Plant Circular RNA Database

Detail information of Os10g0437600_circ_g.2

			
						 General Information
					
						CircRNA Name
						Os10g0437600_circ_g.2
					
						ID in PlantcircBase
						osa_circ_006885
					
						Alias
						Os_ciR6741
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr10: 15674126-15678229  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, find_circ
					
						Parent gene
						
							Os10g0437600						
					
						Parent gene annotation
						
							Similar to Starch synthase II, chloroplast precursor (EC 2.4.1.2
1) (SS II) (GBSSII) (Granule-bound starch synthase II). (Os10t04
37600-00)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os10g0437600_circ_g.3 						
					
						Support reads
						2/1
					
						Tissues
						root/root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os10t0437600-00:5

General Information
CircRNA Name	Os10g0437600_circ_g.2
ID in PlantcircBase	osa_circ_006885
Alias	Os_ciR6741
Organism	Oryza sativa
Position	chr10: 15674126-15678229 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, find_circ
Parent gene	Os10g0437600
Parent gene annotation	Similar to Starch synthase II, chloroplast precursor (EC 2.4.1.2 1) (SS II) (GBSSII) (Granule-bound starch synthase II). (Os10t04 37600-00)
Parent gene strand	+
Alternative splicing	Os10g0437600_circ_g.3
Support reads	2/1
Tissues	root/root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os10t0437600-00:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AATTTATTATCATGCATACATAGATGGTGTGGATTTTGTTTTCATTGACAATCCTATCTTCCAC
CACGTTGAGAATGACATTTATGGCGGAGACCGAACAgcaaggtcccatgtgaatgttggttatg
ggtcgccgctggtgttcccaggtttgaccaaaccggggtcaagcaggtgtctatgcgttgttgg
aatggtcg

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							GCAAGGTCCCATGTGAATGTTGGTTATGGGTCGCCGCTGGTGTTCCCAGGTTTGACCAAACCGG
GGTCAAGCAGGTGTCTATGCGTTGTTGGAATGGTCGGCAATGCAGGGAATCAAGTTGGTGACGA
TAGTGATGATGGAATCAAGGTTACCAATGAGAAGCTTCGTGCTGTTATCCGCAAGAGCAAAGAG
GTGTTGGAGATCCATCGGAATCTACTTGAGAAGGTAGCTGTTCTATAAGTTGTTGCTGGAACAA
ATGTGTTTCTCAATCTTAAAATAAGTTGTCTGTTTAAAGTTATGATTTAGCAGGTTGTCACAAG
CCCACAAAAATGATGAAACTAAAAAGGTTGTAGCATTATTTGTGTGACCTTTCATTTATGTAGA
CAATTTTTGGTTGCAGGTACATAAATTGAAAATACAAGATTACTATGAACTTCCCAAAGTATGA
TATAGTTTTAGTTGTTGGATCACCTATAAAGCTCTCTTATACAAACAAGCGGTAGACATTCATG
TTAGTCAGATTCGTTCTATCCACATACATGCTGTTAGAGCATTTCCTTCCACTGTTGAAGTAAT
AAACATTGTAGTCTCCATTGTTGAAAGATATACCTTTTAGTCTTGGATTTTACATTCTATACCA
TCACGAGACAGTTTAAGTTCTAGCTTCTGAGGAACAAGGCGGTGTAAAGGTAATGGAGGCTCTG
TTAACATCTACCAGTGAGGTCCTTTGCACCATGTTTGATGGAAGCAATTAGGTATTCTACTGAA
GGGCTGATGCACTGAGTTTACTGAAAATGTGTCCTTTTTCATGTTCTTGCTGGAATGTGAAATG
TTACTAAATGTAGCATGCTAATTTCTTAAATGGTTATTATATAGTGGTGATGAGAAAGGCACCC
TGCGAACGACCTTGAATTACAACCTTTTTTTGGGCCATTTTGCAGTTACATTTATGCATGTTGC
TGGCTGTTCACATTAAAACATTACTATATGAAACAGTTCTGGTCCTCCTCTTTTATTGTTTACT
GAAAATGGTGGTTTTGAGTTATGATATGTGGCCAACTTATTCAGATATCGGCATCAGAAAGGAA
GAAGATCACTTCAATTATAGAGGACAGTTCCATTTATAATGAGCAAGATCCATTTGGTCAAAGA
GATAGTTCTTTTTATCATCTTGATGAAGTTCCAGACGATGATGAATTTAGCTATGACCTACAGA
TGTACCTTGATAGACGTCCAGATCAATCTGAAGTTGTTGCAACTCAGGATTATGAGGCACAACT
AAGTCAAATAAGTGAAATGGGACAGTCAGTTGCTGAGGGCACTAGTGATGATCCATCTGCTTCA
GCTGCTGTAGATCTTATCAATATCATATTGGTAGCGGCGGAGTGTGCTCCTTGGTCCAAAACAG
GCAAGATCATAATAGCCACATACCTTCTAATTTTTTCAGTTTCCATGAAAGGACATTGCGGGTT
TAACCTAGTACCTGTAAGTTGGCGGACTGGAGGGTGTGTGGGCTAACACCCAAAATTCCAAATA
CAACATTACATGGTTACATTTCCTGTGTGAGCTGATTTAATTTAAGGACGTGTTGTTTGTGTTC
CTATATTAACCGTTCTTGTTCCGTCAGCCCGTTATGTTTCTCGTGACAAATGTTGATGTAGTCT
GTCTTCATGCCTTTTTTCATTTCTTGATAGTTTCCATCCAGTTACTCACAATTGGCAACTTTAT
AACCTATGTCCTGATGAAGCCTCACTTGAGTCGAAGGCAAAAGTAGGCTAATTTCATTTCTGTA
GCTTCTGTAGAGCTCACACTCAATGATTGAAACATTGGGGTTCGATGGGTGTTACTTTAGGTGT
CAGGGAGAACATAGATGTAGATATATTCATTCCTGCCTGTTGTAGAAGAGCATGCATGCTGTGT
CTTACATCATGAATTTTTCGTGCAATGAAGTCGGCCCAACTAGTCAATATCCCTAAACTTGATC
TAGTAAAGTACAAATGCATCGATGCCCCAAAAAACTACTCCTATATAGTCTATCTATGGCATGT
TGAATTAATTTTCCAAGACTTCAGACATATACACCAGCAACTCCTCAAGCCTAACCATACTATA
TTTGAGAATTATAAGCTACCAAATTAATTCTATATCTTTGCAAATATTACTGAGCATATTGGAC
CTGCTATATGCTATAGAACATTCATTCTATACACTACACAATCACAGGTTAGTCTATTGTTTCA
ACCAGACCTGCTCATAAACCCCCAAGAAAATATTGCCTTGGCCTTGGAAGGCCATGCCAGAGCT
TGGCTTGACACTTCCATGCCTGAAGCCCCCAAAAGAACAGAGAAGTTCCAGTTTATTTAATGTA
CGAATGTCTTTTATTTGTCCCCCCTCACAGGTGCTGGTAGAAGCGTGTGCTGCCCGCATGAGGT
TGAGAGCGTCCGGTCACGCGCCGTGTTCAGGGGGTTTTGGGTTTTCCGTGGGCCGTCTTAACCC
ACCAGTTGAGTTTTTATTGTTTTTAGTGACCTTTTTAGGGCATGAGCTGGACCAACGTACCAAA
AGTAGCCTTGAGTTCACCCCAGTGTTGGGCCTAAGCATGCATGAGTCTAAACATGAACAACTCT
AGATTTACACTCAATTACCCAAACATGAGGTCCATTTACTAGCTTTCGAGTTGATAAAGGAGGG
GGAAGGGAAGATGGTTGATATAAATTCAGGGACTTAGGCAGTTACCCAATTACTATAGCTAAGG
AGAGGATGGTCTATATGAGGGACGGAGGGAGGCAATGGTGGTGGCATGGTCACTTGTCCACCTT
TTTGGGTGGCTGCAATACACAGTAACTCGACTGTTGCTATATAACAAAACTCATTGCCGTGTAT
ATTTGCAAGTATAAATACACCAGTCGCATTCATCTCTCTTCCCCCTCCTTTGACATCTCTTAAT
CTCCTGCAGGTGGGCTTGGAGATGTTGCTGGAGCTTTGCCAAAGGCTTTGGCTAGGAGAGGTCA
CCGTGTCATGGTATGTTTTAATTTTTAAATAAGACTTCCTGAACCAATATTTTTGGATAGACTC
AGTAAGCTAATCACATCTAATAAGTTCTACAAGTCAACACGTGATACAAGCAGAGCAAGATGGC
ATTCGAGTCTACAAGAACTTCAGTTCGCATACGCTGCATATAGTTTAATCATTACTTAGATTGA
CTTGATTGGAGTAACAAACCTCAATAGACAGGAAACTCACAAGTAATCAGTTGTGGCATAATTA
GTTATACAACCTTCTCATATAGAACCAGTTACTACAAAATAATATGATATATTTGGAATAATTG
GGACATGTCAGCAGAACTCACCATATGCCCTATTACATGAATTGGTGTGAAATATTTAAGCAAA
TTTCACGACACAAGTTGTTGGCTAAGGCACATCTATTATGCACTAGAGATTAAAGGACCTAAAT
TCTGAACAGTACACCTTTGCATGTTGGGTTTCAGTATAATAATTGTAAATATAGAGTAGTTTCC
TGGGCTTGAAATAGCTCTGGTACTATGTCCAGAGTTCTAACCTAAACATTTTATCTTGAGAGAA
AATCTTGCCATCTTGCAATAGACAAATAGTTGAAACTGAGTGATGCAGTAGTACAGGTATATGA
CCTTTCTGCAAATTGGCACATTTTCAGGTCCTTAGGTTGATCTCTTCTATGTGTTGCTGCCCCC
TAATTGACAATATAAACTAATATTTTGGTGGTTACATTTGTAGAAGTGCTTGAATAGGAAATAT
GTCTTGTTTCCTTTTTCCTTGAATAGTAGTAACTTGCAATGGGTACATATATTTTATAGGTAGT
AGTGCCAATGTATAAAAACTACGCAGAACCTCAACAGCTAGGAGAGCCAAGGAGATACCAGGTT
GCAGGGCAGGTATATTATTCTGTCATGTCATGAGAACCTTGTAACTTATTGACTATATTCTCGT
TTGAGACTATGTGTACACTGTACAGGATATGGAGGTAATTTATTATCATGCATACATAGATGGT
GTGGATTTTGTTTTCATTGACAATCCTATCTTCCACCACGTTGAGAATGACATTTATGGCGGAG
ACCGAACA
						
					

			
		

Sequences
Splice junction sequence	AATTTATTATCATGCATACATAGATGGTGTGGATTTTGTTTTCATTGACAATCCTATCTTCCAC CACGTTGAGAATGACATTTATGGCGGAGACCGAACAgcaaggtcccatgtgaatgttggttatg ggtcgccgctggtgttcccaggtttgaccaaaccggggtcaagcaggtgtctatgcgttgttgg aatggtcg
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	GCAAGGTCCCATGTGAATGTTGGTTATGGGTCGCCGCTGGTGTTCCCAGGTTTGACCAAACCGG GGTCAAGCAGGTGTCTATGCGTTGTTGGAATGGTCGGCAATGCAGGGAATCAAGTTGGTGACGA TAGTGATGATGGAATCAAGGTTACCAATGAGAAGCTTCGTGCTGTTATCCGCAAGAGCAAAGAG GTGTTGGAGATCCATCGGAATCTACTTGAGAAGGTAGCTGTTCTATAAGTTGTTGCTGGAACAA ATGTGTTTCTCAATCTTAAAATAAGTTGTCTGTTTAAAGTTATGATTTAGCAGGTTGTCACAAG CCCACAAAAATGATGAAACTAAAAAGGTTGTAGCATTATTTGTGTGACCTTTCATTTATGTAGA CAATTTTTGGTTGCAGGTACATAAATTGAAAATACAAGATTACTATGAACTTCCCAAAGTATGA TATAGTTTTAGTTGTTGGATCACCTATAAAGCTCTCTTATACAAACAAGCGGTAGACATTCATG TTAGTCAGATTCGTTCTATCCACATACATGCTGTTAGAGCATTTCCTTCCACTGTTGAAGTAAT AAACATTGTAGTCTCCATTGTTGAAAGATATACCTTTTAGTCTTGGATTTTACATTCTATACCA TCACGAGACAGTTTAAGTTCTAGCTTCTGAGGAACAAGGCGGTGTAAAGGTAATGGAGGCTCTG TTAACATCTACCAGTGAGGTCCTTTGCACCATGTTTGATGGAAGCAATTAGGTATTCTACTGAA GGGCTGATGCACTGAGTTTACTGAAAATGTGTCCTTTTTCATGTTCTTGCTGGAATGTGAAATG TTACTAAATGTAGCATGCTAATTTCTTAAATGGTTATTATATAGTGGTGATGAGAAAGGCACCC TGCGAACGACCTTGAATTACAACCTTTTTTTGGGCCATTTTGCAGTTACATTTATGCATGTTGC TGGCTGTTCACATTAAAACATTACTATATGAAACAGTTCTGGTCCTCCTCTTTTATTGTTTACT GAAAATGGTGGTTTTGAGTTATGATATGTGGCCAACTTATTCAGATATCGGCATCAGAAAGGAA GAAGATCACTTCAATTATAGAGGACAGTTCCATTTATAATGAGCAAGATCCATTTGGTCAAAGA GATAGTTCTTTTTATCATCTTGATGAAGTTCCAGACGATGATGAATTTAGCTATGACCTACAGA TGTACCTTGATAGACGTCCAGATCAATCTGAAGTTGTTGCAACTCAGGATTATGAGGCACAACT AAGTCAAATAAGTGAAATGGGACAGTCAGTTGCTGAGGGCACTAGTGATGATCCATCTGCTTCA GCTGCTGTAGATCTTATCAATATCATATTGGTAGCGGCGGAGTGTGCTCCTTGGTCCAAAACAG GCAAGATCATAATAGCCACATACCTTCTAATTTTTTCAGTTTCCATGAAAGGACATTGCGGGTT TAACCTAGTACCTGTAAGTTGGCGGACTGGAGGGTGTGTGGGCTAACACCCAAAATTCCAAATA CAACATTACATGGTTACATTTCCTGTGTGAGCTGATTTAATTTAAGGACGTGTTGTTTGTGTTC CTATATTAACCGTTCTTGTTCCGTCAGCCCGTTATGTTTCTCGTGACAAATGTTGATGTAGTCT GTCTTCATGCCTTTTTTCATTTCTTGATAGTTTCCATCCAGTTACTCACAATTGGCAACTTTAT AACCTATGTCCTGATGAAGCCTCACTTGAGTCGAAGGCAAAAGTAGGCTAATTTCATTTCTGTA GCTTCTGTAGAGCTCACACTCAATGATTGAAACATTGGGGTTCGATGGGTGTTACTTTAGGTGT