Plant Circular RNA Database

Detail information of Solyc01g098160.2_circ_g.2

			
						 General Information
					
						CircRNA Name
						Solyc01g098160.2_circ_g.2
					
						ID in PlantcircBase
						sly_circ_000358
					
						Alias
						NA
					
						Organism
						
							Solanum lycopersicum						
					
						Position
						
							chr1: 88734969-88739363  JBrowse»						
					
						Reference genome
						
							SL2.50.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Solyc01g098160.2						
					
						Parent gene annotation
						
							protein_coding
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Solyc01g098160.2_circ_g.1 Solyc01g098160.2_circ_g.3 						
					
						Support reads
						2
					
						Tissues
						fruit
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Solyc01g098160.2.1:5

General Information
CircRNA Name	Solyc01g098160.2_circ_g.2
ID in PlantcircBase	sly_circ_000358
Alias	NA
Organism	Solanum lycopersicum
Position	chr1: 88734969-88739363 JBrowse»
Reference genome	SL2.50.38
Type	ue-circRNA
Identification method	CIRI
Parent gene	Solyc01g098160.2
Parent gene annotation	protein_coding
Parent gene strand	-
Alternative splicing	Solyc01g098160.2_circ_g.1 Solyc01g098160.2_circ_g.3
Support reads	2
Tissues	fruit
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Solyc01g098160.2.1:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GACCCAAAACACACCCCATCTTTCAGGTCTACACTTCATAACTCAACATTCTCATGGATTAACC
AACCAATTTCCACAATCAACTCAGAATCTACAACACcgtctagcttcatcatcccgccgtttgg
catccatttccttggttggaggatattttggaagactagagggatcacaggcatatggctctgt
attgaaaa

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1415
Transcript exons: 88734969-88735069,88737108-88737335,88738053-88738370,88
738484-88738768,88738881-88739363
CGTCTAGCTTCATCATCCCGCCGTTTGGCATCCATTTCCTTGGTTGGAGGATATTTTGGAAGAC
TAGAGGGATCACAGGCATATGGCTCTGTATTGAAAAATTCACTTCGTAATGCATCAGTAGCCGT
CTTGCGTTCTGCGGGATCAATTGCAAGTAATGTATCAATCAGGGGAAGTGAAGACTGAGGAAAA
TCTTTAAAAGTCTCCTTAATGCATCGTCTGTAGGGTTCTCGAGGCTTGAAAAGTGTTGCATTCG
GCAACTTGGACTTCTTCCAGTACTCCTCTGATGGTGAACCACAGAGTTTATATATCTTATGCAA
TTGTTCTACCTCAGTCCGACCAGGCATAATGGGTTTTCCAGCCAATAACTCAGCTAAGATGCAA
CCTGCACTCCATAAATCAATACCTACACCATAATCAGTAGCACCTAGAAGCAGCTCTGGTGGTC
TATACCAGAGAGTAACCACTCGACTAGTCATTTGATGCTTATGAGAAGGATCGAAAATAGTAGC
CAGTCCAAAGTCAGCAATTCTGAGAATGCCAGAATTGTCAAGAAGAAGATTTGACCCCTTAATA
TCGCGATGAAGCACATGACGATTGTGACAATGCTCAAGGCCAGACAACAGCTGATGCATGTAGC
ATTTAACCTGTGCTTCGGTAAACTTGATCTCTGGACTTGCAGCAAGTCCAGCCAAATCATGATC
CATGTACTCAAAGACCAGGTATAAACTACATGACATTCGTGAGGTAACCAAGCCTTCCAATTTG
ATGACATTAGGATGATCTAGTTGTCGCAAAATTATAATTTCTCTAGCCATGAATCTCACACTCT
CAGGTTCTAGATTGTCAAAACGCACTTTCTTTAGAGCAACAATTTTACCAGTAACAGTATCTCT
CGCCTTGTAGACATTACTGTATGTCCCTTGGCCAATCTTATCAATTTTCTCAAAAGTGTCAGCG
CGTCGTGGGAGCCAACCATCAATTGCTTCCCCAACATGAGCAGAGAGCCAGGAAGGCCATCCAG
CAGCAACCTGCTCCCCATGTTTATGCTTAGGTGGATTACTTAATCTTGGATCAGGCTTCGACCT
TCTCTTTTCTTTCCTAGATTTTCCGTCATGCTCCGTCTTGTCATCCTTCTTAGTTTCATCACCT
TCATCGGCTTCCACAACTTCAGTGTCAACAGTTACATTTTCAGCCCCCTTGACCTCAAAAGTTT
CAGTGGATTCAGCGCTAATGCTCTGACTCTTCTTCTCATAATGTGCACCTTCCCTTTTCTCCTC
TCTGCCATTGTGTACTAAGCCTGATGAAGCTTCCCGACCCAAAACACACCCCATCTTTCAGGTC
TACACTTCATAACTCAACATTCTCATGGATTAACCAACCAATTTCCACAATCAACTCAGAATCT
ACAACAC
						
