Detail information of Os02g0115700_circ_g.1


General Information
CircRNA Name Os02g0115700_circ_g.1
ID in PlantcircBase osa_circ_012722
Alias Os02circ01921
Organism Oryza sativa
Position chr2: 825778-827267  JBrowse»
Reference genome IRGSP-1.0.38
Type   e-circRNA
Identification method SMALT, Segemehl
Parent gene Os02g0115700
Parent gene annotation Catalase isozyme A (EC 1.11.1.6) (CAT-A). (Os02t0115700-01);Simi
lar to Catalase. (Os02t0115700-02);Similar to Catalase. (Os02t01
15700-03)
Parent gene strand -
Alternative splicing Os02g0115700_circ_g.2 Os02g0115700_circ_g.3 Os02g0115700_circ_g.4 Os02g0115700_circ_g.5 Os02g0115700_circ_g.6 Os02g0115700_circ_g.7 Os02g0115700_circ_g.8 Os02g0115700_circ_g.9 Os02g0115700_circ_g.10 Os02g0115700_circ_g.11 Os02g0115700_circ_g.12 Os02g0115700_circ_g.13 Os02g0115700_circ_g.14 Os02g0115700_circ_g.15 Os02g0115700_circ_g.16 Os02g0115700_circ_g.17 Os02g0115700_circ_g.18 Os02g0115700_circ_g.19 Os02g0115700_circ_g.20 Os02g0115700_circ_g.21
Support reads 2
Tissues panicle
Exon boundary   Yes-Yes
Splicing signals   CT-AC
Number of exons covered Os02t0115700-03:1
Os02t0115700-01:2
Os02t0115700-02:1
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   GCCCCCTGGGCCCCACTGTCAGCGCCTCGTTGTCGTTCCACACCGGAGCTCCCGCGTTCGTCGT
CGTCGTCTTCGTGTCGAACGAGCTCGACGGCCGGAActgggagaggtagttgacccagatggcg
cggagctcaggggagaccttggggtgcgcgagctcgccggcgaagcggcggatgaacctctcct
gtctatcc
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence CTGGGAGAGGTAGTTGACCCAGATGGCGCGGAGCTCAGGGGAGACCTTGGGGTGCGCGAGCTCG
CCGGCGAAGCGGCGGATGAACCTCTCCTGTCTATCCGGCGCCCACGACCTGTACCTCTCCCCGG
GCTGCTTGAAGTCGTTCTGCTTGTGTATCGTCGCCTTCTGCCTCCTCCCCACCACGGGGCGCGG
CGTGATGGGCGTCGGCGGCGCGTGGCGGAGCGGCGCGTGGCGCGATGGGTAGTAGTCCACCTCC
TCGTCCCGGTGCATGAAGTTCATGGCGCCGTCGTAGTGGTTGTTGTGGTGGGCGCACTTGGGCG
CGTTCACCGGCAGCATCAGGTAGTTTGGCCCCAGCCTGTAGCGCTGCGTGTCGGCGTACGCGAA
CACCCTGCACTGCAGCATCTTGTCGTCGGAGTAGTAGATCCCCGGCACCACCAGCCCCGGCCCG
AACGCCAGCTGCTCGTTCTCGTTGAAGAAGTTGTCGACGTTGCGGTTGAGAACGAGGCGCCCCA
CGGGCCGGAGCGGCACCTCGTCCTCCGGCCATGTCTTGGTGTCATCCAGCGGGTCGAAGTCGAA
CCTCTCCTCCTCCTCCGGGTCGATCACCTAACAGTATTAAATAATTAATTAGAAGGAGTACTGC
GGCTTCGAACTCAGATCGTATAGGCGTTAATTTCTGGATGATCACCTACCTGGACGAACAGCTT
CCACTCGGGGAAGTTGCCGGCGGCGATGGAGTCGTAGAGGTCCTGGGTGGCGTGGCTGTGGTTC
