Plant Circular RNA Database

Detail information of Os08g0482100_circ_g.2

			
						 General Information
					
						CircRNA Name
						Os08g0482100_circ_g.2
					
						ID in PlantcircBase
						osa_circ_037395
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr8: 23835077-23838443  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os08g0482100						
					
						Parent gene annotation
						
							LETM1-like domain containing protein. (Os08t0482100-01);Similar 
to predicted protein. (Os08t0482100-02)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							NA						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os08t0482100-02:6
Os08t0482100-01:9

General Information
CircRNA Name	Os08g0482100_circ_g.2
ID in PlantcircBase	osa_circ_037395
Alias	NA
Organism	Oryza sativa
Position	chr8: 23835077-23838443 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os08g0482100
Parent gene annotation	LETM1-like domain containing protein. (Os08t0482100-01);Similar to predicted protein. (Os08t0482100-02)
Parent gene strand	+
Alternative splicing	NA
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os08t0482100-02:6 Os08t0482100-01:9

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CTGCTCATTCTGATGCAGGTATGATATGCCAAAAGACCAAACCTTTCCAGAAGCCAAAGAACAC
TTGGTTGCTAGGACAGAGCTAGCCTCTTTTGACAAGcacatcgaagatttacactctggagaaa
gtatatggattcagattagtatgcagaagtgtggttgatctgaggagtcaaaaatttcatacac
gtgtttat

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1669
Transcript exons: 23835077-23835575,23836144-23836235,23836813-23836977,23
837059-23837446,23837517-23837635,23837767-23837839,2383
7917-23838122,23838212-23838256,23838362-23838443
CACATCGAAGATTTACACTCTGGAGAAAGTATATGGATTCAGATTAGTATGCAGAAGTGTGGTT
GATCTGAGGAGTCAAAAATTTCATACACGTGTTTATAAGAGAAAGAGCTATTTCAGGAGTTCAG
CATCAGAATGTGAGAAGATCATTCACAGTGCTAGATGGCTAGAATTTAGGAGACAGAGGGTAGC
ATTTCAGAGAACTAGAAGGACAATCCATCTTATTCCTTTGGCTTCTCAAGATGATAGCAGTGGT
TTATCTGTTAACGGATCCCCACAAGTTGATTCGGCAAGCGAGATGGATGATATAAGGGTGAAAT
TGGTTAAAGCACTACAAAGCGAGGATATAAGCACTGGCCTTGTCCAATCAATACATGATGCTGC
AAGATCTATTGAATTGGCTTTCTTAGATCACAGCAAATCATCAAAAAACTCTTGGTTTCCAAAG
GAATGGCTTGGTGTGGATAACAATGAATGGATAAAACCACTCTCTTACCAGGCTGCTGTCGGTT
CATTGTTGCAAGCAGTTATTGATGTTTCATCTAGGGGAAATGGCAGAGATAGAGATATCAATGT
ATTTGTTCAGAGGAGTTTATCCCGCCTACTTAGTTCTCTAGAGGGTGCTATCCAAAATGAGCTG
TCGAAAAGGGAACCTACATTGTACCAGTGGTACTCATCTGATCAAAATCCTTTGGTTGTGAGAA
CATTTGTTAACTCTTTTGAAAACGATCCACGGTTTAACTCTGCAACAGCAATATGCCATGAACG
CCAGCAAATGAATACTAGTGAAAGTGACCTTTCTCTACTTATGCTAGGTTTGACATGTCTTGCT
GCTATCACAAAGCTTGGATCAACAAAAGTTTCTTGTCAGCAGTTCTTTTCCATGGTCCCTGATA
TCATTGGTCGATTCATGGATATGCTTCTTGAATTTGTCCCTCTAAGTAAAGCATATACCTTGAC
AAAAGATATTGGTCTTCAGAGAGAATTCCTTTGCAATTTTGGTCCTCGTGCTGCTGACCCTAAG
TTTTCCAGTGATCGTGAAGTTGAGATATCGTTTTGGATTGATCTGGTTCAGAAACAGTTGCTAC
GGGCTCTTGATCGTGAAAAGATATGGTCAAGATTGACAACAAGTGAAAGTATTGAGGTTTTGGA
AAAGGATTTAGCAATTTTTGGGTTTTTCATTGCTTTAGGCAGAAGTACGCAAACATATTTGTCT
TCCAATCATCTTACCAATCTGGATGATTCAATCAATGATATTGTAAGGTATCTTATTGGTGGGA
GTGTGTTATATTATCCACAGTTGTCTTCGATTAGTTCTTATCAGCTGTATGTGGAGGTAGTTTG
CGAAGAGCTCGAGTGGCTTCCATTTTACAGTGGTGATGTGCCAGCTGCAACAATTGAAGGTAGA
GAGGATGTGCATAAAGGAGAAATAATATCAAGAGTGCTAAATGTGTGCTCTTATTGGATGACTA
GTTTTATAAAGTACAGCTCATGGCTTGAGAACCCTTCAAATGTAAAGGCAGCCAGATTTCTGTC
CAAGGGGCATTCCATGTTGAGTGATTGCATGAAGGAACTGGACTTAACAAAGTATGATATGCCA
AAAGACCAAACCTTTCCAGAAGCCAAAGAACACTTGGTTGCTAGGACAGAGCTAGCCTCTTTTG
ACAAG
						