					

						Genomic sequence
						
							CGTCTAGCTTCATCATCCCGCCGTTTGGCATCCATTTCCTTGGTTGGAGGATATTTTGGAAGAC
TAGAGGGATCACAGGCATATGGCTCTGTATTGAAAAACTGCAGAAATTGAACTTTATTAACCAT
AGAAGAAGGCAACAGCATAAGAATACAAGTGAAACACGTTATTTAAAATGATGTGTTCAGGTTA
AGAGAAGACACGGTATATCACAATAACACATGCTATACAAGAACACCAGAAAAAAGAATGACGT
AGTGCTGCACCAAGAAAGAATGACAGTGGGAAAAGTAGTTAAATAGCTCATAACTATTATTTCT
TTTGTTCCTTCAAGCTAAACTATTTGATGTCTTACTTGTCCTACTCCTCTATGTCAATAAAACT
GAAATTACAAATATATTTTGCTTTATCCGTGAACATTAAGGATTATCAAACACAGTTCAAATTG
TACTCCATCCAAATTTTGTTTGGCTCTTTTTGCATATTAAGGGTTGATTTGATCAATTTGGAGC
AAAGAGCCCATTGGGACCAATTAAATGGAAAGAACTGATGTTCAGTTGAAAGAGTGGGAGAAAA
GGAGAAGATGTAGAGCATGGAATGTAGTTTTACTAGCATTAATGTGGGTGGTGTGGACTGTGGA
GAGATAAATAGGGGAGCTTTTGAAGGGGTAGAGTCAAGTTTTTCTCTGTTGAGAAGTAGCGTCC
AATCTCTTGTTTTCTTTTGGTGCACCCATACAAGTTCCAACTGTATAGAAGATTTGATGTTTGT
AGAGAATCATTTCTTTTTGTAGATTCTTTACCTTTTGTGGTATAACCTTCAACCTTTGTACATA
GCCAAGTTTTGGGCCATGTTTATGAATGAGATTACATTTATTTGATCAAGAAAATAATCTATTT
TTCAGAGAAGGGTCAAATTGTCCACTATACAGCTTGAAATTGAGCAATTTGTTTTATGTCAAGT
GTTTGGTCTGATGTTACCCATCTTATTAAAACTAGGTCTCACGAAGCTCCAACCATTAACTAAG
CTCCAGCCTGAGGCTTAAAGAAGCTTGGCAATTTATACTAACTATTCCAAACACCTCAACTCTC
CAGAACAAACTACTGTGTATTTTGATACAAGTGCTTTTAGTTTCAAAAGCTTGGCCAAACAGGC
TACAAACTTGATGACAACAATTATCTTTTAACACTAAATAGATATTCACAACCTAAATGAGCAG
TAGTATAAATTATAATTTACCTCATATCTCAATGTTACCAGTTTCAAAATAAAATACATTGTAA
AAGGTCAGTGGTTCACTAAGCTATGGATATTTGCAAGCAAAGAGTGAACATTTTTTAATAGAGG
GAGTACTGATGGTTATTCTTTTCTTTGAATAGTCAATAGTCTGCATAAGCGAAGTGTAAATTAC
