Plant Circular RNA Database

Detail information of Os01g0208600_circ_g.3

			
						 General Information
					
						CircRNA Name
						Os01g0208600_circ_g.3
					
						ID in PlantcircBase
						osa_circ_000789
					
						Alias
						Os_ciR6552
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr1: 5892755-5897355  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Os01g0208600						
					
						Parent gene annotation
						
							SCAR-like protein 2, Component of the suppressor of cAMP recepto
r/Wiskott-Aldrich syndrome protein family verprolin-homologous (
SCAR/WAVE) complex, Actin organization, Panicle development, Reg
ulation of water loss (Os01t0208600-01);Actin-binding WH2 domain
 containing protein. (Os01t0208600-02);Actin-binding WH2 domain 
containing protein. (Os01t0208600-03)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os01g0208600_circ_g.2 Os01g0208600_circ_g.4 Os01g0208600_circ_g.5 Os01g0208600_circ_g.6 						
					
						Support reads
						2
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os01t0208600-01:6
Os01t0208600-03:2
Os01t0208600-02:3

General Information
CircRNA Name	Os01g0208600_circ_g.3
ID in PlantcircBase	osa_circ_000789
Alias	Os_ciR6552
Organism	Oryza sativa
Position	chr1: 5892755-5897355 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	find_circ
Parent gene	Os01g0208600
Parent gene annotation	SCAR-like protein 2, Component of the suppressor of cAMP recepto r/Wiskott-Aldrich syndrome protein family verprolin-homologous ( SCAR/WAVE) complex, Actin organization, Panicle development, Reg ulation of water loss (Os01t0208600-01);Actin-binding WH2 domain containing protein. (Os01t0208600-02);Actin-binding WH2 domain containing protein. (Os01t0208600-03)
Parent gene strand	+
Alternative splicing	Os01g0208600_circ_g.2 Os01g0208600_circ_g.4 Os01g0208600_circ_g.5 Os01g0208600_circ_g.6
Support reads	2
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os01t0208600-01:6 Os01t0208600-03:2 Os01t0208600-02:3