					

						Genomic sequence
						
							CACATCGAAGATTTACACTCTGGAGAAAGTATATGGATTCAGATTAGTATGCAGAAGTGTGGTT
GATCTGAGGAGTCAAAAATTTCATACACGTGTTTATAAGAGAAAGAGCTATTTCAGGAGTTCAG
CATCAGAATGTGAGAAGATCATTCACAGTGCTAGATGGCTAGAATTTAGGAGACAGAGGGTAGC
ATTTCAGAGAACTAGAAGGACAATCCATCTTATTCCTTTGGCTTCTCAAGATGATAGCAGTGGT
TTATCTGTTAACGGATCCCCACAAGTTGATTCGGCAAGCGAGATGGATGATATAAGGGTGAAAT
TGGTTAAAGCACTACAAAGCGAGGATATAAGCACTGGCCTTGTCCAATCAATACATGATGCTGC
AAGATCTATTGAATTGGCTTTCTTAGATCACAGCAAATCATCAAAAAACTCTTGGTTTCCAAAG
GAATGGCTTGGTGTGGATAACAATGAATGGATAAAACCACTCTCTTACCAGGTACAGGACTGAA
CTTTCTTCAGGCATATATCTGCCCATAAAATGATAGTGACCATTATTCATGTCATTGATTAAAT
AGTTTCTCTTGACTTTTCCCTTTTGGCCTTCCACGCAGAAAACTAGTATTGAAATTTTGTAAGC
CAGATTTTATTGCATGCACCCTACTGTTTCCCTTTTTTTGTTTAGAAAAAGAAAAGATGATGTA
GTCAGGATATCATCCATAGAGGTCTTATGAAATATGGATGCCTGTATAGATGAATATGTATGTT
GAACTTGGTAAACTATTAATTGGTTAGCTTTTGTTCACCCCTTTTAGGATATTAGTAGTGCTAC
TCTGCCACCAGAGGAAGTGTTCTGCTCTGGTGTCTGGAGTATTATTTTCATATATGAAGATGCA
GAGTCTTTTAATCAACTTAGAGCCAATCGCGGCAATTGAACCTTCTTTGAGTTGATGTTTATTA
GTTCTCACACATAAATCTTCAGTAAAACAAATATTAGCTGTTGCGTTCTGAATTTTGGTGGCAT
GCAAACTTTTTATTGTCTGGTATCTAAAATAATCTGTTTGCAGGCTGCTGTCGGTTCATTGTTG
CAAGCAGTTATTGATGTTTCATCTAGGGGAAATGGCAGAGATAGAGATATCAATGTATTTGTTC
AGAGGAGGTCTGCCCTCTAGCACTTGCCTTGATTATCATGCCTAATTGCTGACATTATCCTTTT
TCTCCTGGTGTGTTTTTAAGACTACAACTATCTATCATCTTGGAGCCAATTTTGCTTTTTAATA
CCTTAGAGAGCAAATGGTGTGTAATGTACATTTTATGTAGCTTCCTCTGTATATTAAGTTTTCT
TGGAGCTAATTCCTGTCTCATAAGTTGCTTTCCATCTATAGCCTAATTATTAGAGAAATATATT
CCTCCATTTCTTGACTGGTAGATTTCTTAAGTTTTAATGTCAATAAAACATATGCTGTCAGAAG
AGCATGCAAATTAATTGATCCACTTGATTCATGGGAAAAAAAAGTTACTGCTAGAGTCTACAGG
TTTCTGCTGTATTTGCATTTTTGTTGACCCAGAATGAGCCTTCTACTGGATTCAATAGTCAAGC
TTACATGAACATAGTATTGACAGCATGATGAAGCCAAATCAGATCTAACCTCTATGTTGTACAT