TCACTGCAGACATTTAATACCGTATTTTACTTTTCACCAGCGAACCTGAACTCAAAAACAAGTG
ACAAAAATAACCCAATAGCAAACTAAACACTAAAAAGTTCCAAACGACTGATCACTTGCTAAAA
GTTTTCACCAGAGAATCCAAACTTAAAACATCACAAGTAGCAAATAAATCTGCCAAGGGCTGTA
CTAGAAGTACCGAACGACTGCAGAACTGACTTATTACCAAACCAAAATTATATGGCAAGAATTT
TGTAATAACAAATGGGAGGTGGCAGGTGTCTCGTGGAATTAGTCGAGGTGAGCGAAAGCTGGCC
TGGACACCACGGTCATCAGAAAAAAGTGAGGCTATTGGCAATTTCTCATTTACACCAATACCTT
CAAGCTACAGAGCTTCCTAACATAAAAGTCACAGGTATAGTACCCAAACCCATTTAAACTAGTT
TATATCTCACAGAGAGCATAACTTTGGTACAGCCCTACCTGGTAAGACTTGTGGAAATTTCTTC
TACCACTAGAGAAAGCATAGCAAATACCTCTATTTTAGTATCTATCATGTAATTAGGCTCTTAA
CCTTACTAATCTGTGCCAGCAAAAGGAGTTAATGACCCCAAGATATTATAATTCTTTAAAAAAA
AAAAAAAGCTTTCTTCAAAAGATGGTTGGCAGTGAAAGGAGAACAAAACTACTAATTAGAACAA
GACAATTTGGACACAGAAACTACTCACTTCACTTCGTAATGCATCAGTAGCCGTCTTGCGTTCT
GCGGGATCAATTGCAAGTAATGTATCAATCAGGGGAAGTGAAGACTGAGGAAAATCTTTAAAAG
TCTCCTTAATGCATCGTCTGTAGGGTTCTCGAGGCTTGAAAAGTGTTGCATTCGGCAACTTGGA
CTTCTTCCAGTACTCCTCTGATGGTGAACCACAGAGTTTATATATCTTATGCAATTGTTCTACC
TTAGTGACAGAAAAAATTGCTGTTAATAACTCATGCAGGGAAATAAAAACATTCCTGTGTATTA
ACACATTCCATACAAGCTTAAAGTCAGTTGGGATACTTGTCACAGAAATTCTATAGTTTGTAGC
CTTGGAAGTATCAAAATAAATGCTAATTAAACGATCTCCCAGATAGAGTACTCCTGATTCCAGA
AAAATACAAGAGACAGTCTAAAGCTACTGGCAAGAAACAGAATCAATTTAAAGATAAAAACACA
TACTGTCCACAGTTTTCTTTCAATTTTAGAGACGTAGTATGCAAACATCACCCTTATAAATGTT
GTTAGGTTGTTATCCAATAAGAGCTAGTAAAAACCATTGTTCCTCACAGAATTGATCGCTTTTA
TTCAATTTCCAAAATTGGCAATACTGGTAGAAATGGCACACAGCCTAATCATCCATGGGTCGGA
ATTCAGATACTCTTATCATTGAGACCATCATTCCAAAGATAGTAACCAATTAAAGAGAGTTCAT
TTTTGAAACTGACAATTATAGAGAGTTCACTTTCCCTGAGCATATAGATTATCCTAATGGACTC