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TCAGCAGAAGCTGAATGGACATGAAAAGTCAAAAGCAGTAGGCAATGATACTAAAAACTTGGAT
GAAAGGGAGGAGTTGCTTCAACAAATCAGGAGCAAGgctctgattggcatgcacaacttaaaga
tgagcaaaatcacctgctttctagtgatctacctcgatttatgatggattcctatgaagaatgt
cgagaccc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 3470
Transcript exons: 5892755-5892878,5892941-5893073,5893629-5893732,5893867-
5896780,5896876-5896965,5897251-5897355
GCTCTGATTGGCATGCACAACTTAAAGATGAGCAAAATCACCTGCTTTCTAGTGATCTACCTCG
ATTTATGATGGATTCCTATGAAGAATGTCGAGACCCACCACGACTTTACCTTCTTGATAAATTT
GATAATGCTGGAGCTGGGGCTTGTTCGAGGAGACATTCTGATCCATCATACTTCAAGAAAGCAT
GGGATATGATGAGAGCAGACAAGACAGGAAATTTCCAAAGAGAAAAGAAATCTCAGAAAATCAA
GAGAAAAGGATCACGCTTGAGAGAACCGTATCACGGACAAACTACACCCAGGCAGAGGAATGGT
GAATTGCAGCGAGCACTCACCGCTGTTCAGCTTACCAGCAGGCACTTTGCGACTCCTAGTACTG
ATGGCCGGAGCCTTTCAGAGAATAGATCTACATCTGATGTAAGATCTAACCCTGACAATATAAG
CAGATCTTCTTCGTTTAGTTCGAAAGCACGACTGAGTTTCACAGAGCAAGTTCTAGATACAAAG
CCAACTGTAGTTCCTCATGAAAATGGCCATGACAAGCTGTCAAATAATAATCTACACAAGCTTA
GCAATACCCCCTTGCACACACGGCTTAACGGTACCAGTGCAGATGACCTGGGTGATGATTTGAA
GCAAAGTTCCCTGCTAGATGATATGACTGCTAGGTCACCTTCTGTTAAATGGGATGAGAAGGCT
GAAATTACCATGTCTACAACTTCCGTCTACTGTGATGATGTTGTCATGGACAAGGCTGAACATG
TACAATCTAAATGTATTAGCCCTGAGCAGCAAGAAATCGACCATAGGGAGATGGAGACTTTGGA
GCAGCAAGAGGCATTACATCAAAAGGCAAAACAGTTATTAGTGTCATCAGGCTTGAACCACCAT
GATGAAGTCCCCAGTGAAACAGACAACTATGTGGATGCACTTAATACACTTGAATCTGAGACAG
AGACTGAACCCGAGCTTCAAACTAAAAGTCGAGTGAAACCAGTACCTTCTCTCAATGTTGATGT
GCCTCAGGTGGAGCTGATAGATAACATTGTCACAGAGTCTCCTGATTCTTCTGTTGCTGAATTC
CCTGATGCATATCAAAATTCAAGTATGCCTCCTGCTCCTGAGAGCGCAGCTGATTTTCCCAGTT
TGTCAAGTGCAGATGCTCCTGACATTTCAGAGCCAGTATTATCAGGCTATACAGCTAATCCTCA
TCCTGAAGTGTCAGCTATTGCTACTAATACCCCTGTGAGCAATACAGAGGATGCTCCAGGTCCT
TTAGAGATTTCAGAGTCAGCATCACGAGCCTATATAATTACACTTCCTAATCAAAGTTTACCTG
ATTCCAAAGAAATTCCAGACAGTAAGGCAGAAGATGCACCCATAGATTCTCCTGAGAAATTGGA
ACCAGGACCTTCAAGCTATACACCTACAATTCCCATTAAAGAGTCCTCTATTGTCAGTCAAAAT
ACTAATGCAGAAAATGTTTCCGGAGACTGTAGTGAAGGCACTGCTTGTGCTATATCCTATTCCC
AGCATATCATTTCTGATAAGCCAACTAATGAGGTATCTGCTACTAATAGCTCACCTGATGATAC
CTCTAGCGATGAAGATACAGTTGAAAGTGGTGGCATTGTTGAAGTGTCTAATTCACAGCCCATG
CCACTGAATGACTCATTGGAGAACGGATGTGCAACTCAAGGCCTCCCAGCAAATGCCCCTACTA
ATTCTACTGGAGTATCTTCTGTTAAGCTCTGGACTAATGCTGGGCTCTTTGGACTTGAGCCATC
TAAACCTCCAGTATTCGGTGCCCATGATGGTCCAAAGGAGGATACTACACCTGGACACACACAA
CCTCAGCTTTGCCATTCAACTGGGTGCCCCGAAGTTCATTTTTCAAAGCCCACTGAATCAGCAC
AAGTATATGTTCCAAATGGCAATTCGCCAATTACCAGCAGTTTTGTGGGGAAACTTGTTGGTAT
CTGTCCTGGTTCTACAAGCCACAGCTCAGAGACTAATCAATCAACAGTAAGAACACCTGATACT
GTTATTGGTCAAACAGAGGGGTCCACAGGTTGTTCCACATCTTTTGAGCACAGTGATCACAAAA
ATATTATTGGTAAGCAAACTTCAATAAGTGAGCTCCTAGAATCTGAAGACAGTGCTGAAAATGG
TGCTGAAATGTTCTCTAAAACTGACATGACTGGAAGGAATAACATGAATCAGGTGTCTGCATCA
AGCTTTTCAAGCATTGCACAAAGATTTCTTGCTAATACACTTCAGCGAAGAACTCCCAAATACA
CTGATCTTCCTATGTCATCTGTTATAGTTAACACTGATGCAAACGGGACTGATGAATCTACCCA
AATATCTTCTCTAGCCCCCAATGAAACAACATTCGAGGCATCTCAATTTGAGAAGAAAACAGAA
AATGACACAAATGGACTGCCCAAATCGTCACTCTTCTCTAGTAGCCATTACTCTGAGAAATCAT
CTCCGCCGCTTGAGTACATGAAAATATCTTTCCACCCTATGAGTGCATTTGAAATGTCAAAATT
GGACCTAGATTTCTCTGATGAAAATCTTCATGAGAATGCCGATGATATGATGTTACCAACGTTT
CAGTTACTTCCAGGGTCTTCCGTTCCACAGCTTGGTAGTGGTTCTGAATCGGAAGATGATACTT
TTGGCAGATCTTATAGTTATTCTTCGTATGATGATCTAAGTCCACGGTTATATTCAAACTCTGA
GTTGTGGGATCAAGAAGACGCAAATGGATTGGAGGATCATGATATGCATAACAATCCAAATCAG
ATAGGATCCTTCGGAGCACCAATCTCTAGCTTTGTGGAATTTGAGCAGATGGACTTATCTGGTG
CGAAGTCCACTGTATCACTTACAGATCTTGGGGATGATAATGGACTTGGCACGTTAGATTCTCA
TCCTGCTGGAGAACTTCCTAACTTCGATACTTTGATGGCTCATCAAAATGAGGCCTTCATTCCG
CACAATCCAGTAAGTTTATCACCAGATGAAGGTCAGTTGCCTCCACCTCCTCCTCTTCCCCCAA
TGCAATGGAGGACAATGAGACAAGTAGCTTCTGTAGAAGAAGGAAGAGGTTCTGCAGCTAAAGA
AGATATGCTTGAGAGTACCTCAGATCTACCACCAGTACACACTCCTGTTCAGGAAGAACATCTT
CTGCCCATCGCACCACCAGATCAACAAAATCTTCTGCCCATCGCACCACCAGATCAACAAGGGC
ATGCGAAGGAGAATGACAGAAAAGTTGATGGGGTAAAAGAGATAAGCAATCCTCTCGACATTGA
GATCAGAGCAAGCTTGCTTCAGCAAATCAGGGATAAGTCAGGTCAGCAGAAGCTGAATGGACAT
GAAAAGTCAAAAGCAGTAGGCAATGATACTAAAAACTTGGATGAAAGGGAGGAGTTGCTTCAAC
AAATCAGGAGCAAG
						
					

						Genomic sequence
						
							GCTCTGATTGGCATGCACAACTTAAAGATGAGCAAAATCACCTGCTTTCTAGTGATCTACCTCG
ATTTATGATGGATTCCTATGAAGAATGTCGAGACCCACCACGACTTTACCTTCTTGATAAGTAA
GACTTGATTGTTTTCTTTATTGATGCGCTTGTGGTTCCTGAAATGTTTTGTCTTTTAGATTTGA
TAATGCTGGAGCTGGGGCTTGTTCGAGGAGACATTCTGATCCATCATACTTCAAGAAAGCATGG
GATATGATGAGAGCAGACAAGACAGGAAATTTCCAAAGAGAAAAGAAATCTCAGAAAATCAAGG
TTCCGTTATTTTACTTTCTGCATTTCTGCATCAGAGGATCAGTGGCATGCTTGTCTATCTTAGC
AACAGACACATTTAATGGTAGTTAATATGTATAATTATGGTATTGCTGCTCCACTGTACTCTAC
AGGCAAACATATCAAACTGGTACTATCATGTTATGATTTAAACTCAATGATTAGAAATCACCAT
ACCTAGCTCGTGTCAAGATTTGGCAGAAGTCTGAATGTTGTCCTTATGAAGAGATAGGAAATAG
TTATTTAGAGTCACCAAACTTTGTTACTGGTTAATAATCTCGTGGGAACAAGAAATAACCATTT
CCATGAATACATTCATGTGCTAAAATATTTGAAACTCATTTTCTATGGTCATATTCTGCTTGAG
CCTCTGAGTGAATGTTTAGGAATTGCTAGATGTGTTACTGAACTATCATCCATAGCTGTTTCTG
ATATGGAACGGCTGTAGCTAATTGAAGTTAGAATGGCAATTGTAATCTTTTATCATGTTGGTAA
ATATGTGGTGAAAGACTTAATAAATCTTTTGAACTTGGACAGAGAAAAGGATCACGCTTGAGAG
AACCGTATCACGGACAAACTACACCCAGGCAGAGGAATGGTGAATTGCAGCGAGCACTCACCGC
TGTTCAGCTTACCAGCAGGTGCAACACAAATCCCAAATTTGAAGAGACATAAATTGCATATCCT
TGTCACCTTCTCCTCCATGACTATTTTTCTTGTAGTATTTAGTTCATGCATCTCGAACAGCCTT
ATTAGTAATGTGTTTTGTCAGCAGGCACTTTGCGACTCCTAGTACTGATGGCCGGAGCCTTTCA
GAGAATAGATCTACATCTGATGTAAGATCTAACCCTGACAATATAAGCAGATCTTCTTCGTTTA
GTTCGAAAGCACGACTGAGTTTCACAGAGCAAGTTCTAGATACAAAGCCAACTGTAGTTCCTCA
TGAAAATGGCCATGACAAGCTGTCAAATAATAATCTACACAAGCTTAGCAATACCCCCTTGCAC
ACACGGCTTAACGGTACCAGTGCAGATGACCTGGGTGATGATTTGAAGCAAAGTTCCCTGCTAG
ATGATATGACTGCTAGGTCACCTTCTGTTAAATGGGATGAGAAGGCTGAAATTACCATGTCTAC
AACTTCCGTCTACTGTGATGATGTTGTCATGGACAAGGCTGAACATGTACAATCTAAATGTATT
AGCCCTGAGCAGCAAGAAATCGACCATAGGGAGATGGAGACTTTGGAGCAGCAAGAGGCATTAC
ATCAAAAGGCAAAACAGTTATTAGTGTCATCAGGCTTGAACCACCATGATGAAGTCCCCAGTGA
AACAGACAACTATGTGGATGCACTTAATACACTTGAATCTGAGACAGAGACTGAACCCGAGCTT
CAAACTAAAAGTCGAGTGAAACCAGTACCTTCTCTCAATGTTGATGTGCCTCAGGTGGAGCTGA
TAGATAACATTGTCACAGAGTCTCCTGATTCTTCTGTTGCTGAATTCCCTGATGCATATCAAAA
TTCAAGTATGCCTCCTGCTCCTGAGAGCGCAGCTGATTTTCCCAGTTTGTCAAGTGCAGATGCT
CCTGACATTTCAGAGCCAGTATTATCAGGCTATACAGCTAATCCTCATCCTGAAGTGTCAGCTA
TTGCTACTAATACCCCTGTGAGCAATACAGAGGATGCTCCAGGTCCTTTAGAGATTTCAGAGTC
AGCATCACGAGCCTATATAATTACACTTCCTAATCAAAGTTTACCTGATTCCAAAGAAATTCCA
GACAGTAAGGCAGAAGATGCACCCATAGATTCTCCTGAGAAATTGGAACCAGGACCTTCAAGCT
ATACACCTACAATTCCCATTAAAGAGTCCTCTATTGTCAGTCAAAATACTAATGCAGAAAATGT
TTCCGGAGACTGTAGTGAAGGCACTGCTTGTGCTATATCCTATTCCCAGCATATCATTTCTGAT
AAGCCAACTAATGAGGTATCTGCTACTAATAGCTCACCTGATGATACCTCTAGCGATGAAGATA
CAGTTGAAAGTGGTGGCATTGTTGAAGTGTCTAATTCACAGCCCATGCCACTGAATGACTCATT
GGAGAACGGATGTGCAACTCAAGGCCTCCCAGCAAATGCCCCTACTAATTCTACTGGAGTATCT
TCTGTTAAGCTCTGGACTAATGCTGGGCTCTTTGGACTTGAGCCATCTAAACCTCCAGTATTCG
GTGCCCATGATGGTCCAAAGGAGGATACTACACCTGGACACACACAACCTCAGCTTTGCCATTC
AACTGGGTGCCCCGAAGTTCATTTTTCAAAGCCCACTGAATCAGCACAAGTATATGTTCCAAAT
GGCAATTCGCCAATTACCAGCAGTTTTGTGGGGAAACTTGTTGGTATCTGTCCTGGTTCTACAA
GCCACAGCTCAGAGACTAATCAATCAACAGTAAGAACACCTGATACTGTTATTGGTCAAACAGA
GGGGTCCACAGGTTGTTCCACATCTTTTGAGCACAGTGATCACAAAAATATTATTGGTAAGCAA
ACTTCAATAAGTGAGCTCCTAGAATCTGAAGACAGTGCTGAAAATGGTGCTGAAATGTTCTCTA
AAACTGACATGACTGGAAGGAATAACATGAATCAGGTGTCTGCATCAAGCTTTTCAAGCATTGC
ACAAAGATTTCTTGCTAATACACTTCAGCGAAGAACTCCCAAATACACTGATCTTCCTATGTCA
TCTGTTATAGTTAACACTGATGCAAACGGGACTGATGAATCTACCCAAATATCTTCTCTAGCCC
CCAATGAAACAACATTCGAGGCATCTCAATTTGAGAAGAAAACAGAAAATGACACAAATGGACT
GCCCAAATCGTCACTCTTCTCTAGTAGCCATTACTCTGAGAAATCATCTCCGCCGCTTGAGTAC
ATGAAAATATCTTTCCACCCTATGAGTGCATTTGAAATGTCAAAATTGGACCTAGATTTCTCTG
ATGAAAATCTTCATGAGAATGCCGATGATATGATGTTACCAACGTTTCAGTTACTTCCAGGGTC
TTCCGTTCCACAGCTTGGTAGTGGTTCTGAATCGGAAGATGATACTTTTGGCAGATCTTATAGT
TATTCTTCGTATGATGATCTAAGTCCACGGTTATATTCAAACTCTGAGTTGTGGGATCAAGAAG
ACGCAAATGGATTGGAGGATCATGATATGCATAACAATCCAAATCAGATAGGATCCTTCGGAGC
ACCAATCTCTAGCTTTGTGGAATTTGAGCAGATGGACTTATCTGGTGCGAAGTCCACTGTATCA
CTTACAGATCTTGGGGATGATAATGGACTTGGCACGTTAGATTCTCATCCTGCTGGAGAACTTC
CTAACTTCGATACTTTGATGGCTCATCAAAATGAGGCCTTCATTCCGCACAATCCAGTAAGTTT
ATCACCAGATGAAGGTCAGTTGCCTCCACCTCCTCCTCTTCCCCCAATGCAATGGAGGACAATG
AGACAAGTAGCTTCTGTAGAAGAAGGAAGAGGTTCTGCAGCTAAAGAAGATATGCTTGAGAGTA
CCTCAGATCTACCACCAGTACACACTCCTGTTCAGGAAGAACATCTTCTGCCCATCGCACCACC
AGATCAACAAAATCTTCTGCCCATCGCACCACCAGATCAACAAGGGCATGCGAAGGAGGTAGTA
TGTCTCATCTTTAATTGACTCTATTTTGAATAATTCTGTATCAATAATCACTGTCTTTTATTAA
TGATTCATTAACTTGACTTATGCAGAATGACAGAAAAGTTGATGGGGTAAAAGAGATAAGCAAT
CCTCTCGACATTGAGATCAGAGCAAGCTTGCTTCAGCAAATCAGGGATAAGGTTTGCTTCATTC
TTTCTTAAAAAAAAAATCTGTTGTTCTCTATTGTTTCATAGTTTTGTTACTCTTTTGTGTTGAA
ACCTGAGCAATTTTAGAATTTTTAGTTACGAACAGATAGCACCAGAGTATCATGTGACAATATA
TCATGGAGGCTCTGTGCCTTCTTCTTTTGCCAATACAAATATTTTTTTTTCTGATGGTTGTTAT
TTGATTCTTGAACTTGAAAGCTAGTTAGCAAATTTTTGGCATTCAATACTGATATTTTTGTTCA
TTTTAATAACTTGCAGTCAGGTCAGCAGAAGCTGAATGGACATGAAAAGTCAAAAGCAGTAGGC
AATGATACTAAAAACTTGGATGAAAGGGAGGAGTTGCTTCAACAAATCAGGAGCAAG
						
					

			
		

Sequences
Splice junction sequence	TCAGCAGAAGCTGAATGGACATGAAAAGTCAAAAGCAGTAGGCAATGATACTAAAAACTTGGAT GAAAGGGAGGAGTTGCTTCAACAAATCAGGAGCAAGgctctgattggcatgcacaacttaaaga tgagcaaaatcacctgctttctagtgatctacctcgatttatgatggattcctatgaagaatgt cgagaccc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 3470 Transcript exons: 5892755-5892878,5892941-5893073,5893629-5893732,5893867- 5896780,5896876-5896965,5897251-5897355 GCTCTGATTGGCATGCACAACTTAAAGATGAGCAAAATCACCTGCTTTCTAGTGATCTACCTCG ATTTATGATGGATTCCTATGAAGAATGTCGAGACCCACCACGACTTTACCTTCTTGATAAATTT GATAATGCTGGAGCTGGGGCTTGTTCGAGGAGACATTCTGATCCATCATACTTCAAGAAAGCAT GGGATATGATGAGAGCAGACAAGACAGGAAATTTCCAAAGAGAAAAGAAATCTCAGAAAATCAA GAGAAAAGGATCACGCTTGAGAGAACCGTATCACGGACAAACTACACCCAGGCAGAGGAATGGT GAATTGCAGCGAGCACTCACCGCTGTTCAGCTTACCAGCAGGCACTTTGCGACTCCTAGTACTG ATGGCCGGAGCCTTTCAGAGAATAGATCTACATCTGATGTAAGATCTAACCCTGACAATATAAG CAGATCTTCTTCGTTTAGTTCGAAAGCACGACTGAGTTTCACAGAGCAAGTTCTAGATACAAAG CCAACTGTAGTTCCTCATGAAAATGGCCATGACAAGCTGTCAAATAATAATCTACACAAGCTTA GCAATACCCCCTTGCACACACGGCTTAACGGTACCAGTGCAGATGACCTGGGTGATGATTTGAA GCAAAGTTCCCTGCTAGATGATATGACTGCTAGGTCACCTTCTGTTAAATGGGATGAGAAGGCT GAAATTACCATGTCTACAACTTCCGTCTACTGTGATGATGTTGTCATGGACAAGGCTGAACATG TACAATCTAAATGTATTAGCCCTGAGCAGCAAGAAATCGACCATAGGGAGATGGAGACTTTGGA GCAGCAAGAGGCATTACATCAAAAGGCAAAACAGTTATTAGTGTCATCAGGCTTGAACCACCAT GATGAAGTCCCCAGTGAAACAGACAACTATGTGGATGCACTTAATACACTTGAATCTGAGACAG AGACTGAACCCGAGCTTCAAACTAAAAGTCGAGTGAAACCAGTACCTTCTCTCAATGTTGATGT GCCTCAGGTGGAGCTGATAGATAACATTGTCACAGAGTCTCCTGATTCTTCTGTTGCTGAATTC CCTGATGCATATCAAAATTCAAGTATGCCTCCTGCTCCTGAGAGCGCAGCTGATTTTCCCAGTT TGTCAAGTGCAGATGCTCCTGACATTTCAGAGCCAGTATTATCAGGCTATACAGCTAATCCTCA TCCTGAAGTGTCAGCTATTGCTACTAATACCCCTGTGAGCAATACAGAGGATGCTCCAGGTCCT TTAGAGATTTCAGAGTCAGCATCACGAGCCTATATAATTACACTTCCTAATCAAAGTTTACCTG ATTCCAAAGAAATTCCAGACAGTAAGGCAGAAGATGCACCCATAGATTCTCCTGAGAAATTGGA ACCAGGACCTTCAAGCTATACACCTACAATTCCCATTAAAGAGTCCTCTATTGTCAGTCAAAAT ACTAATGCAGAAAATGTTTCCGGAGACTGTAGTGAAGGCACTGCTTGTGCTATATCCTATTCCC AGCATATCATTTCTGATAAGCCAACTAATGAGGTATCTGCTACTAATAGCTCACCTGATGATAC CTCTAGCGATGAAGATACAGTTGAAAGTGGTGGCATTGTTGAAGTGTCTAATTCACAGCCCATG CCACTGAATGACTCATTGGAGAACGGATGTGCAACTCAAGGCCTCCCAGCAAATGCCCCTACTA ATTCTACTGGAGTATCTTCTGTTAAGCTCTGGACTAATGCTGGGCTCTTTGGACTTGAGCCATC TAAACCTCCAGTATTCGGTGCCCATGATGGTCCAAAGGAGGATACTACACCTGGACACACACAA CCTCAGCTTTGCCATTCAACTGGGTGCCCCGAAGTTCATTTTTCAAAGCCCACTGAATCAGCAC AAGTATATGTTCCAAATGGCAATTCGCCAATTACCAGCAGTTTTGTGGGGAAACTTGTTGGTAT CTGTCCTGGTTCTACAAGCCACAGCTCAGAGACTAATCAATCAACAGTAAGAACACCTGATACT GTTATTGGTCAAACAGAGGGGTCCACAGGTTGTTCCACATCTTTTGAGCACAGTGATCACAAAA ATATTATTGGTAAGCAAACTTCAATAAGTGAGCTCCTAGAATCTGAAGACAGTGCTGAAAATGG TGCTGAAATGTTCTCTAAAACTGACATGACTGGAAGGAATAACATGAATCAGGTGTCTGCATCA AGCTTTTCAAGCATTGCACAAAGATTTCTTGCTAATACACTTCAGCGAAGAACTCCCAAATACA CTGATCTTCCTATGTCATCTGTTATAGTTAACACTGATGCAAACGGGACTGATGAATCTACCCA AATATCTTCTCTAGCCCCCAATGAAACAACATTCGAGGCATCTCAATTTGAGAAGAAAACAGAA AATGACACAAATGGACTGCCCAAATCGTCACTCTTCTCTAGTAGCCATTACTCTGAGAAATCAT CTCCGCCGCTTGAGTACATGAAAATATCTTTCCACCCTATGAGTGCATTTGAAATGTCAAAATT GGACCTAGATTTCTCTGATGAAAATCTTCATGAGAATGCCGATGATATGATGTTACCAACGTTT CAGTTACTTCCAGGGTCTTCCGTTCCACAGCTTGGTAGTGGTTCTGAATCGGAAGATGATACTT TTGGCAGATCTTATAGTTATTCTTCGTATGATGATCTAAGTCCACGGTTATATTCAAACTCTGA GTTGTGGGATCAAGAAGACGCAAATGGATTGGAGGATCATGATATGCATAACAATCCAAATCAG ATAGGATCCTTCGGAGCACCAATCTCTAGCTTTGTGGAATTTGAGCAGATGGACTTATCTGGTG CGAAGTCCACTGTATCACTTACAGATCTTGGGGATGATAATGGACTTGGCACGTTAGATTCTCA TCCTGCTGGAGAACTTCCTAACTTCGATACTTTGATGGCTCATCAAAATGAGGCCTTCATTCCG CACAATCCAGTAAGTTTATCACCAGATGAAGGTCAGTTGCCTCCACCTCCTCCTCTTCCCCCAA TGCAATGGAGGACAATGAGACAAGTAGCTTCTGTAGAAGAAGGAAGAGGTTCTGCAGCTAAAGA AGATATGCTTGAGAGTACCTCAGATCTACCACCAGTACACACTCCTGTTCAGGAAGAACATCTT CTGCCCATCGCACCACCAGATCAACAAAATCTTCTGCCCATCGCACCACCAGATCAACAAGGGC ATGCGAAGGAGAATGACAGAAAAGTTGATGGGGTAAAAGAGATAAGCAATCCTCTCGACATTGA GATCAGAGCAAGCTTGCTTCAGCAAATCAGGGATAAGTCAGGTCAGCAGAAGCTGAATGGACAT GAAAAGTCAAAAGCAGTAGGCAATGATACTAAAAACTTGGATGAAAGGGAGGAGTTGCTTCAAC AAATCAGGAGCAAG
Genomic sequence	GCTCTGATTGGCATGCACAACTTAAAGATGAGCAAAATCACCTGCTTTCTAGTGATCTACCTCG ATTTATGATGGATTCCTATGAAGAATGTCGAGACCCACCACGACTTTACCTTCTTGATAAGTAA GACTTGATTGTTTTCTTTATTGATGCGCTTGTGGTTCCTGAAATGTTTTGTCTTTTAGATTTGA TAATGCTGGAGCTGGGGCTTGTTCGAGGAGACATTCTGATCCATCATACTTCAAGAAAGCATGG GATATGATGAGAGCAGACAAGACAGGAAATTTCCAAAGAGAAAAGAAATCTCAGAAAATCAAGG TTCCGTTATTTTACTTTCTGCATTTCTGCATCAGAGGATCAGTGGCATGCTTGTCTATCTTAGC AACAGACACATTTAATGGTAGTTAATATGTATAATTATGGTATTGCTGCTCCACTGTACTCTAC AGGCAAACATATCAAACTGGTACTATCATGTTATGATTTAAACTCAATGATTAGAAATCACCAT ACCTAGCTCGTGTCAAGATTTGGCAGAAGTCTGAATGTTGTCCTTATGAAGAGATAGGAAATAG TTATTTAGAGTCACCAAACTTTGTTACTGGTTAATAATCTCGTGGGAACAAGAAATAACCATTT CCATGAATACATTCATGTGCTAAAATATTTGAAACTCATTTTCTATGGTCATATTCTGCTTGAG CCTCTGAGTGAATGTTTAGGAATTGCTAGATGTGTTACTGAACTATCATCCATAGCTGTTTCTG ATATGGAACGGCTGTAGCTAATTGAAGTTAGAATGGCAATTGTAATCTTTTATCATGTTGGTAA ATATGTGGTGAAAGACTTAATAAATCTTTTGAACTTGGACAGAGAAAAGGATCACGCTTGAGAG AACCGTATCACGGACAAACTACACCCAGGCAGAGGAATGGTGAATTGCAGCGAGCACTCACCGC TGTTCAGCTTACCAGCAGGTGCAACACAAATCCCAAATTTGAAGAGACATAAATTGCATATCCT TGTCACCTTCTCCTCCATGACTATTTTTCTTGTAGTATTTAGTTCATGCATCTCGAACAGCCTT ATTAGTAATGTGTTTTGTCAGCAGGCACTTTGCGACTCCTAGTACTGATGGCCGGAGCCTTTCA GAGAATAGATCTACATCTGATGTAAGATCTAACCCTGACAATATAAGCAGATCTTCTTCGTTTA GTTCGAAAGCACGACTGAGTTTCACAGAGCAAGTTCTAGATACAAAGCCAACTGTAGTTCCTCA TGAAAATGGCCATGACAAGCTGTCAAATAATAATCTACACAAGCTTAGCAATACCCCCTTGCAC ACACGGCTTAACGGTACCAGTGCAGATGACCTGGGTGATGATTTGAAGCAAAGTTCCCTGCTAG ATGATATGACTGCTAGGTCACCTTCTGTTAAATGGGATGAGAAGGCTGAAATTACCATGTCTAC AACTTCCGTCTACTGTGATGATGTTGTCATGGACAAGGCTGAACATGTACAATCTAAATGTATT AGCCCTGAGCAGCAAGAAATCGACCATAGGGAGATGGAGACTTTGGAGCAGCAAGAGGCATTAC ATCAAAAGGCAAAACAGTTATTAGTGTCATCAGGCTTGAACCACCATGATGAAGTCCCCAGTGA AACAGACAACTATGTGGATGCACTTAATACACTTGAATCTGAGACAGAGACTGAACCCGAGCTT CAAACTAAAAGTCGAGTGAAACCAGTACCTTCTCTCAATGTTGATGTGCCTCAGGTGGAGCTGA TAGATAACATTGTCACAGAGTCTCCTGATTCTTCTGTTGCTGAATTCCCTGATGCATATCAAAA TTCAAGTATGCCTCCTGCTCCTGAGAGCGCAGCTGATTTTCCCAGTTTGTCAAGTGCAGATGCT CCTGACATTTCAGAGCCAGTATTATCAGGCTATACAGCTAATCCTCATCCTGAAGTGTCAGCTA TTGCTACTAATACCCCTGTGAGCAATACAGAGGATGCTCCAGGTCCTTTAGAGATTTCAGAGTC AGCATCACGAGCCTATATAATTACACTTCCTAATCAAAGTTTACCTGATTCCAAAGAAATTCCA GACAGTAAGGCAGAAGATGCACCCATAGATTCTCCTGAGAAATTGGAACCAGGACCTTCAAGCT ATACACCTACAATTCCCATTAAAGAGTCCTCTATTGTCAGTCAAAATACTAATGCAGAAAATGT TTCCGGAGACTGTAGTGAAGGCACTGCTTGTGCTATATCCTATTCCCAGCATATCATTTCTGAT AAGCCAACTAATGAGGTATCTGCTACTAATAGCTCACCTGATGATACCTCTAGCGATGAAGATA CAGTTGAAAGTGGTGGCATTGTTGAAGTGTCTAATTCACAGCCCATGCCACTGAATGACTCATT GGAGAACGGATGTGCAACTCAAGGCCTCCCAGCAAATGCCCCTACTAATTCTACTGGAGTATCT TCTGTTAAGCTCTGGACTAATGCTGGGCTCTTTGGACTTGAGCCATCTAAACCTCCAGTATTCG GTGCCCATGATGGTCCAAAGGAGGATACTACACCTGGACACACACAACCTCAGCTTTGCCATTC AACTGGGTGCCCCGAAGTTCATTTTTCAAAGCCCACTGAATCAGCACAAGTATATGTTCCAAAT GGCAATTCGCCAATTACCAGCAGTTTTGTGGGGAAACTTGTTGGTATCTGTCCTGGTTCTACAA GCCACAGCTCAGAGACTAATCAATCAACAGTAAGAACACCTGATACTGTTATTGGTCAAACAGA GGGGTCCACAGGTTGTTCCACATCTTTTGAGCACAGTGATCACAAAAATATTATTGGTAAGCAA ACTTCAATAAGTGAGCTCCTAGAATCTGAAGACAGTGCTGAAAATGGTGCTGAAATGTTCTCTA AAACTGACATGACTGGAAGGAATAACATGAATCAGGTGTCTGCATCAAGCTTTTCAAGCATTGC ACAAAGATTTCTTGCTAATACACTTCAGCGAAGAACTCCCAAATACACTGATCTTCCTATGTCA TCTGTTATAGTTAACACTGATGCAAACGGGACTGATGAATCTACCCAAATATCTTCTCTAGCCC CCAATGAAACAACATTCGAGGCATCTCAATTTGAGAAGAAAACAGAAAATGACACAAATGGACT GCCCAAATCGTCACTCTTCTCTAGTAGCCATTACTCTGAGAAATCATCTCCGCCGCTTGAGTAC ATGAAAATATCTTTCCACCCTATGAGTGCATTTGAAATGTCAAAATTGGACCTAGATTTCTCTG ATGAAAATCTTCATGAGAATGCCGATGATATGATGTTACCAACGTTTCAGTTACTTCCAGGGTC TTCCGTTCCACAGCTTGGTAGTGGTTCTGAATCGGAAGATGATACTTTTGGCAGATCTTATAGT TATTCTTCGTATGATGATCTAAGTCCACGGTTATATTCAAACTCTGAGTTGTGGGATCAAGAAG ACGCAAATGGATTGGAGGATCATGATATGCATAACAATCCAAATCAGATAGGATCCTTCGGAGC ACCAATCTCTAGCTTTGTGGAATTTGAGCAGATGGACTTATCTGGTGCGAAGTCCACTGTATCA CTTACAGATCTTGGGGATGATAATGGACTTGGCACGTTAGATTCTCATCCTGCTGGAGAACTTC CTAACTTCGATACTTTGATGGCTCATCAAAATGAGGCCTTCATTCCGCACAATCCAGTAAGTTT ATCACCAGATGAAGGTCAGTTGCCTCCACCTCCTCCTCTTCCCCCAATGCAATGGAGGACAATG AGACAAGTAGCTTCTGTAGAAGAAGGAAGAGGTTCTGCAGCTAAAGAAGATATGCTTGAGAGTA CCTCAGATCTACCACCAGTACACACTCCTGTTCAGGAAGAACATCTTCTGCCCATCGCACCACC AGATCAACAAAATCTTCTGCCCATCGCACCACCAGATCAACAAGGGCATGCGAAGGAGGTAGTA TGTCTCATCTTTAATTGACTCTATTTTGAATAATTCTGTATCAATAATCACTGTCTTTTATTAA TGATTCATTAACTTGACTTATGCAGAATGACAGAAAAGTTGATGGGGTAAAAGAGATAAGCAAT CCTCTCGACATTGAGATCAGAGCAAGCTTGCTTCAGCAAATCAGGGATAAGGTTTGCTTCATTC TTTCTTAAAAAAAAAATCTGTTGTTCTCTATTGTTTCATAGTTTTGTTACTCTTTTGTGTTGAA ACCTGAGCAATTTTAGAATTTTTAGTTACGAACAGATAGCACCAGAGTATCATGTGACAATATA TCATGGAGGCTCTGTGCCTTCTTCTTTTGCCAATACAAATATTTTTTTTTCTGATGGTTGTTAT TTGATTCTTGAACTTGAAAGCTAGTTAGCAAATTTTTGGCATTCAATACTGATATTTTTGTTCA TTTTAATAACTTGCAGTCAGGTCAGCAGAAGCTGAATGGACATGAAAAGTCAAAAGCAGTAGGC AATGATACTAAAAACTTGGATGAAAGGGAGGAGTTGCTTCAACAAATCAGGAGCAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.238664937