AACAGTTCAATTTGTGATTATAGAACATGCCTCTTGGTCTCCTATTTAATCATATTTAATTTTC
TGTTGCAGTTTATCCCGCCTACTTAGTTCTCTAGAGGGTGCTATCCAAAATGAGCTGTCGAAAA
GGGAACCTACATTGTACCAGTGGTACTCATCTGATCAAAATCCTTTGGTTGTGAGAACATTTGT
TAACTCTTTTGAAAACGATCCACGGTTTAACTCTGCAACAGCAATGTAAGTTGTTTACTTCTGT
TGGGCTTCATTTGATAAATGAACTAATACATTAACGGATACCTTTTCTTTTGTTGCTTGCAGAT
GCCATGAACGCCAGCAAATGAATACTAGTGAAAGTGACCTTTCTCTACTTATGCTAGGTTTGAC
ATGTCTTGCTGCTATCACAAAGCTTGGATCAACAAAAGTTTCTTGTCAGCAGTTCTTTTCCATG
GTCCCTGATATCATTGGTCGATTCATGGATATGCTTCTTGAATTTGTCCCTCTAAGTAAAGCAT
ATACCTTGACAAAAGATATTGGTCTTCAGAGAGAATTCCTTTGCAATTTTGGTCCTCGTGCTGC
TGACCCTAAGTTTTCCAGTGATCGTGAAGTTGAGATATCGTTTTGGATTGATCTGGTTCAGAAA
CAGTTGCTACGGGCTCTTGATCGTGAAAAGATATGGTCAAGATTGACAACAAGTGAAAGTATTG
AGGTTGGAACAAAAGATATTTCGTCTAGCTTTATGAATTCTCCTTCCAAAATAACTATTTTCCT
TACTGCAGGTTTTGGAAAAGGATTTAGCAATTTTTGGGTTTTTCATTGCTTTAGGCAGAAGTAC
GCAAACATATTTGTCTTCCAATCATCTTACCAATCTGGATGATTCAATCAATGATATTGTAAGG
TGTGAATGATGCGAATTTTGAATTGCCATTTGCTCGATGAAATTATGTTTCTGTACATAAGCTA
CAGTATAACTGTTTTCTTGCGTAATTATGATGTAGCTCTCACCTTAACAAGCTTACAATCATCC
AGGTATCTTATTGGTGGGAGTGTGTTATATTATCCACAGTTGTCTTCGATTAGTTCTTATCAGC
TGTATGTGGAGGTTAGTATGCAGGCAATACACCGAGCTCTCAATGCTATGCACCTTTTTTGTGT
TTTTATGACCTTTTCACCTTCCAGGTAGTTTGCGAAGAGCTCGAGTGGCTTCCATTTTACAGTG
GTGATGTGCCAGCTGCAACAATTGAAGGTAGAGAGGATGTGCATAAAGGAGAAATAATATCAAG
AGTGCTAAATGTGTGCTCTTATTGGATGACTAGTTTTATAAAGTACAGCTCATGGCTTGAGAAC
CCTTCAAATGTAAAGGCAGCCAGATTTCTGTCCAAGGGGTACATCCAAATTCAGTCATGCTCTC
TCACATTTTGCCGCAGATATGGATGCGAACCAACGTTTCTAATATATGGTCAAATTTTTGTAGG
CATTCCATGTTGAGTGATTGCATGAAGGAACTGGACTTAACAAAGTAAACATATAATTCTGATG
TTTATATTGTTATTTGTTATGTTACTTGGGTATATGTTTGTACAATTGTAAGAATATTATTATT
TATCTGCTCATTCTGATGCAGGTATGATATGCCAAAAGACCAAACCTTTCCAGAAGCCAAAGAA
CACTTGGTTGCTAGGACAGAGCTAGCCTCTTTTGACAAG
						
					

			
		

Sequences
Splice junction sequence	CTGCTCATTCTGATGCAGGTATGATATGCCAAAAGACCAAACCTTTCCAGAAGCCAAAGAACAC TTGGTTGCTAGGACAGAGCTAGCCTCTTTTGACAAGcacatcgaagatttacactctggagaaa gtatatggattcagattagtatgcagaagtgtggttgatctgaggagtcaaaaatttcatacac gtgtttat
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1669 Transcript exons: 23835077-23835575,23836144-23836235,23836813-23836977,23 837059-23837446,23837517-23837635,23837767-23837839,2383 7917-23838122,23838212-23838256,23838362-23838443 CACATCGAAGATTTACACTCTGGAGAAAGTATATGGATTCAGATTAGTATGCAGAAGTGTGGTT GATCTGAGGAGTCAAAAATTTCATACACGTGTTTATAAGAGAAAGAGCTATTTCAGGAGTTCAG CATCAGAATGTGAGAAGATCATTCACAGTGCTAGATGGCTAGAATTTAGGAGACAGAGGGTAGC ATTTCAGAGAACTAGAAGGACAATCCATCTTATTCCTTTGGCTTCTCAAGATGATAGCAGTGGT TTATCTGTTAACGGATCCCCACAAGTTGATTCGGCAAGCGAGATGGATGATATAAGGGTGAAAT TGGTTAAAGCACTACAAAGCGAGGATATAAGCACTGGCCTTGTCCAATCAATACATGATGCTGC AAGATCTATTGAATTGGCTTTCTTAGATCACAGCAAATCATCAAAAAACTCTTGGTTTCCAAAG GAATGGCTTGGTGTGGATAACAATGAATGGATAAAACCACTCTCTTACCAGGCTGCTGTCGGTT CATTGTTGCAAGCAGTTATTGATGTTTCATCTAGGGGAAATGGCAGAGATAGAGATATCAATGT ATTTGTTCAGAGGAGTTTATCCCGCCTACTTAGTTCTCTAGAGGGTGCTATCCAAAATGAGCTG TCGAAAAGGGAACCTACATTGTACCAGTGGTACTCATCTGATCAAAATCCTTTGGTTGTGAGAA CATTTGTTAACTCTTTTGAAAACGATCCACGGTTTAACTCTGCAACAGCAATATGCCATGAACG CCAGCAAATGAATACTAGTGAAAGTGACCTTTCTCTACTTATGCTAGGTTTGACATGTCTTGCT GCTATCACAAAGCTTGGATCAACAAAAGTTTCTTGTCAGCAGTTCTTTTCCATGGTCCCTGATA TCATTGGTCGATTCATGGATATGCTTCTTGAATTTGTCCCTCTAAGTAAAGCATATACCTTGAC AAAAGATATTGGTCTTCAGAGAGAATTCCTTTGCAATTTTGGTCCTCGTGCTGCTGACCCTAAG TTTTCCAGTGATCGTGAAGTTGAGATATCGTTTTGGATTGATCTGGTTCAGAAACAGTTGCTAC GGGCTCTTGATCGTGAAAAGATATGGTCAAGATTGACAACAAGTGAAAGTATTGAGGTTTTGGA AAAGGATTTAGCAATTTTTGGGTTTTTCATTGCTTTAGGCAGAAGTACGCAAACATATTTGTCT TCCAATCATCTTACCAATCTGGATGATTCAATCAATGATATTGTAAGGTATCTTATTGGTGGGA GTGTGTTATATTATCCACAGTTGTCTTCGATTAGTTCTTATCAGCTGTATGTGGAGGTAGTTTG CGAAGAGCTCGAGTGGCTTCCATTTTACAGTGGTGATGTGCCAGCTGCAACAATTGAAGGTAGA