TTGCCGCCGACGAGCGTGGCCTCGTCGTCCATCAAGCAGCTGACGCCGCAGGTGGGCTTCCAGT
GGAACTTGACGTACCTGGCCTTGGCGTCGCGGGTGACGAAGGTGTAGGTGTTGACGCCGAAGCC
GTCCATGTGGCGGTAATCGGTGGGGATGCCGACGTCGTCGAAGAGGAAGAAGAAGGTGTGGAGG
CTCTCGGGGTGGTGGGACAAGAAGTCGAAGACCCTCCAGTACTCCTGGACATGGGAGCGCGGGT
TGGGCTTGAAGGCGTGGATGACGTCGGGGAACTTGATGCCGTCGCGGATGAAGAAGACGGGGAA
GTTGTTGCCGAGGAGGTCCCAGTTGCCCTCGCGGGTGTAGAACTTGACGGCGAACCCGCGCGGG
TCGCGGATCGTCTCCGGGCTGCCGCGCTCGTGGATGACGGTGGAGAAGCGGACGATGACGGGGG
TCTGGGCGCCCGGGGACCGGAGGAAGTCGGCGCAGGTGATGTCGGTGACGTCGTGGGTGCACTC
GAAGAAGCCCTTGGCGGAGGCGCCGCGGGCGTGGACCACGCGCTCCGGGATGCGCTCCCGGGCG
AAGTGCGCCACCTTCTCGATCAGGTGGTAGTCCTCGAGGAGGATCGGCCCCCTGGGCCCCACTG
TCAGCGCCTCGTTGTCGTTCCACACCGGAGCTCCCGCGTTCGTCGTCGTCGTCTTCGTGTCGAA
CGAGCTCGACGGCCGGAA
Conservation Information
Conserved circRNAs NA
PMCS 0.32727198
Functional Information
Coding potential Y
Potential coding position 826789-827264(+)
826681-825780(-)
Potential amino acid sequence MGARVGLEGVDDVGELDAVADEEDGEVVAEEVPVALAGVELDGEPARVADRLRAAALVDDGGEA
DDDGGLGARGPEEVGAGDVGDVVGALEEALGGGAAGVDHALRDALPGEVRHLLDQVVVLEEDRP
PGPHCQRLVVVPHRSSRVRRRRLRVERARRPELGEVVDPDGAELRGDLGVRELAGEAADEPLLS
IRRPRPVPLPGLLEVVLLVYRRLLPPPHHGARRDGRRRRVAERRVARWVVVHLLVPVHEVHGAV
VVVVVVGALGRVHRQHQVVWPQPVALRVGVREHPALQHLVVGVVDPRHHQPRPERQLLVLVEEV
VDVAVENEAPHGPERHLVLRPCLGVIQRVEVEPLLLLRVDHLDEQLPLGEVAGGDGVVEVLGGV
AVVLAADERGLVVHQAADAAGGLPVELDVPGLGVAGDEGVGVDAEAVHVAVIGGDADVVEEEEE
GVEALGVVGQEVEDPPVLLDMGARVGLEGVDDVGELDAVADEEDGEVVAEEVPVALAGVELDGE
PARVADRLRAAALVDDGGEADDDGGLGARGPEEVGAGDVGDVVGALEEALGGGAAGVDHALRDA
LPGEVRHLLDQVVVLEEDRPPGPHCQRLVVVPHRSSRVRRRRLRVERARRPELGEVVDPDGAEL
RGDLGVRELAGEAADEPLLSIRRPRPVPLPGLLEVVLLVYRRLLPPPHHGARRDGRRRRVAERR
VARWVVVHLLVPVHEVHGAVVVVVVVGALGRVHRQHQVVWPQPVALRVGVREHPALQHLVVGVV
DPRHHQPRPERQLLVLVEEVVDVAVENEAPHGPERHLVLRPCLGVIQRVEVEPLLLLRVDHLDE
QLPLGEVAGGDGVVEVLGGVAVVLAADERGLVVHQAADAAGGLPVELDVPGLGVAGDEGVGVDA
EAVHVAVIGGDADVVEEEEEGVEALGVVGQEVEDPPVLLDMGARVGLEGVDDVGELDAVADEED
GEVVAEEVPVALAGVELDGEPARVADRLRAAALVDDGGEADDDGGLGARGPEEVGAGDVGDVVG
ALEEALGGGAAGVDHALRDALPGEVRHLLDQVVVLEEDRPPGPHCQRLVVVPHRSSRVRRRRLR
VERARRPELGEVVDPDGAELRGDLGVRELAGEAADEPLLSIRRPRPVPLPGLLEVVLLVYRRLL
PPPHHGARRDGRRRRVAERRVARWVVVHLLVPVHEVHGAVVVVVVVGALGRVHRQHQVVWPQPV
ALRVGVREHPALQHLVVGVVDPRHHQPRPERQLLVLVEEVVDVAVENEAPHGPERHLVLRPCLG