Conservation Information
Conserved circRNAs	NA
PMCS	0.238664937

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							5897301-5892758(+)
5892824-5892823(+)
						
						Potential amino acid sequence
						
							MILKTWMKGRSCFNKSGARL*(+)
MMDSYEECRDPPRLYLLDKFDNAGAGACSRRHSDPSYFKKAWDMMRADKTGNFQREKKSQKIKR
KGSRLREPYHGQTTPRQRNGELQRALTAVQLTSRHFATPSTDGRSLSENRSTSDVRSNPDNISR
SSSFSSKARLSFTEQVLDTKPTVVPHENGHDKLSNNNLHKLSNTPLHTRLNGTSADDLGDDLKQ
SSLLDDMTARSPSVKWDEKAEITMSTTSVYCDDVVMDKAEHVQSKCISPEQQEIDHREMETLEQ
QEALHQKAKQLLVSSGLNHHDEVPSETDNYVDALNTLESETETEPELQTKSRVKPVPSLNVDVP
QVELIDNIVTESPDSSVAEFPDAYQNSSMPPAPESAADFPSLSSADAPDISEPVLSGYTANPHP
EVSAIATNTPVSNTEDAPGPLEISESASRAYIITLPNQSLPDSKEIPDSKAEDAPIDSPEKLEP
GPSSYTPTIPIKESSIVSQNTNAENVSGDCSEGTACAISYSQHIISDKPTNEVSATNSSPDDTS
SDEDTVESGGIVEVSNSQPMPLNDSLENGCATQGLPANAPTNSTGVSSVKLWTNAGLFGLEPSK
PPVFGAHDGPKEDTTPGHTQPQLCHSTGCPEVHFSKPTESAQVYVPNGNSPITSSFVGKLVGIC
PGSTSHSSETNQSTVRTPDTVIGQTEGSTGCSTSFEHSDHKNIIGKQTSISELLESEDSAENGA
EMFSKTDMTGRNNMNQVSASSFSSIAQRFLANTLQRRTPKYTDLPMSSVIVNTDANGTDESTQI
SSLAPNETTFEASQFEKKTENDTNGLPKSSLFSSSHYSEKSSPPLEYMKISFHPMSAFEMSKLD
LDFSDENLHENADDMMLPTFQLLPGSSVPQLGSGSESEDDTFGRSYSYSSYDDLSPRLYSNSEL
WDQEDANGLEDHDMHNNPNQIGSFGAPISSFVEFEQMDLSGAKSTVSLTDLGDDNGLGTLDSHP
AGELPNFDTLMAHQNEAFIPHNPVSLSPDEGQLPPPPPLPPMQWRTMRQVASVEEGRGSAAKED
MLESTSDLPPVHTPVQEEHLLPIAPPDQQNLLPIAPPDQQGHAKENDRKVDGVKEISNPLDIEI
RASLLQQIRDKSGQQKLNGHEKSKAVGNDTKNLDEREELLQQIRSKALIGMHNLKMSKITCFLV
IYLDL*(+)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	5897301-5892758(+) 5892824-5892823(+)
Potential amino acid sequence	MILKTWMKGRSCFNKSGARL(+) MMDSYEECRDPPRLYLLDKFDNAGAGACSRRHSDPSYFKKAWDMMRADKTGNFQREKKSQKIKR KGSRLREPYHGQTTPRQRNGELQRALTAVQLTSRHFATPSTDGRSLSENRSTSDVRSNPDNISR SSSFSSKARLSFTEQVLDTKPTVVPHENGHDKLSNNNLHKLSNTPLHTRLNGTSADDLGDDLKQ SSLLDDMTARSPSVKWDEKAEITMSTTSVYCDDVVMDKAEHVQSKCISPEQQEIDHREMETLEQ QEALHQKAKQLLVSSGLNHHDEVPSETDNYVDALNTLESETETEPELQTKSRVKPVPSLNVDVP QVELIDNIVTESPDSSVAEFPDAYQNSSMPPAPESAADFPSLSSADAPDISEPVLSGYTANPHP EVSAIATNTPVSNTEDAPGPLEISESASRAYIITLPNQSLPDSKEIPDSKAEDAPIDSPEKLEP GPSSYTPTIPIKESSIVSQNTNAENVSGDCSEGTACAISYSQHIISDKPTNEVSATNSSPDDTS SDEDTVESGGIVEVSNSQPMPLNDSLENGCATQGLPANAPTNSTGVSSVKLWTNAGLFGLEPSK PPVFGAHDGPKEDTTPGHTQPQLCHSTGCPEVHFSKPTESAQVYVPNGNSPITSSFVGKLVGIC PGSTSHSSETNQSTVRTPDTVIGQTEGSTGCSTSFEHSDHKNIIGKQTSISELLESEDSAENGA EMFSKTDMTGRNNMNQVSASSFSSIAQRFLANTLQRRTPKYTDLPMSSVIVNTDANGTDESTQI SSLAPNETTFEASQFEKKTENDTNGLPKSSLFSSSHYSEKSSPPLEYMKISFHPMSAFEMSKLD LDFSDENLHENADDMMLPTFQLLPGSSVPQLGSGSESEDDTFGRSYSYSSYDDLSPRLYSNSEL WDQEDANGLEDHDMHNNPNQIGSFGAPISSFVEFEQMDLSGAKSTVSLTDLGDDNGLGTLDSHP AGELPNFDTLMAHQNEAFIPHNPVSLSPDEGQLPPPPPLPPMQWRTMRQVASVEEGRGSAAKED MLESTSDLPPVHTPVQEEHLLPIAPPDQQNLLPIAPPDQQGHAKENDRKVDGVKEISNPLDIEI RASLLQQIRDKSGQQKLNGHEKSKAVGNDTKNLDEREELLQQIRSKALIGMHNLKMSKITCFLV IYLDL(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015

circRNA

Detail information of Os01g0208600_circ_g.3

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