TGCTGAATTTCTCATGTTGATAAACTGGGCCTTGTAAATAGTAATAAGTCGCTTTGGGTCTATT
ACAAGAAACCCTTGCAAAACTACAGCAATTTATAACATATTACTACAGAAAATTTATAACAAAC
TACGGCGATTACCTCAGTCCGACCAGGCATAATGGGTTTTCCAGCCAATAACTCAGCTAAGATG
CAACCTGCACTCCATAAATCAATACCTACACCATAATCAGTAGCACCTAGAAGCAGCTCTGGTG
GTCTATACCAGAGAGTAACCACTCGACTAGTCATTTGATGCTTATGAGAAGGATCGAAAATAGT
AGCCAGTCCAAAGTCAGCAATTCTGAGAATGCCAGAATTGTCAAGAAGAAGATTTGACCCCTTA
ATATCGCGATGAAGCACATGACGATTGTGACAATGCTCAAGGCCAGACAACAGCTGATGCATGT
AGCATTTAACCTGCAATAAAAGAACAATAATTAGCAAACTCTAATTCTACAAATGAGATGGATA
TTATCTAACTCGCATCCCTCCTTCTTCAAAGCAGAACTACTACCAGTCAGCATCCTAACCTGTG
CTTCGGTAAACTTGATCTCTGGACTTGCAGCAAGTCCAGCCAAATCATGATCCATGTACTCAAA
GACCAGGTATAAACTACATGACATTCGTGAGGTAACCAAGCCTTCCAATTTGATGACATTAGGA
TGATCTAGTTGTCGCAAAATTATAATTTCTCTAGCCATGAATCTCACACTCTCAGGTTCTAGAT
TGTCAAAACGCACTTTCTTTAGAGCAACAATTTTACCAGTAACAGTATCTCTCGCCTTGTAGAC
ATTACTGTATGTCCCTTGGCCAATCTATTAAGAAAAACAGAGGCAGATTGTTAATCATCAAAAG
CAAAAGTTTAATTCAGGACTCGAGAGAACTTGAAATGTATCAAGGAAAACAAAAAGAAATCTTA
AAAGCTACCTTATCAATTTTCTCAAAAGTGTCAGCGCGTCGTGGGAGCCAACCATCAATTGCTT
CCCCAACATGAGCAGAGAGCCAGGAAGGCCATCCAGCAGCAACCTGCTCCCCATGTTTATGCTT
AGGTGGATTACTTAATCTTGGATCAGGCTTCGACCTTCTCTTTTCTTTCCTAGATTTTCCGTCA
TGCTCCGTCTTGTCATCCTTCTTAGTTTCATCACCTTCATCGGCTTCCACAACTTCAGTGTCAA
CAGTTACATTTTCAGCCCCCTTGACCTCAAAAGTTTCAGTGGATTCAGCGCTAATGCTCTGACT
CTTCTTCTCATAATGTGCACCTTCCCTTTTCTCCTCTCTGCCATTGTGTACTAAGCCTGATGAA
GCTTCCCGACCCAAAACACACCCCATCTTTCAGGTCTACACTTCATAACTCAACATTCTCATGG
ATTAACCAACCAATTTCCACAATCAACTCAGAATCTACAACAC
						
