Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d038150_circ_g.1 |
ID in PlantcircBase | zma_circ_002359 |
Alias | circ2019 |
Organism | Zea mays |
Position | chr6: 149500380-149500990 JBrowse» |
Reference genome | AGPv4.38 |
Type | ue-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d038150 |
Parent gene annotation |
Probable manganese-transporting ATPase PDR2 |
Parent gene strand | - |
Alternative splicing | Zm00001d038150_circ_g.2 |
Support reads | 17 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d038150_T011:3 Zm00001d038150_T005:3 Zm00001d038150_T002:3 Zm00001d038150_T006:3 Zm00001d038150_T004:1 Zm00001d038150_T001:3 Zm00001d038150_T009:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.017594108 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |