Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G18730_circ_g.2 |
ID in PlantcircBase | ath_circ_003350 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 6461318-6462092 JBrowse» |
Reference genome | TAIR10.38 |
Type | ue-circRNA |
Identification method | MapSplice |
Parent gene | AT1G18730 |
Parent gene annotation |
Photosynthetic NDH subunit of subcomplex B 4, chloroplastic |
Parent gene strand | + |
Alternative splicing | AT1G18735_circ_g.1 |
Support reads | NA |
Tissues | leaf |
Exon boundary | Yes-No |
Splicing signals | GC-AG |
Number of exons covered | AT1G18730.5:2 AT1G18730.1:2 AT1G18730.3:2 AT1G18730.4:2 AT1G18730.2:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.180302427 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Liu et al., 2017 |