Plant Circular RNA Database

Detail information of orai.009G175800_circ_g.1

			
						 General Information
					
						CircRNA Name
						orai.009G175800_circ_g.1
					
						ID in PlantcircBase
						gra_circ_000949
					
						Alias
						Chr09:13609075|13611723
					
						Organism
						
							Gossypium raimondii						
					
						Position
						
							chrChr09: 13609075-13611723  JBrowse»						
					
						Reference genome
						
							Graimondii_221						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Gorai.009G175800						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						+
					
						Alternative splicing
						
							NA						
					
						Support reads
						2/2
					
						Tissues
						leaf/ovule
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Gorai.009G175800.1:10

General Information
CircRNA Name	orai.009G175800_circ_g.1
ID in PlantcircBase	gra_circ_000949
Alias	Chr09:13609075\|13611723
Organism	Gossypium raimondii
Position	chrChr09: 13609075-13611723 JBrowse»
Reference genome	Graimondii_221
Type	e-circRNA
Identification method	CIRI
Parent gene	Gorai.009G175800
Parent gene annotation	NA
Parent gene strand	+
Alternative splicing	NA
Support reads	2/2
Tissues	leaf/ovule
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Gorai.009G175800.1:10

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TAACAAGAGCTTATCGAGTTTGAGTGATGTCATATTTGCGTTGGCCAAAAAGGAGGATCATGTG
CCTTTTAGGAATTCCAAGCTGACATATCTTCTCCAGgcttcacaagatgatgctgttaatcaaa
aggaaacattagttaatgaagtcaaatgtctacgaggggaactacaacaagtgagggatgatcg
tgaacacc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1353
Transcript exons: 13609075-13609284,13609362-13609436,13609550-13609696,13
609770-13609905,13609994-13610103,13610432-13610593,1361
0671-13610891,13611256-13611337,13611434-13611538,136116
19-13611723
GCTTCACAAGATGATGCTGTTAATCAAAAGGAAACATTAGTTAATGAAGTCAAATGTCTACGAG
GGGAACTACAACAAGTGAGGGATGATCGTGAACACCAAGTGTCAAAAGTTCAAGCCTTATCTGC
CGAAATAGTGAAGTTCAAGGAAAGTACTGGAAGATCATTTGCAGAATTAGATAACTTGACTATG
AAATCAAAATCCTTGGAGGAAACATGCTCTTCTCAGAGGGAGCAACTAAGAATACTGGAACTTC
AGCTTGCAGCTGCAAACGAGAAACTAAAGAGGGCTGATTTATCAGCTTCAGAAACAAGGGTGGA
ATATTTAGAACAAAAAAGAACCATACAAGAACTACAAGATCGATTGGCAGATATGGAACATAAA
CTGATTGAAGGAGAGAATTTAAGGAAAAAGCTGCACAATACTATTTTGGAACTGAAAGGGAATA
TTCGTGTATTTTGTCGGGTACGTCCTCTATTACCGGATGATGGTGCGGCAGAAGGTGCAGTAGT
CTCTTATCCTACATCAACGGAATCTCTTGGCCGTGGAATTGACTTGATACAAAATGGGCAAAAA
TATCCTTTCACATTTGACAAGGTTTTCAATCCTGAAGCTTCACAGCAAGATGTTTTTGTGGAGA
TATCCCAGTTGGTCCAGAGTGCCCTTGATGGATACAAGGTTTGTATATTTGCCTATGGACAGAC
AGGATCAGGTAAGACTTATACTATGATGGGAAGGCCAGAAGCCCAAGAGCAAAAAGGGTTGATA
CCTCGTTCGTTGGAGCAGATATTCCAAAGTAGCCAGTTACTGCAGGCACAAGGATGGAAATACA
AAATGCTGGCTTCAATGTTGGAAATATACAACGAGACCATTCGTGATTTGTTATCAACCAATCG
ATCTATTGGTTCAGATCCAACGCGTGCAGAAAGTGCAGTTTCTGGAAAGCAGTATACAATTAAA
CATGATGCAAATGGTAATACACATGTCAGTGATCTGACCATTGTCGATGTTAGTACCATAACAG
AGATTTCCTCTCTTTTAAGGCAGGCTGCTCAAAGCAGGTCTGTGGGCAGGACGCAGATGAATGA
ACAATCGTCTAGAAGTCACATGGTTTTTACATTAAGGATATTGGGCATAAACGAGGGTACTGAG
CAACAAGTACAGGGTGTCTTGAATCTCATTGATCTTGCAGGAAGTGAACGATTGTCAAAGAGTG
GTGCAACTGGAGATAGGTTGAAGGAGACTCAGGCCATTAACAAGAGCTTATCGAGTTTGAGTGA
TGTCATATTTGCGTTGGCCAAAAAGGAGGATCATGTGCCTTTTAGGAATTCCAAGCTGACATAT
CTTCTCCAG
						
