripts |
Transcript length: 175 Transcript exons: 17828664-17828778,17832909-17832968 CTTCTTGCGAGGATTCTGTTTCCCTTGTGAAGCACCAATTACTGCCAAAATACCAAAGATTCCC CATCTTGTGGCCACACAGCTTGCCCGTTACTTTCCTGAACGTTCATTCTGCGTGAATCCTTCCT AAATCTGCAGGAGAAGCCACAGCATTACTTTTTAGTTCATGTATATC
|
Genomic sequence |
CTTCTTGCGAGGATTCTGTTTCCCTTGTGAAGCACCAATTACTGCCAAAATACCAAAGATTCCC CATCTTGTGGCCACACAGCTTGCCCGTTACTTTCCTGAACGTTCATTCTGCTCCTCCATCCTGT GATCAACCAAGTGAAGTTCATGCAAATAGCCAAAAAGCCCTCTCTAAAAATAGTTCTTCGGTTT ATTCTGCTGTGTATACCGAAATTCTAAATATTACGAGAAGTTCAGATACCATGTAAAGGAATAG AAGCCCAACAAAAGAAAATGCTCAATCAGGCCTTTAGTTGGGCACTTGAAAGTGATGGGTTTAA AAAGTTTCAGTGTACCATAATCAGTTCGTTACAATAAACAAGATAGAAGCCTTTAAAGGAAAGC ACAAACATGAACATCAAATCAGCAAAGCAAAGCAAAACGATACCAAGAAAACGATAAGAAAGAA ATGAAAATAGGACGCAAGCTGTGTCCTCTCATTGACCCAAGAAAAGATTCTACAACAGGGTCCT TTACCTGATTGACCTTTTACCGTTTCTATCTAAGCATGATTGATCAAATAGTGAAAGAGCTGCA CAGCCATTTCACCTATGTGATGCTTGCACCCTGATTGATTCGACCGACAGGACAAAACACATGT GCCACTTGCTCTCATGCTGCATGTCGTTTTCGCTCTTCAAATGTTCTGCTCCATCGAAGCATCA TCTGGTAAAATAAAGAAGTGGAGCCACCTGAGAGAAAAGAAAAGGATAAACAGCAACGTCAGTG TGGAGTTAACTTCATGCACCAACCAATCACCCCAAAGTTCACCAACCAACCGTTCGCCCAAAAG GTCAAGTTGCTAGGGAAAGATGTGCAACTCTACTAGTATCACACAAGTAAAATGAAGAAAAAAA GATGGGCAACTCGATGTGTGCGTATAAATGTATCTGTGCACGCATGTGAGTGGCCATGAAAATG ACAGATCCGTAAAACAAGGAAGCAAACCAAAGAACACAAGATATACTGGTAGGATCATCGAGTT GGACCATGACAGATAAACTTATGCACCTTATGCCTAGACGTATGCATAATGCATATTTGCATAG ATGGAAGGATCGCATCTCATACATTGATTCAATAGAATGCAACTACTTTTTGCAGTATAGGGAC ACCAAAAAGGATAAAAAAAACATGGCTCAAAATCTGCAAAACAGGCTGTAGACCGAAACAAGAT AGTTGTTACTTAAGTAGAATAACCATAGCTTATTATAATAGTCTCTGTGACAACCAATCTCCAC AGCAGACATAGCATAGATCACAAATCTTTATAAAGACCTACTCCTGAGGGTCTATAGGTTAGAG GCGACTTATCTTCCTATTCCAGGACTCCATAAGAATAATGACAGAAAAACCTTTATGCTCCAAG TTGAACACTTGAACCTTGAAACAAGCAAAAGCACGGTGTCAGGAAATTTATAATCCTCTGTGAA TTGAATAATAGACTATAAAGTAATATACTTCAGACAGAATTTCCTAACTGACTCCATTCAGATG AACCTGATTCATAATAAAGTGGTCCCATCAAACTAACCACGCATGAGATGAAAATGTTAGTGCT TCATCTTAATAAGAAAAACCTTCGGACAGACACCTACATGCATGCTAATCACAACTACAGGGAA ATGCAAAAATGTAATTATTTAGTAGTACAAAATTATCAGGCTAAGACTTCTAAGCAGACAACTA CATTGAATTCTAAACAAGATTGATACTAACCGTAGTTGTTGAAGATATGTAAGTAGAACCATAC CGCTTGACTAAAAGTTATATGTAACAATAACCAAGAAATTGTAGAGTCTTCCCACACCTATTAG CATGTCATACACAACAAATAAAAACTCTAAGGTTTTAACTGTACAATTAATTTTTGTGAATAAA TTTATTCTGAAATGAATTGTTTGATGGAAGCAGTGCCCAAATAGCACACAAAGATACACCTTAA