					

			
		

Sequences
Splice junction sequence	GACCCAAAACACACCCCATCTTTCAGGTCTACACTTCATAACTCAACATTCTCATGGATTAACC AACCAATTTCCACAATCAACTCAGAATCTACAACACcgtctagcttcatcatcccgccgtttgg catccatttccttggttggaggatattttggaagactagagggatcacaggcatatggctctgt attgaaaa
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1415 Transcript exons: 88734969-88735069,88737108-88737335,88738053-88738370,88 738484-88738768,88738881-88739363 CGTCTAGCTTCATCATCCCGCCGTTTGGCATCCATTTCCTTGGTTGGAGGATATTTTGGAAGAC TAGAGGGATCACAGGCATATGGCTCTGTATTGAAAAATTCACTTCGTAATGCATCAGTAGCCGT CTTGCGTTCTGCGGGATCAATTGCAAGTAATGTATCAATCAGGGGAAGTGAAGACTGAGGAAAA TCTTTAAAAGTCTCCTTAATGCATCGTCTGTAGGGTTCTCGAGGCTTGAAAAGTGTTGCATTCG GCAACTTGGACTTCTTCCAGTACTCCTCTGATGGTGAACCACAGAGTTTATATATCTTATGCAA TTGTTCTACCTCAGTCCGACCAGGCATAATGGGTTTTCCAGCCAATAACTCAGCTAAGATGCAA CCTGCACTCCATAAATCAATACCTACACCATAATCAGTAGCACCTAGAAGCAGCTCTGGTGGTC TATACCAGAGAGTAACCACTCGACTAGTCATTTGATGCTTATGAGAAGGATCGAAAATAGTAGC CAGTCCAAAGTCAGCAATTCTGAGAATGCCAGAATTGTCAAGAAGAAGATTTGACCCCTTAATA TCGCGATGAAGCACATGACGATTGTGACAATGCTCAAGGCCAGACAACAGCTGATGCATGTAGC ATTTAACCTGTGCTTCGGTAAACTTGATCTCTGGACTTGCAGCAAGTCCAGCCAAATCATGATC CATGTACTCAAAGACCAGGTATAAACTACATGACATTCGTGAGGTAACCAAGCCTTCCAATTTG ATGACATTAGGATGATCTAGTTGTCGCAAAATTATAATTTCTCTAGCCATGAATCTCACACTCT CAGGTTCTAGATTGTCAAAACGCACTTTCTTTAGAGCAACAATTTTACCAGTAACAGTATCTCT CGCCTTGTAGACATTACTGTATGTCCCTTGGCCAATCTTATCAATTTTCTCAAAAGTGTCAGCG CGTCGTGGGAGCCAACCATCAATTGCTTCCCCAACATGAGCAGAGAGCCAGGAAGGCCATCCAG CAGCAACCTGCTCCCCATGTTTATGCTTAGGTGGATTACTTAATCTTGGATCAGGCTTCGACCT TCTCTTTTCTTTCCTAGATTTTCCGTCATGCTCCGTCTTGTCATCCTTCTTAGTTTCATCACCT TCATCGGCTTCCACAACTTCAGTGTCAACAGTTACATTTTCAGCCCCCTTGACCTCAAAAGTTT CAGTGGATTCAGCGCTAATGCTCTGACTCTTCTTCTCATAATGTGCACCTTCCCTTTTCTCCTC TCTGCCATTGTGTACTAAGCCTGATGAAGCTTCCCGACCCAAAACACACCCCATCTTTCAGGTC TACACTTCATAACTCAACATTCTCATGGATTAACCAACCAATTTCCACAATCAACTCAGAATCT ACAACAC
Genomic sequence	CGTCTAGCTTCATCATCCCGCCGTTTGGCATCCATTTCCTTGGTTGGAGGATATTTTGGAAGAC TAGAGGGATCACAGGCATATGGCTCTGTATTGAAAAACTGCAGAAATTGAACTTTATTAACCAT AGAAGAAGGCAACAGCATAAGAATACAAGTGAAACACGTTATTTAAAATGATGTGTTCAGGTTA AGAGAAGACACGGTATATCACAATAACACATGCTATACAAGAACACCAGAAAAAAGAATGACGT AGTGCTGCACCAAGAAAGAATGACAGTGGGAAAAGTAGTTAAATAGCTCATAACTATTATTTCT TTTGTTCCTTCAAGCTAAACTATTTGATGTCTTACTTGTCCTACTCCTCTATGTCAATAAAACT GAAATTACAAATATATTTTGCTTTATCCGTGAACATTAAGGATTATCAAACACAGTTCAAATTG TACTCCATCCAAATTTTGTTTGGCTCTTTTTGCATATTAAGGGTTGATTTGATCAATTTGGAGC AAAGAGCCCATTGGGACCAATTAAATGGAAAGAACTGATGTTCAGTTGAAAGAGTGGGAGAAAA GGAGAAGATGTAGAGCATGGAATGTAGTTTTACTAGCATTAATGTGGGTGGTGTGGACTGTGGA GAGATAAATAGGGGAGCTTTTGAAGGGGTAGAGTCAAGTTTTTCTCTGTTGAGAAGTAGCGTCC AATCTCTTGTTTTCTTTTGGTGCACCCATACAAGTTCCAACTGTATAGAAGATTTGATGTTTGT AGAGAATCATTTCTTTTTGTAGATTCTTTACCTTTTGTGGTATAACCTTCAACCTTTGTACATA GCCAAGTTTTGGGCCATGTTTATGAATGAGATTACATTTATTTGATCAAGAAAATAATCTATTT TTCAGAGAAGGGTCAAATTGTCCACTATACAGCTTGAAATTGAGCAATTTGTTTTATGTCAAGT GTTTGGTCTGATGTTACCCATCTTATTAAAACTAGGTCTCACGAAGCTCCAACCATTAACTAAG CTCCAGCCTGAGGCTTAAAGAAGCTTGGCAATTTATACTAACTATTCCAAACACCTCAACTCTC CAGAACAAACTACTGTGTATTTTGATACAAGTGCTTTTAGTTTCAAAAGCTTGGCCAAACAGGC TACAAACTTGATGACAACAATTATCTTTTAACACTAAATAGATATTCACAACCTAAATGAGCAG TAGTATAAATTATAATTTACCTCATATCTCAATGTTACCAGTTTCAAAATAAAATACATTGTAA AAGGTCAGTGGTTCACTAAGCTATGGATATTTGCAAGCAAAGAGTGAACATTTTTTAATAGAGG GAGTACTGATGGTTATTCTTTTCTTTGAATAGTCAATAGTCTGCATAAGCGAAGTGTAAATTAC TCACTGCAGACATTTAATACCGTATTTTACTTTTCACCAGCGAACCTGAACTCAAAAACAAGTG ACAAAAATAACCCAATAGCAAACTAAACACTAAAAAGTTCCAAACGACTGATCACTTGCTAAAA GTTTTCACCAGAGAATCCAAACTTAAAACATCACAAGTAGCAAATAAATCTGCCAAGGGCTGTA CTAGAAGTACCGAACGACTGCAGAACTGACTTATTACCAAACCAAAATTATATGGCAAGAATTT TGTAATAACAAATGGGAGGTGGCAGGTGTCTCGTGGAATTAGTCGAGGTGAGCGAAAGCTGGCC TGGACACCACGGTCATCAGAAAAAAGTGAGGCTATTGGCAATTTCTCATTTACACCAATACCTT CAAGCTACAGAGCTTCCTAACATAAAAGTCACAGGTATAGTACCCAAACCCATTTAAACTAGTT TATATCTCACAGAGAGCATAACTTTGGTACAGCCCTACCTGGTAAGACTTGTGGAAATTTCTTC TACCACTAGAGAAAGCATAGCAAATACCTCTATTTTAGTATCTATCATGTAATTAGGCTCTTAA CCTTACTAATCTGTGCCAGCAAAAGGAGTTAATGACCCCAAGATATTATAATTCTTTAAAAAAA AAAAAAAGCTTTCTTCAAAAGATGGTTGGCAGTGAAAGGAGAACAAAACTACTAATTAGAACAA GACAATTTGGACACAGAAACTACTCACTTCACTTCGTAATGCATCAGTAGCCGTCTTGCGTTCT GCGGGATCAATTGCAAGTAATGTATCAATCAGGGGAAGTGAAGACTGAGGAAAATCTTTAAAAG TCTCCTTAATGCATCGTCTGTAGGGTTCTCGAGGCTTGAAAAGTGTTGCATTCGGCAACTTGGA CTTCTTCCAGTACTCCTCTGATGGTGAACCACAGAGTTTATATATCTTATGCAATTGTTCTACC TTAGTGACAGAAAAAATTGCTGTTAATAACTCATGCAGGGAAATAAAAACATTCCTGTGTATTA ACACATTCCATACAAGCTTAAAGTCAGTTGGGATACTTGTCACAGAAATTCTATAGTTTGTAGC CTTGGAAGTATCAAAATAAATGCTAATTAAACGATCTCCCAGATAGAGTACTCCTGATTCCAGA AAAATACAAGAGACAGTCTAAAGCTACTGGCAAGAAACAGAATCAATTTAAAGATAAAAACACA TACTGTCCACAGTTTTCTTTCAATTTTAGAGACGTAGTATGCAAACATCACCCTTATAAATGTT GTTAGGTTGTTATCCAATAAGAGCTAGTAAAAACCATTGTTCCTCACAGAATTGATCGCTTTTA TTCAATTTCCAAAATTGGCAATACTGGTAGAAATGGCACACAGCCTAATCATCCATGGGTCGGA ATTCAGATACTCTTATCATTGAGACCATCATTCCAAAGATAGTAACCAATTAAAGAGAGTTCAT TTTTGAAACTGACAATTATAGAGAGTTCACTTTCCCTGAGCATATAGATTATCCTAATGGACTC TGCTGAATTTCTCATGTTGATAAACTGGGCCTTGTAAATAGTAATAAGTCGCTTTGGGTCTATT ACAAGAAACCCTTGCAAAACTACAGCAATTTATAACATATTACTACAGAAAATTTATAACAAAC TACGGCGATTACCTCAGTCCGACCAGGCATAATGGGTTTTCCAGCCAATAACTCAGCTAAGATG CAACCTGCACTCCATAAATCAATACCTACACCATAATCAGTAGCACCTAGAAGCAGCTCTGGTG GTCTATACCAGAGAGTAACCACTCGACTAGTCATTTGATGCTTATGAGAAGGATCGAAAATAGT AGCCAGTCCAAAGTCAGCAATTCTGAGAATGCCAGAATTGTCAAGAAGAAGATTTGACCCCTTA ATATCGCGATGAAGCACATGACGATTGTGACAATGCTCAAGGCCAGACAACAGCTGATGCATGT AGCATTTAACCTGCAATAAAAGAACAATAATTAGCAAACTCTAATTCTACAAATGAGATGGATA TTATCTAACTCGCATCCCTCCTTCTTCAAAGCAGAACTACTACCAGTCAGCATCCTAACCTGTG CTTCGGTAAACTTGATCTCTGGACTTGCAGCAAGTCCAGCCAAATCATGATCCATGTACTCAAA GACCAGGTATAAACTACATGACATTCGTGAGGTAACCAAGCCTTCCAATTTGATGACATTAGGA TGATCTAGTTGTCGCAAAATTATAATTTCTCTAGCCATGAATCTCACACTCTCAGGTTCTAGAT TGTCAAAACGCACTTTCTTTAGAGCAACAATTTTACCAGTAACAGTATCTCTCGCCTTGTAGAC ATTACTGTATGTCCCTTGGCCAATCTATTAAGAAAAACAGAGGCAGATTGTTAATCATCAAAAG CAAAAGTTTAATTCAGGACTCGAGAGAACTTGAAATGTATCAAGGAAAACAAAAAGAAATCTTA AAAGCTACCTTATCAATTTTCTCAAAAGTGTCAGCGCGTCGTGGGAGCCAACCATCAATTGCTT CCCCAACATGAGCAGAGAGCCAGGAAGGCCATCCAGCAGCAACCTGCTCCCCATGTTTATGCTT AGGTGGATTACTTAATCTTGGATCAGGCTTCGACCTTCTCTTTTCTTTCCTAGATTTTCCGTCA TGCTCCGTCTTGTCATCCTTCTTAGTTTCATCACCTTCATCGGCTTCCACAACTTCAGTGTCAA CAGTTACATTTTCAGCCCCCTTGACCTCAAAAGTTTCAGTGGATTCAGCGCTAATGCTCTGACT CTTCTTCTCATAATGTGCACCTTCCCTTTTCTCCTCTCTGCCATTGTGTACTAAGCCTGATGAA GCTTCCCGACCCAAAACACACCCCATCTTTCAGGTCTACACTTCATAACTCAACATTCTCATGG ATTAACCAACCAATTTCCACAATCAACTCAGAATCTACAACAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.533881515

Conservation Information
Conserved circRNAs	NA
PMCS	0.533881515

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							88739253-88737116(+)
88739284-88739350(-)
88737126-88739301(-)
						
						Potential amino acid sequence
						
							MKLPDPKHTPSFRSTLHNSTFSWINQPISTINSESTTPSSFIIPPFGIHFLGWRIFWKTRGITG
IWLCIEKFTS*(+)
MGCVLGREASSGLVHNGREEKREGAHYEKKSQSISAESTETFEVKGAENVTVDTEVVEADEGDE
TKKDDKTEHDGKSRKEKRRSKPDPRLSNPPKHKHGEQVAAGWPSWLSAHVGEAIDGWLPRRADT
FEKIDKIGQGTYSNVYKARDTVTGKIVALKKVRFDNLEPESVRFMAREIIILRQLDHPNVIKLE
GLVTSRMSCSLYLVFEYMDHDLAGLAASPEIKFTEAQVKCYMHQLLSGLEHCHNRHVLHRDIKG
SNLLLDNSGILRIADFGLATIFDPSHKHQMTSRVVTLWYRPPELLLGATDYGVGIDLWSAGCIL
AELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYRRCIKETFKDFPQ
SSLPLIDTLLAIDPAERKTATDALRSEFFNTEPYACDPSSLPKYPPTKEMDAKRRDDEARRCCR
F*(-)
MHYEVNFSIQSHMPVIPLVFQNILQPRKWMPNGGMMKLDGVVDSELIVEIGWLIHENVEL*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	88739253-88737116(+) 88739284-88739350(-) 88737126-88739301(-)
Potential amino acid sequence	MKLPDPKHTPSFRSTLHNSTFSWINQPISTINSESTTPSSFIIPPFGIHFLGWRIFWKTRGITG IWLCIEKFTS(+) MGCVLGREASSGLVHNGREEKREGAHYEKKSQSISAESTETFEVKGAENVTVDTEVVEADEGDE TKKDDKTEHDGKSRKEKRRSKPDPRLSNPPKHKHGEQVAAGWPSWLSAHVGEAIDGWLPRRADT FEKIDKIGQGTYSNVYKARDTVTGKIVALKKVRFDNLEPESVRFMAREIIILRQLDHPNVIKLE GLVTSRMSCSLYLVFEYMDHDLAGLAASPEIKFTEAQVKCYMHQLLSGLEHCHNRHVLHRDIKG SNLLLDNSGILRIADFGLATIFDPSHKHQMTSRVVTLWYRPPELLLGATDYGVGIDLWSAGCIL AELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYRRCIKETFKDFPQ SSLPLIDTLLAIDPAERKTATDALRSEFFNTEPYACDPSSLPKYPPTKEMDAKRRDDEARRCCR F(-) MHYEVNFSIQSHMPVIPLVFQNILQPRKWMPNGGMMKLDGVVDSELIVEIGWLIHENVEL*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zuo et al., 2016

circRNA

Detail information of Solyc01g098160.2_circ_g.2

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