					

						Genomic sequence
						
							GCTTCACAAGATGATGCTGTTAATCAAAAGGAAACATTAGTTAATGAAGTCAAATGTCTACGAG
GGGAACTACAACAAGTGAGGGATGATCGTGAACACCAAGTGTCAAAAGTTCAAGCCTTATCTGC
CGAAATAGTGAAGTTCAAGGAAAGTACTGGAAGATCATTTGCAGAATTAGATAACTTGACTATG
AAATCAAAATCCTTGGAGGTTGGTTGACTTTCTTAATACCAAATAGTAAAATCCATTTGGGCCA
GCTTTCCTAGATTGCTTTTTACCTTTTGCAGGAAACATGCTCTTCTCAGAGGGAGCAACTAAGA
ATACTGGAACTTCAGCTTGCAGCTGCAAACGAGAAACTAAAGGTAACAATGGCAATGCTTAAAA
TATAGACTTTATTTTCTTTATCTTCTTCTGCAAAAATATCATCAATCTGTCTCCTGATGTCATA
GCTTTTTCTTCCTTTTCCTTTCTCCAGAGGGCTGATTTATCAGCTTCAGAAACAAGGGTGGAAT
ATTTAGAACAAAAAAGAACCATACAAGAACTACAAGATCGATTGGCAGATATGGAACATAAACT
GATTGAAGGAGAGAATTTAAGGAAAAAGCTGCACAATACTATTTTGGTACTACAAGATCGATTG
CCCTCCATTTGTCGCTTGTAATTATGTGATGATACTAACTTACCTATAATTGCAGGAACTGAAA
GGGAATATTCGTGTATTTTGTCGGGTACGTCCTCTATTACCGGATGATGGTGCGGCAGAAGGTG
CAGTAGTCTCTTATCCTACATCAACGGAATCTCTTGGCCGTGGAATTGACTTGATACAAAATGG
TATGAATTTTCTGTTCTTTCATTGCTATTCAATTTCTGTTCATGTCAAAAGCAACAGCCTTAAT
AAATTTTATCTCATTGTTAACAGGGCAAAAATATCCTTTCACATTTGACAAGGTTTTCAATCCT
GAAGCTTCACAGCAAGATGTTTTTGTGGAGATATCCCAGTTGGTCCAGAGTGCCCTTGATGGAT
ACAAGGTGATTTAGCTACTTTATAGTTTATACTTGTGTTTTTGTGAGTGGTGGGAAGGATTGTT
TTTTCTTTTGTGTTTTTGTGAGTGGTGGGAAGGATTGTTTTTTCTTTTTCTTTCTTTTCAAAAC
TAAGGAAGATTTACATTTAAAGGTAGGTAATTCCTTTTGCACATACTTGTCTTCTTTGAAGCTA
AATCCTGAATGTCTATTCTGATATTTGAGTTATAAAATCACTAGCAATTGTCTATGGTTGCTAT