VIQRVEVEPLLLLRVDHLDEQLPLGEVAGGDGVVEVLGGVAVVLAADERGLVVHQAADAAGGLP
VELDVPGLGVAGDEGVGVDAEAVHVAVIGGDADVVEEEEEGVEALGVVGQEVEDPPVLLDMGAR
VGLEGVDDVGELDAVADEEDGEVVAEEVPVALAGVELDGEPARVADRLRAAALVDDGGEADDDG
GLGARGPEEVGAGDVGDVVGALEEALGGGAAGVDHALRDALPGEVRHLLDQVVVLEEDRPPGPH
CQRLVVVPHRSSRVRRRRLRVERARRPE(+)
MDGFGVNTYTFVTRDAKARYVKFHWKPTCGVSCLMDDEATLVGGKNHSHATQDLYDSIAAGNFP
EWKLFVQVIDPEEEERFDFDPLDDTKTWPEDEVPLRPVGRLVLNRNVDNFFNENEQLAFGPGLV
VPGIYYSDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPKCAHHNNHYDGAMNFMHRDEEVDYY
PSRHAPLRHAPPTPITPRPVVGRRQKATIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHP
KVSPELRAIWVNYLSQFRPSSSFDTKTTTTNAGAPVWNDNEALTVGPRGPILLEDYHLIEKVAH
FARERIPERVVHARGASAKGFFECTHDVTDITCADFLRSPGAQTPVIVRFSTVIHERGSPETIR
DPRGFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPRSHVQEYWRVFDFLSHHPE
SLHTFFFLFDDVGIPTDYRHMDGFGVNTYTFVTRDAKARYVKFHWKPTCGVSCLMDDEATLVGG
KNHSHATQDLYDSIAAGNFPEWKLFVQVIDPEEEERFDFDPLDDTKTWPEDEVPLRPVGRLVLN
RNVDNFFNENEQLAFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPKCAHH
NNHYDGAMNFMHRDEEVDYYPSRHAPLRHAPPTPITPRPVVGRRQKATIHKQNDFKQPGERYRS
WAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQFRPSSSFDTKTTTTNAGAPVWNDNEALT
VGPRGPILLEDYHLIEKVAHFARERIPERVVHARGASAKGFFECTHDVTDITCADFLRSPGAQT
PVIVRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPN
PRSHVQEYWRVFDFLSHHPESLHTFFFLFDDVGIPTDYRHMDGFGVNTYTFVTRDAKARYVKFH
WKPTCGVSCLMDDEATLVGGKNHSHATQDLYDSIAAGNFPEWKLFVQVIDPEEEERFDFDPLDD
TKTWPEDEVPLRPVGRLVLNRNVDNFFNENEQLAFGPGLVVPGIYYSDDKMLQCRVFAYADTQR
YRLGPNYLMLPVNAPKCAHHNNHYDGAMNFMHRDEEVDYYPSRHAPLRHAPPTPITPRPVVGRR
QKATIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQFRPSSSFD
TKTTTTNAGAPVWNDNEALTVGPRGPILLEDYHLIEKVAHFARERIPERVVHARGASAKGFFEC
THDVTDITCADFLRSPGAQTPVIVRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLGNNFP
VFFIRDGIKFPDVIHAFKPNPRSHVQEYWRVFDFLSHHPESLHTFFFLFDDVGIPTDYRHMDGF
GVNTYTFVTRDAKARYVKFHWKPTCGVSCLMDDEATLVGGKNHSHATQDLYDSIAAGNFPEWKL
FVQVIDPEEEERFDFDPLDDTKTWPEDEVPLRPVGRLVLNRNVDNFFNENEQLAFGPGLVVPGI
YYSDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPKCAHHNNHYDGAMNFMHRDEEVDYYPSRH
APLRHAPPTPITPRPVVGRRQKATIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSP
ELRAIWVNYLSQ(-)
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Lu et al., 2015