GAACAGGTTTAGTTGGCTAGAGAGAGAGAGAGAGAGAAACATCTGTGTATTAAATGGAACGGAA AGCATAAATATTTTAGGGGGAAAAGGAGTGCTGTTCAAGTTTCAAACAGTGGAAGTCTGTCATA CATATTGAAATATATCAGAATAGAAAAGCGAGAAAGCTAATATAACAATGCATGTCGAAACAAA TGAATCATGCCAACCTAAATGGGTGCATATGTTACACTATAAAAGTACACTTTTCCTGCTCATC AACCAAAGTAGTCAGTGGACAACTGGAAAACAGCAGCGCAACCCCATCATGTAGCACAGAAACA AAAAAAAAAAAGACAGCTTAACAGATGCATAATTTTTGTTTGCTTGCATTTTTAATAAATAACC CCATTTGAACAAAGGGTTGGGAACAGGAAGAGATGAAACAATGATTGACAAAGAAGACGTAAAG GTTGCAACAAAGTCAAGCATAACTGCATCAGTGGATTTTTCAGTGGTTGCAAAGGTAGCTAAAA GAAGAACCAGCAGCAGCAACTTTGATGAAGCACGAGCGAAAAAAAAAATTTGGTTGGTGTGATA TTTTATCAAATAAGACAATTTTATCTATGCATTAGCTCCCAAACAAAAAATGGTCTACTATGCA GTCTGCACATCTATCAATGAAGAAATTTGGAGGTACATGAGAGCTGAATTATAGCTGTAAAATG TTTGTTGCATAAGCTTCAACATATTAACAATCCAAGTTCCTTCCAGACATGTCCATTCCTTAAT CTGAGATCTCACCCAAGCATGTTAAAGGGGCAGTAGGTAGACCATCAAGTAAACTAACACAGGA AATTCAAAACACAAGTACAATCAATATAAAGATATTTTTGTTCATCTATCAGAATAGCGAAGTA AGTGGTAAAAAACAATTAGTCTTTTAGATGTTTGATAGAAAGAATTTAACATGGTTGCTCAAGT CACATTTATATGTGCTGCAGTGCTTAAAAGTGAACTAAAGGTATGATTGTAGAAGGTAGTTATA TATTCTTAAATTCATTATAATCCAGAAATATATGGATTCTTAACAGAATTCCTTGACAGTTGGG CATATTGATATTTACCAGAATTTGGAAGGTGGAATAGAGCTTTAAGAGAAGACACATCAGAATG TTGATATAGTGATCCCATATCTTTTCAAAATAAAAAAGAGACATTCATTGCATAAAAAAATAAC AGGGGAAAAATATTTGTTCAACTTCTTTAAGCATGAATTGACAAACTTGATCCTCACTGAACAG GAGAGGAATGCCGAGACAAAGAACAGAGATATTGCACAGAAACACACAACTTCACTAACATGGA GAAGCTGCAACAGAGAGTAAATATAAATGTGTGATTTTTACTTTTACTAAATCATCTTAAAGCC TGCAAAGTTATAAAATGAATAGTTTTAGCGATTTCTACTAATGTAATTTGTTGAGACAAAAAAA AGAGCATAGATGGTTGCAATGCTGGAAAAAAAAACAATTCCTTTTTCTAATTAAACACAACGTC AAGTTAATTTATAACTGTCAAGTTGAATGTCTTTCTTTGAGATAAATACGATTTAATAAGAGTA AATTTAAATCAGTGTTTTAACCAAATATCGCATAAGACATTTAATGACATAGCCACAGCCGGTC AGCTACTAAACAAAGGCCAAGAGAAACTGAAAAAAAAAATGGCAACTGAGTGATACTTACTGCA TCTAAATGCAGAAGTTTTGCAAAACTCTGAATCCTATGCTAAAGGCTAAACTGCACATGGAGAA GCAGGAGAGGAGACAATTTGAAAGTTATAGCCCTTTTCCAACCTGACTTACTCACAAAAATGGT TAGCTGATATGCTAGTTCTCCACAACCACTCTTTGCAGTTTGGCCTCCCCTAAGGCTGTCATTT GCTTTGTCTCTAATCCCACTTTTGTACAGATTTTTGGTAAAGCAATTACTGTAATTCAGTGTCT CATACACCAGCATTCAGGCTATACTCTGAATCAGTAACTTAGAGGTTTTCTTAATAGGAACTTC TTGACAGGCTGACTATTATGGAAACAGAGGTACAACAAATAAAAGGATAGGAGTCTGATTACAA AAACAGAATAGATCAGAGCCTTCAAGTGCAATTTGTCTAATTTGAAATGTAATGGAACTTCTTG AAATGCACCTTGCTTTGGGCTCCAAAACTGATACTTATAAAGAAGCGAGGAAAGTGGAAGAGCT GATATGAGGTACCTTGATCTGGTGAATCCTTCCTAAATCTGCAGGAGAAGCCACAGCATTACTT TTTAGTTCATGTATATC |