TTGATCTACATTATTTGCCTCTAGATACAGAGGAAATATGCATTCACAGGCTGTTGGTGGTTTG
TTTTGTTTTCCAGGTTTGTATATTTGCCTATGGACAGACAGGATCAGGTAAGACTTATACTATG
ATGGGAAGGCCAGAAGCCCAAGAGCAAAAAGGGTTGATACCTCGTTCGTTGGAGCAGATATTCC
AAAGTAGCCAGTTACTGCAGGCACAAGGATGGAAATACAAAATGCTGGTAATTTAATTCGATTC
TGGTTTCCACCTATTACATTGGTTAATCATGGTTTTAATCATCCCTTTATAAAATTTTAGGCTT
CAATGTTGGAAATATACAACGAGACCATTCGTGATTTGTTATCAACCAATCGATCTATTGGTTC
AGATCCAACGCGTGCAGAAAGTGCAGTTTCTGGAAAGCAGTATACAATTAAACATGATGCAAAT
GGTAATACACATGTCAGTGATCTGACCATTGTCGATGTTAGTACCATAACAGAGATTTCCTCTC
TTTTAAGGCAGGCTGCTCAAAGCAGGTAAAATTGTTTACAATCTTGATGAATTTTTTTCCAATG
TTGAACTGATTTGTCTTGCATTATGCATCTACCTTAGTTTGAGTAAGTTTCTACAGTGTTAAGT
TGGAATTAAAATTGTTCCAGAAATTTCCCAAGTGAATGACTTTTTATGGAAAGACTTGGTTCTT
TTAAATTACTAATCATTACAAACTATGAAATGTTTATGAATGATGAGGCAGTTAGTTTCTAGTG
TAGGTAGCACAAAACTAAAAGAAAAAAAAAGACAAAAGTTTCTCTGATATATAATGCCTCATGA
GTTTCTTCTTAATGACCATGTTACGGTACATTTGGATATTTAAGGGGGTTCTGTTTTTCTGTTT
TCCAGGTCTGTGGGCAGGACGCAGATGAATGAACAATCGTCTAGAAGTCACATGGTTTTTACAT
TAAGGATATTGGGCATAAACGAGGTAAATATACTTACTTTGAGTGCGTTCTTTATGTTGAATCT
CTTGATAACCCTGTTTCTTATGTATACTGACATTTCTTTGCTTTGGTTCTGTAAGGGTACTGAG
CAACAAGTACAGGGTGTCTTGAATCTCATTGATCTTGCAGGAAGTGAACGATTGTCAAAGAGTG
GTGCAACTGGAGATAGGTTGAAGGAGACTCAGGTGTTTACATACTACTTGATTTTTCCTTTTCA
TAAATTGTTCTTTAATGTTATTACGCTGACGTCTTTCAATAAAACTAGGCCATTAACAAGAGCT
TATCGAGTTTGAGTGATGTCATATTTGCGTTGGCCAAAAAGGAGGATCATGTGCCTTTTAGGAA
TTCCAAGCTGACATATCTTCTCCAG
						
					

			
		

Sequences
Splice junction sequence	TAACAAGAGCTTATCGAGTTTGAGTGATGTCATATTTGCGTTGGCCAAAAAGGAGGATCATGTG CCTTTTAGGAATTCCAAGCTGACATATCTTCTCCAGgcttcacaagatgatgctgttaatcaaa aggaaacattagttaatgaagtcaaatgtctacgaggggaactacaacaagtgagggatgatcg tgaacacc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1353 Transcript exons: 13609075-13609284,13609362-13609436,13609550-13609696,13 609770-13609905,13609994-13610103,13610432-13610593,1361 0671-13610891,13611256-13611337,13611434-13611538,136116 19-13611723 GCTTCACAAGATGATGCTGTTAATCAAAAGGAAACATTAGTTAATGAAGTCAAATGTCTACGAG GGGAACTACAACAAGTGAGGGATGATCGTGAACACCAAGTGTCAAAAGTTCAAGCCTTATCTGC CGAAATAGTGAAGTTCAAGGAAAGTACTGGAAGATCATTTGCAGAATTAGATAACTTGACTATG AAATCAAAATCCTTGGAGGAAACATGCTCTTCTCAGAGGGAGCAACTAAGAATACTGGAACTTC AGCTTGCAGCTGCAAACGAGAAACTAAAGAGGGCTGATTTATCAGCTTCAGAAACAAGGGTGGA ATATTTAGAACAAAAAAGAACCATACAAGAACTACAAGATCGATTGGCAGATATGGAACATAAA CTGATTGAAGGAGAGAATTTAAGGAAAAAGCTGCACAATACTATTTTGGAACTGAAAGGGAATA TTCGTGTATTTTGTCGGGTACGTCCTCTATTACCGGATGATGGTGCGGCAGAAGGTGCAGTAGT CTCTTATCCTACATCAACGGAATCTCTTGGCCGTGGAATTGACTTGATACAAAATGGGCAAAAA TATCCTTTCACATTTGACAAGGTTTTCAATCCTGAAGCTTCACAGCAAGATGTTTTTGTGGAGA TATCCCAGTTGGTCCAGAGTGCCCTTGATGGATACAAGGTTTGTATATTTGCCTATGGACAGAC AGGATCAGGTAAGACTTATACTATGATGGGAAGGCCAGAAGCCCAAGAGCAAAAAGGGTTGATA CCTCGTTCGTTGGAGCAGATATTCCAAAGTAGCCAGTTACTGCAGGCACAAGGATGGAAATACA AAATGCTGGCTTCAATGTTGGAAATATACAACGAGACCATTCGTGATTTGTTATCAACCAATCG ATCTATTGGTTCAGATCCAACGCGTGCAGAAAGTGCAGTTTCTGGAAAGCAGTATACAATTAAA CATGATGCAAATGGTAATACACATGTCAGTGATCTGACCATTGTCGATGTTAGTACCATAACAG AGATTTCCTCTCTTTTAAGGCAGGCTGCTCAAAGCAGGTCTGTGGGCAGGACGCAGATGAATGA ACAATCGTCTAGAAGTCACATGGTTTTTACATTAAGGATATTGGGCATAAACGAGGGTACTGAG CAACAAGTACAGGGTGTCTTGAATCTCATTGATCTTGCAGGAAGTGAACGATTGTCAAAGAGTG GTGCAACTGGAGATAGGTTGAAGGAGACTCAGGCCATTAACAAGAGCTTATCGAGTTTGAGTGA TGTCATATTTGCGTTGGCCAAAAAGGAGGATCATGTGCCTTTTAGGAATTCCAAGCTGACATAT CTTCTCCAG
Genomic sequence	GCTTCACAAGATGATGCTGTTAATCAAAAGGAAACATTAGTTAATGAAGTCAAATGTCTACGAG GGGAACTACAACAAGTGAGGGATGATCGTGAACACCAAGTGTCAAAAGTTCAAGCCTTATCTGC CGAAATAGTGAAGTTCAAGGAAAGTACTGGAAGATCATTTGCAGAATTAGATAACTTGACTATG AAATCAAAATCCTTGGAGGTTGGTTGACTTTCTTAATACCAAATAGTAAAATCCATTTGGGCCA GCTTTCCTAGATTGCTTTTTACCTTTTGCAGGAAACATGCTCTTCTCAGAGGGAGCAACTAAGA ATACTGGAACTTCAGCTTGCAGCTGCAAACGAGAAACTAAAGGTAACAATGGCAATGCTTAAAA TATAGACTTTATTTTCTTTATCTTCTTCTGCAAAAATATCATCAATCTGTCTCCTGATGTCATA GCTTTTTCTTCCTTTTCCTTTCTCCAGAGGGCTGATTTATCAGCTTCAGAAACAAGGGTGGAAT ATTTAGAACAAAAAAGAACCATACAAGAACTACAAGATCGATTGGCAGATATGGAACATAAACT GATTGAAGGAGAGAATTTAAGGAAAAAGCTGCACAATACTATTTTGGTACTACAAGATCGATTG CCCTCCATTTGTCGCTTGTAATTATGTGATGATACTAACTTACCTATAATTGCAGGAACTGAAA GGGAATATTCGTGTATTTTGTCGGGTACGTCCTCTATTACCGGATGATGGTGCGGCAGAAGGTG CAGTAGTCTCTTATCCTACATCAACGGAATCTCTTGGCCGTGGAATTGACTTGATACAAAATGG TATGAATTTTCTGTTCTTTCATTGCTATTCAATTTCTGTTCATGTCAAAAGCAACAGCCTTAAT AAATTTTATCTCATTGTTAACAGGGCAAAAATATCCTTTCACATTTGACAAGGTTTTCAATCCT GAAGCTTCACAGCAAGATGTTTTTGTGGAGATATCCCAGTTGGTCCAGAGTGCCCTTGATGGAT ACAAGGTGATTTAGCTACTTTATAGTTTATACTTGTGTTTTTGTGAGTGGTGGGAAGGATTGTT TTTTCTTTTGTGTTTTTGTGAGTGGTGGGAAGGATTGTTTTTTCTTTTTCTTTCTTTTCAAAAC TAAGGAAGATTTACATTTAAAGGTAGGTAATTCCTTTTGCACATACTTGTCTTCTTTGAAGCTA AATCCTGAATGTCTATTCTGATATTTGAGTTATAAAATCACTAGCAATTGTCTATGGTTGCTAT TTGATCTACATTATTTGCCTCTAGATACAGAGGAAATATGCATTCACAGGCTGTTGGTGGTTTG TTTTGTTTTCCAGGTTTGTATATTTGCCTATGGACAGACAGGATCAGGTAAGACTTATACTATG ATGGGAAGGCCAGAAGCCCAAGAGCAAAAAGGGTTGATACCTCGTTCGTTGGAGCAGATATTCC AAAGTAGCCAGTTACTGCAGGCACAAGGATGGAAATACAAAATGCTGGTAATTTAATTCGATTC TGGTTTCCACCTATTACATTGGTTAATCATGGTTTTAATCATCCCTTTATAAAATTTTAGGCTT CAATGTTGGAAATATACAACGAGACCATTCGTGATTTGTTATCAACCAATCGATCTATTGGTTC AGATCCAACGCGTGCAGAAAGTGCAGTTTCTGGAAAGCAGTATACAATTAAACATGATGCAAAT GGTAATACACATGTCAGTGATCTGACCATTGTCGATGTTAGTACCATAACAGAGATTTCCTCTC TTTTAAGGCAGGCTGCTCAAAGCAGGTAAAATTGTTTACAATCTTGATGAATTTTTTTCCAATG TTGAACTGATTTGTCTTGCATTATGCATCTACCTTAGTTTGAGTAAGTTTCTACAGTGTTAAGT TGGAATTAAAATTGTTCCAGAAATTTCCCAAGTGAATGACTTTTTATGGAAAGACTTGGTTCTT TTAAATTACTAATCATTACAAACTATGAAATGTTTATGAATGATGAGGCAGTTAGTTTCTAGTG TAGGTAGCACAAAACTAAAAGAAAAAAAAAGACAAAAGTTTCTCTGATATATAATGCCTCATGA GTTTCTTCTTAATGACCATGTTACGGTACATTTGGATATTTAAGGGGGTTCTGTTTTTCTGTTT TCCAGGTCTGTGGGCAGGACGCAGATGAATGAACAATCGTCTAGAAGTCACATGGTTTTTACAT TAAGGATATTGGGCATAAACGAGGTAAATATACTTACTTTGAGTGCGTTCTTTATGTTGAATCT CTTGATAACCCTGTTTCTTATGTATACTGACATTTCTTTGCTTTGGTTCTGTAAGGGTACTGAG CAACAAGTACAGGGTGTCTTGAATCTCATTGATCTTGCAGGAAGTGAACGATTGTCAAAGAGTG GTGCAACTGGAGATAGGTTGAAGGAGACTCAGGTGTTTACATACTACTTGATTTTTCCTTTTCA TAAATTGTTCTTTAATGTTATTACGCTGACGTCTTTCAATAAAACTAGGCCATTAACAAGAGCT TATCGAGTTTGAGTGATGTCATATTTGCGTTGGCCAAAAAGGAGGATCATGTGCCTTTTAGGAA TTCCAAGCTGACATATCTTCTCCAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.767656027

Conservation Information
Conserved circRNAs	NA
PMCS	0.767656027

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							13609264-13611720(+)
						
					

						Potential amino acid sequence
						
							MKSKSLEETCSSQREQLRILELQLAAANEKLKRADLSASETRVEYLEQKRTIQELQDRLADMEH
KLIEGENLRKKLHNTILELKGNIRVFCRVRPLLPDDGAAEGAVVSYPTSTESLGRGIDLIQNGQ
KYPFTFDKVFNPEASQQDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPEAQEQKGL
IPRSLEQIFQSSQLLQAQGWKYKMLASMLEIYNETIRDLLSTNRSIGSDPTRAESAVSGKQYTI
KHDANGNTHVSDLTIVDVSTITEISSLLRQAAQSRSVGRTQMNEQSSRSHMVFTLRILGINEGT
EQQVQGVLNLIDLAGSERLSKSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLT
YLLQASQDDAVNQKETLVNEVKCLRGELQQVRDDREHQVSKVQALSAEIVKFKESTGRSFAELD
NLTMKSKSLEETCSSQREQLRILELQLAAANEKLKRADLSASETRVEYLEQKRTIQELQDRLAD
MEHKLIEGENLRKKLHNTILELKGNIRVFCRVRPLLPDDGAAEGAVVSYPTSTESLGRGIDLIQ
NGQKYPFTFDKVFNPEASQQDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPEAQEQ
KGLIPRSLEQIFQSSQLLQAQGWKYKMLASMLEIYNETIRDLLSTNRSIGSDPTRAESAVSGKQ
YTIKHDANGNTHVSDLTIVDVSTITEISSLLRQAAQSRSVGRTQMNEQSSRSHMVFTLRILGIN
EGTEQQVQGVLNLIDLAGSERLSKSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNS
KLTYLLQASQDDAVNQKETLVNEVKCLRGELQQVRDDREHQVSKVQALSAEIVKFKESTGRSFA
ELDNLTMKSKSLEETCSSQREQLRILELQLAAANEKLKRADLSASETRVEYLEQKRTIQELQDR
LADMEHKLIEGENLRKKLHNTILELKGNIRVFCRVRPLLPDDGAAEGAVVSYPTSTESLGRGID
LIQNGQKYPFTFDKVFNPEASQQDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPEA
QEQKGLIPRSLEQIFQSSQLLQAQGWKYKMLASMLEIYNETIRDLLSTNRSIGSDPTRAESAVS
GKQYTIKHDANGNTHVSDLTIVDVSTITEISSLLRQAAQSRSVGRTQMNEQSSRSHMVFTLRIL
GINEGTEQQVQGVLNLIDLAGSERLSKSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHVPF
RNSKLTYLLQASQDDAVNQKETLVNEVKCLRGELQQVRDDREHQVSKVQALSAEIVKFKESTGR
SFAELDNLTMKSKSLEETCSSQREQLRILELQLAAANEKLKRADLSASETRVEYLEQKRTIQEL
QDRLADMEHKLIEGENLRKKLHNTILELKGNIRVFCRVRPLLPDDGAAEGAVVSYPTSTESLGR
GIDLIQNGQKYPFTFDKVFNPEASQQDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGR
PEAQEQKGLIPRSLEQIFQSSQLLQAQGWKYKMLASMLEIYNETIRDLLSTNRSIGSDPTRAES
AVSGKQYTIKHDANGNTHVSDLTIVDVSTITEISSLLRQAAQSRSVGRTQMNEQSSRSHMVFTL
RILGINEGTEQQVQGVLNLIDLAGSERLSKSGATGDRLKETQAINKSLSSLSDVIFALAKKEDH
VPFRNSKLTYLLQ(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	13609264-13611720(+)
Potential amino acid sequence	MKSKSLEETCSSQREQLRILELQLAAANEKLKRADLSASETRVEYLEQKRTIQELQDRLADMEH KLIEGENLRKKLHNTILELKGNIRVFCRVRPLLPDDGAAEGAVVSYPTSTESLGRGIDLIQNGQ KYPFTFDKVFNPEASQQDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPEAQEQKGL IPRSLEQIFQSSQLLQAQGWKYKMLASMLEIYNETIRDLLSTNRSIGSDPTRAESAVSGKQYTI KHDANGNTHVSDLTIVDVSTITEISSLLRQAAQSRSVGRTQMNEQSSRSHMVFTLRILGINEGT EQQVQGVLNLIDLAGSERLSKSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLT YLLQASQDDAVNQKETLVNEVKCLRGELQQVRDDREHQVSKVQALSAEIVKFKESTGRSFAELD NLTMKSKSLEETCSSQREQLRILELQLAAANEKLKRADLSASETRVEYLEQKRTIQELQDRLAD MEHKLIEGENLRKKLHNTILELKGNIRVFCRVRPLLPDDGAAEGAVVSYPTSTESLGRGIDLIQ NGQKYPFTFDKVFNPEASQQDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPEAQEQ KGLIPRSLEQIFQSSQLLQAQGWKYKMLASMLEIYNETIRDLLSTNRSIGSDPTRAESAVSGKQ YTIKHDANGNTHVSDLTIVDVSTITEISSLLRQAAQSRSVGRTQMNEQSSRSHMVFTLRILGIN EGTEQQVQGVLNLIDLAGSERLSKSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNS KLTYLLQASQDDAVNQKETLVNEVKCLRGELQQVRDDREHQVSKVQALSAEIVKFKESTGRSFA ELDNLTMKSKSLEETCSSQREQLRILELQLAAANEKLKRADLSASETRVEYLEQKRTIQELQDR LADMEHKLIEGENLRKKLHNTILELKGNIRVFCRVRPLLPDDGAAEGAVVSYPTSTESLGRGID LIQNGQKYPFTFDKVFNPEASQQDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPEA QEQKGLIPRSLEQIFQSSQLLQAQGWKYKMLASMLEIYNETIRDLLSTNRSIGSDPTRAESAVS GKQYTIKHDANGNTHVSDLTIVDVSTITEISSLLRQAAQSRSVGRTQMNEQSSRSHMVFTLRIL GINEGTEQQVQGVLNLIDLAGSERLSKSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHVPF RNSKLTYLLQASQDDAVNQKETLVNEVKCLRGELQQVRDDREHQVSKVQALSAEIVKFKESTGR SFAELDNLTMKSKSLEETCSSQREQLRILELQLAAANEKLKRADLSASETRVEYLEQKRTIQEL QDRLADMEHKLIEGENLRKKLHNTILELKGNIRVFCRVRPLLPDDGAAEGAVVSYPTSTESLGR GIDLIQNGQKYPFTFDKVFNPEASQQDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGR PEAQEQKGLIPRSLEQIFQSSQLLQAQGWKYKMLASMLEIYNETIRDLLSTNRSIGSDPTRAES AVSGKQYTIKHDANGNTHVSDLTIVDVSTITEISSLLRQAAQSRSVGRTQMNEQSSRSHMVFTL RILGINEGTEQQVQGVLNLIDLAGSERLSKSGATGDRLKETQAINKSLSSLSDVIFALAKKEDH VPFRNSKLTYLLQ(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zhao et al., 2017b

circRNA

Detail information of orai.009G175800_circ_g.1

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