Splice junction sequence |
GAAAGAGTCTGTTGAAGTACATTAAAGTAAAAGAGTGTGCTGCTGAAGCCGAATTTCTTGATCC TGGGCCATCCTTCATCTTACCTAATGTAGCTTGCAGtataactacgctggtatccgagccgatg atgaaatttcacttgacgaagtgactattgaaccaaagtggagtgttgcacgacatttacctga gtatattg
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 518 Transcript exons: 2605178-2605279,2605394-2605513,2605601-2605789,2606079- 2606185 TATAACTACGCTGGTATCCGAGCCGATGATGAAATTTCACTTGACGAAGTGACTATTGAACCAA AGTGGAGTGTTGCACGACATTTACCTGAGTATATTGAGAGGGATTTCATTATAATCATTGCCAA GTTTATATTTGACCCCTGGAAATTTGCGATAGAAAATAAAAAGGGCAGTTCAGAGAGTTTAGAG GCACAGATGATAGAATATCTAAGAGAACAGATTGGATCAACCTTCATAAATATGCTTGTCAAAA AGGTTGATGATATCATGTCACACATGAAGGAGATAAATGTTTCAGATGCATCTCGGGTTTCTGG TCAAGCTCCCAAAGGAGATTACTCGTTGGAATTTATACAGGTTATCTCTGCTGTTCTGGCTCTT GACCAAAACGTCCAGCAAGATGTTCTGGTAATGAGAAAGAGTCTGTTGAAGTACATTAAAGTAA AAGAGTGTGCTGCTGAAGCCGAATTTCTTGATCCTGGGCCATCCTTCATCTTACCTAATGTAGC TTGCAG
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Genomic sequence |
TATAACTACGCTGGTATCCGAGCCGATGATGAAATTTCACTTGACGAAGTGACTATTGAACCAA AGTGGAGTGTTGCACGACATTTACCTGAGTATATTGAGGTTTGGAGACAGAACCCTCACTCAAA CCAATGTTCATTTAGTGAAAACAAAAAACATGTGGCAACACATGGACCATTTTTCTTGGACACT GACGCATTTCATCTATCTTGGCAGAGGGATTTCATTATAATCATTGCCAAGTTTATATTTGACC CCTGGAAATTTGCGATAGAAAATAAAAAGGGCAGTTCAGAGAGTTTAGAGGCACAGATGATAGA ATATCTAAGAGAACAGGTAGCATATTAAAGCCAATTCGCTTGATCTACTTTTCATCAATCAAAA GATTGTCTCCTCATTTCTTTTTTGTTTTCTTTTATGCAGATTGGATCAACCTTCATAAATATGC TTGTCAAAAAGGTTGATGATATCATGTCACACATGAAGGAGATAAATGTTTCAGATGCATCTCG GGTTTCTGGTCAAGCTCCCAAAGGAGATTACTCGTTGGAATTTATACAGGTTATCTCTGCTGTT CTGGCTCTTGACCAAAACGTCCAGCAAGATGTTCTGGTAATTACTCCCATTCTTTTTCATTTTA ACATATGGCGTATTCACAAGTCTTCTGAATAGATTAATCTTGAATATGAAAAGTCCACTGAAGC GTTGTTTATCTTTACAGTTAAAAACCCTCTTTATAACTGATTTCATTCACAAATCCAATCTTAT CTCTGGAAATGTGGTTCTTGAAACCATGTTTACCAATAGAGCTGGATTTTTTTTTGAATGGGTT TTAACGATAGTCTTCTCAATTTTTGTCCTCTAGACCTACAATCTTGCTGATTTAATCTCTTTTC TATAGGTAATGAGAAAGAGTCTGTTGAAGTACATTAAAGTAAAAGAGTGTGCTGCTGAAGCCGA ATTTCTTGATCCTGGGCCATCCTTCATCTTACCTAATGTAGCTTGCAG |