GAGGATGTGCATAAAGGAGAAATAATATCAAGAGTGCTAAATGTGTGCTCTTATTGGATGACTA GTTTTATAAAGTACAGCTCATGGCTTGAGAACCCTTCAAATGTAAAGGCAGCCAGATTTCTGTC CAAGGGGCATTCCATGTTGAGTGATTGCATGAAGGAACTGGACTTAACAAAGTATGATATGCCA AAAGACCAAACCTTTCCAGAAGCCAAAGAACACTTGGTTGCTAGGACAGAGCTAGCCTCTTTTG ACAAG
Genomic sequence	CACATCGAAGATTTACACTCTGGAGAAAGTATATGGATTCAGATTAGTATGCAGAAGTGTGGTT GATCTGAGGAGTCAAAAATTTCATACACGTGTTTATAAGAGAAAGAGCTATTTCAGGAGTTCAG CATCAGAATGTGAGAAGATCATTCACAGTGCTAGATGGCTAGAATTTAGGAGACAGAGGGTAGC ATTTCAGAGAACTAGAAGGACAATCCATCTTATTCCTTTGGCTTCTCAAGATGATAGCAGTGGT TTATCTGTTAACGGATCCCCACAAGTTGATTCGGCAAGCGAGATGGATGATATAAGGGTGAAAT TGGTTAAAGCACTACAAAGCGAGGATATAAGCACTGGCCTTGTCCAATCAATACATGATGCTGC AAGATCTATTGAATTGGCTTTCTTAGATCACAGCAAATCATCAAAAAACTCTTGGTTTCCAAAG GAATGGCTTGGTGTGGATAACAATGAATGGATAAAACCACTCTCTTACCAGGTACAGGACTGAA CTTTCTTCAGGCATATATCTGCCCATAAAATGATAGTGACCATTATTCATGTCATTGATTAAAT AGTTTCTCTTGACTTTTCCCTTTTGGCCTTCCACGCAGAAAACTAGTATTGAAATTTTGTAAGC CAGATTTTATTGCATGCACCCTACTGTTTCCCTTTTTTTGTTTAGAAAAAGAAAAGATGATGTA GTCAGGATATCATCCATAGAGGTCTTATGAAATATGGATGCCTGTATAGATGAATATGTATGTT GAACTTGGTAAACTATTAATTGGTTAGCTTTTGTTCACCCCTTTTAGGATATTAGTAGTGCTAC TCTGCCACCAGAGGAAGTGTTCTGCTCTGGTGTCTGGAGTATTATTTTCATATATGAAGATGCA GAGTCTTTTAATCAACTTAGAGCCAATCGCGGCAATTGAACCTTCTTTGAGTTGATGTTTATTA GTTCTCACACATAAATCTTCAGTAAAACAAATATTAGCTGTTGCGTTCTGAATTTTGGTGGCAT GCAAACTTTTTATTGTCTGGTATCTAAAATAATCTGTTTGCAGGCTGCTGTCGGTTCATTGTTG CAAGCAGTTATTGATGTTTCATCTAGGGGAAATGGCAGAGATAGAGATATCAATGTATTTGTTC AGAGGAGGTCTGCCCTCTAGCACTTGCCTTGATTATCATGCCTAATTGCTGACATTATCCTTTT TCTCCTGGTGTGTTTTTAAGACTACAACTATCTATCATCTTGGAGCCAATTTTGCTTTTTAATA CCTTAGAGAGCAAATGGTGTGTAATGTACATTTTATGTAGCTTCCTCTGTATATTAAGTTTTCT TGGAGCTAATTCCTGTCTCATAAGTTGCTTTCCATCTATAGCCTAATTATTAGAGAAATATATT CCTCCATTTCTTGACTGGTAGATTTCTTAAGTTTTAATGTCAATAAAACATATGCTGTCAGAAG AGCATGCAAATTAATTGATCCACTTGATTCATGGGAAAAAAAAGTTACTGCTAGAGTCTACAGG TTTCTGCTGTATTTGCATTTTTGTTGACCCAGAATGAGCCTTCTACTGGATTCAATAGTCAAGC TTACATGAACATAGTATTGACAGCATGATGAAGCCAAATCAGATCTAACCTCTATGTTGTACAT AACAGTTCAATTTGTGATTATAGAACATGCCTCTTGGTCTCCTATTTAATCATATTTAATTTTC TGTTGCAGTTTATCCCGCCTACTTAGTTCTCTAGAGGGTGCTATCCAAAATGAGCTGTCGAAAA GGGAACCTACATTGTACCAGTGGTACTCATCTGATCAAAATCCTTTGGTTGTGAGAACATTTGT TAACTCTTTTGAAAACGATCCACGGTTTAACTCTGCAACAGCAATGTAAGTTGTTTACTTCTGT TGGGCTTCATTTGATAAATGAACTAATACATTAACGGATACCTTTTCTTTTGTTGCTTGCAGAT GCCATGAACGCCAGCAAATGAATACTAGTGAAAGTGACCTTTCTCTACTTATGCTAGGTTTGAC ATGTCTTGCTGCTATCACAAAGCTTGGATCAACAAAAGTTTCTTGTCAGCAGTTCTTTTCCATG GTCCCTGATATCATTGGTCGATTCATGGATATGCTTCTTGAATTTGTCCCTCTAAGTAAAGCAT ATACCTTGACAAAAGATATTGGTCTTCAGAGAGAATTCCTTTGCAATTTTGGTCCTCGTGCTGC TGACCCTAAGTTTTCCAGTGATCGTGAAGTTGAGATATCGTTTTGGATTGATCTGGTTCAGAAA CAGTTGCTACGGGCTCTTGATCGTGAAAAGATATGGTCAAGATTGACAACAAGTGAAAGTATTG AGGTTGGAACAAAAGATATTTCGTCTAGCTTTATGAATTCTCCTTCCAAAATAACTATTTTCCT TACTGCAGGTTTTGGAAAAGGATTTAGCAATTTTTGGGTTTTTCATTGCTTTAGGCAGAAGTAC GCAAACATATTTGTCTTCCAATCATCTTACCAATCTGGATGATTCAATCAATGATATTGTAAGG TGTGAATGATGCGAATTTTGAATTGCCATTTGCTCGATGAAATTATGTTTCTGTACATAAGCTA CAGTATAACTGTTTTCTTGCGTAATTATGATGTAGCTCTCACCTTAACAAGCTTACAATCATCC AGGTATCTTATTGGTGGGAGTGTGTTATATTATCCACAGTTGTCTTCGATTAGTTCTTATCAGC TGTATGTGGAGGTTAGTATGCAGGCAATACACCGAGCTCTCAATGCTATGCACCTTTTTTGTGT TTTTATGACCTTTTCACCTTCCAGGTAGTTTGCGAAGAGCTCGAGTGGCTTCCATTTTACAGTG GTGATGTGCCAGCTGCAACAATTGAAGGTAGAGAGGATGTGCATAAAGGAGAAATAATATCAAG AGTGCTAAATGTGTGCTCTTATTGGATGACTAGTTTTATAAAGTACAGCTCATGGCTTGAGAAC CCTTCAAATGTAAAGGCAGCCAGATTTCTGTCCAAGGGGTACATCCAAATTCAGTCATGCTCTC TCACATTTTGCCGCAGATATGGATGCGAACCAACGTTTCTAATATATGGTCAAATTTTTGTAGG CATTCCATGTTGAGTGATTGCATGAAGGAACTGGACTTAACAAAGTAAACATATAATTCTGATG TTTATATTGTTATTTGTTATGTTACTTGGGTATATGTTTGTACAATTGTAAGAATATTATTATT TATCTGCTCATTCTGATGCAGGTATGATATGCCAAAAGACCAAACCTTTCCAGAAGCCAAAGAA CACTTGGTTGCTAGGACAGAGCTAGCCTCTTTTGACAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_007809* 						
					
						PMCS
						0.330761704

Conservation Information
Conserved circRNAs	osi_circ_007809*
PMCS	0.330761704

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							23835376-23835139(+)
23835083-23838041(-)
						
						Potential amino acid sequence
						
							MDDIRVKLVKALQSEDISTGLVQSIHDAARSIELAFLDHSKSSKNSWFPKEWLGVDNNEWIKPL
SYQAAVGSLLQAVIDVSSRGNGRDRDINVFVQRSLSRLLSSLEGAIQNELSKREPTLYQWYSSD
QNPLVVRTFVNSFENDPRFNSATAICHERQQMNTSESDLSLLMLGLTCLAAITKLGSTKVSCQQ
FFSMVPDIIGRFMDMLLEFVPLSKAYTLTKDIGLQREFLCNFGPRAADPKFSSDREVEISFWID
LVQKQLLRALDREKIWSRLTTSESIEVLEKDLAIFGFFIALGRSTQTYLSSNHLTNLDDSINDI
VRYLIGGSVLYYPQLSSISSYQLYVEVVCEELEWLPFYSGDVPAATIEGREDVHKGEIISRVLN
VCSYWMTSFIKYSSWLENPSNVKAARFLSKGHSMLSDCMKELDLTKYDMPKDQTFPEAKEHLVA
RTELASFDKHIEDLHSGESIWIQISMQKCG*(+)
MCLSKEASSVLATKCSLASGKVWSFGISYFVKSSSFMQSLNMECPLDRNLAAFTFEGFSSHELY
FIKLVIQ*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	23835376-23835139(+) 23835083-23838041(-)
Potential amino acid sequence	MDDIRVKLVKALQSEDISTGLVQSIHDAARSIELAFLDHSKSSKNSWFPKEWLGVDNNEWIKPL SYQAAVGSLLQAVIDVSSRGNGRDRDINVFVQRSLSRLLSSLEGAIQNELSKREPTLYQWYSSD QNPLVVRTFVNSFENDPRFNSATAICHERQQMNTSESDLSLLMLGLTCLAAITKLGSTKVSCQQ FFSMVPDIIGRFMDMLLEFVPLSKAYTLTKDIGLQREFLCNFGPRAADPKFSSDREVEISFWID LVQKQLLRALDREKIWSRLTTSESIEVLEKDLAIFGFFIALGRSTQTYLSSNHLTNLDDSINDI VRYLIGGSVLYYPQLSSISSYQLYVEVVCEELEWLPFYSGDVPAATIEGREDVHKGEIISRVLN VCSYWMTSFIKYSSWLENPSNVKAARFLSKGHSMLSDCMKELDLTKYDMPKDQTFPEAKEHLVA RTELASFDKHIEDLHSGESIWIQISMQKCG(+) MCLSKEASSVLATKCSLASGKVWSFGISYFVKSSSFMQSLNMECPLDRNLAAFTFEGFSSHELY FIKLVIQ(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os08g0482100_circ_g.2

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