Splice junction sequence |
TGTATCTCAGATAGAAGGAAAATAGTTGAGGATGCCACATACTTGTCGTCATGTACAGGAACTC CCCATTCTTCGTCATGGAAAGCAACATAGCACGGGTcttgcgcacatggcgtgagttatcgagg attgatcgtatcttgacctctgatagtaaggaaatggcagcagtacctggcgctgttaactttt tgtcattc
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 284 Transcript exons: 5486959-5487100,5487215-5487298,5487386-5487443 CTTGCGCACATGGCGTGAGTTATCGAGGATTGATCGTATCTTGACCTCTGATAGTAAGGAAATG GCAGCAGTACCTGGCGCTGTTAACTTTTTGTCATTCAATTCAGCTACAGCGACTGGATCGAAGT CCATAAAAACTTCCCTGAGTATATGTCTTCTGGAGAGAATGTCGGTCCATGAGAGTTCGGCTAG AGCACCAGAGAGGCATAATAACTCAAAAAGCTTCTTGTCGTCATGTACAGGAACTCCCCATTCT TCGTCATGGAAAGCAACATAGCACGGGT
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Genomic sequence |
CTTGCGCACATGGCGTGAGTTATCGAGGATTGATCGTATCTTGACCTCTGATAGTAAGGAAATG GCAGCAGTACCTGGCGCTGTTAACTTTTTGTCATTCAATTCAGCTACAGCGACTGGATCGAAGT CCATAAAAACTTCCCTGTTTCAAATAAGAAGCAAATTAGGCAATCAGAGATCAGAGCTACTGGC TTAGCATCAGAAGTTTATATTGCGAATTCAAAATTCATATTACTAAAGAACTTGGTTTGGTTAC CTGAGTATATGTCTTCTGGAGAGAATGTCGGTCCATGAGAGTTCGGCTAGAGCACCAGAGAGGC ATAATAACTCAAAAAGCTTCCTACACAAGTTAACCAAGCGGTAAGAGACTCTTATAACTACAAA GTGTATCTCAGATAGAAGGAAAATAGTTGAGGATGCCACATACTTGTCGTCATGTACAGGAACT CCCCATTCTTCGTCATGGAAAGCAACATAGCACGGGT |