Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G17580_circ_g.12 |
ID in PlantcircBase | ath_circ_003110 |
Alias | At_ciR4030 |
Organism | Arabidpsis thaliana |
Position | chr1: 6048757-6049085 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ, circseq_cup |
Parent gene | AT1G17580 |
Parent gene annotation |
Myosin-5 |
Parent gene strand | + |
Alternative splicing | AT1G17580_circ_g.10 AT1G17580_circ_g.11 AT1G17580_circ_g.13 |
Support reads | 5 |
Tissues | leaf |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT1G17580.1:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.17730615 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015 |