Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | Solyc10g045100.1_circ_ig.4 |
ID in PlantcircBase | sly_circ_003113 |
Alias | NA |
Organism | Solanum lycopersicum |
Position | chr10: 30948599-30953232 JBrowse» |
Reference genome | SL2.50.38 |
Type | ig-circRNA |
Identification method | Segemehl, CIRI |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | Solyc10g045100.1_circ_ig.1 Solyc10g045100.1_circ_ig.2 Solyc10g045100.1_circ_ig.3 |
Support reads | NA |
Tissues | fruit |
Exon boundary | No-No |
Splicing signals | AT-CC |
Number of exons covered | NA |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.104980035 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Tan et al., 2017 |