CAGGGAGAACATAGATGTAGATATATTCATTCCTGCCTGTTGTAGAAGAGCATGCATGCTGTGT CTTACATCATGAATTTTTCGTGCAATGAAGTCGGCCCAACTAGTCAATATCCCTAAACTTGATC TAGTAAAGTACAAATGCATCGATGCCCCAAAAAACTACTCCTATATAGTCTATCTATGGCATGT TGAATTAATTTTCCAAGACTTCAGACATATACACCAGCAACTCCTCAAGCCTAACCATACTATA TTTGAGAATTATAAGCTACCAAATTAATTCTATATCTTTGCAAATATTACTGAGCATATTGGAC CTGCTATATGCTATAGAACATTCATTCTATACACTACACAATCACAGGTTAGTCTATTGTTTCA ACCAGACCTGCTCATAAACCCCCAAGAAAATATTGCCTTGGCCTTGGAAGGCCATGCCAGAGCT TGGCTTGACACTTCCATGCCTGAAGCCCCCAAAAGAACAGAGAAGTTCCAGTTTATTTAATGTA CGAATGTCTTTTATTTGTCCCCCCTCACAGGTGCTGGTAGAAGCGTGTGCTGCCCGCATGAGGT TGAGAGCGTCCGGTCACGCGCCGTGTTCAGGGGGTTTTGGGTTTTCCGTGGGCCGTCTTAACCC ACCAGTTGAGTTTTTATTGTTTTTAGTGACCTTTTTAGGGCATGAGCTGGACCAACGTACCAAA AGTAGCCTTGAGTTCACCCCAGTGTTGGGCCTAAGCATGCATGAGTCTAAACATGAACAACTCT AGATTTACACTCAATTACCCAAACATGAGGTCCATTTACTAGCTTTCGAGTTGATAAAGGAGGG GGAAGGGAAGATGGTTGATATAAATTCAGGGACTTAGGCAGTTACCCAATTACTATAGCTAAGG AGAGGATGGTCTATATGAGGGACGGAGGGAGGCAATGGTGGTGGCATGGTCACTTGTCCACCTT TTTGGGTGGCTGCAATACACAGTAACTCGACTGTTGCTATATAACAAAACTCATTGCCGTGTAT ATTTGCAAGTATAAATACACCAGTCGCATTCATCTCTCTTCCCCCTCCTTTGACATCTCTTAAT CTCCTGCAGGTGGGCTTGGAGATGTTGCTGGAGCTTTGCCAAAGGCTTTGGCTAGGAGAGGTCA CCGTGTCATGGTATGTTTTAATTTTTAAATAAGACTTCCTGAACCAATATTTTTGGATAGACTC AGTAAGCTAATCACATCTAATAAGTTCTACAAGTCAACACGTGATACAAGCAGAGCAAGATGGC ATTCGAGTCTACAAGAACTTCAGTTCGCATACGCTGCATATAGTTTAATCATTACTTAGATTGA CTTGATTGGAGTAACAAACCTCAATAGACAGGAAACTCACAAGTAATCAGTTGTGGCATAATTA GTTATACAACCTTCTCATATAGAACCAGTTACTACAAAATAATATGATATATTTGGAATAATTG GGACATGTCAGCAGAACTCACCATATGCCCTATTACATGAATTGGTGTGAAATATTTAAGCAAA TTTCACGACACAAGTTGTTGGCTAAGGCACATCTATTATGCACTAGAGATTAAAGGACCTAAAT TCTGAACAGTACACCTTTGCATGTTGGGTTTCAGTATAATAATTGTAAATATAGAGTAGTTTCC TGGGCTTGAAATAGCTCTGGTACTATGTCCAGAGTTCTAACCTAAACATTTTATCTTGAGAGAA AATCTTGCCATCTTGCAATAGACAAATAGTTGAAACTGAGTGATGCAGTAGTACAGGTATATGA CCTTTCTGCAAATTGGCACATTTTCAGGTCCTTAGGTTGATCTCTTCTATGTGTTGCTGCCCCC TAATTGACAATATAAACTAATATTTTGGTGGTTACATTTGTAGAAGTGCTTGAATAGGAAATAT GTCTTGTTTCCTTTTTCCTTGAATAGTAGTAACTTGCAATGGGTACATATATTTTATAGGTAGT AGTGCCAATGTATAAAAACTACGCAGAACCTCAACAGCTAGGAGAGCCAAGGAGATACCAGGTT GCAGGGCAGGTATATTATTCTGTCATGTCATGAGAACCTTGTAACTTATTGACTATATTCTCGT TTGAGACTATGTGTACACTGTACAGGATATGGAGGTAATTTATTATCATGCATACATAGATGGT GTGGATTTTGTTTTCATTGACAATCCTATCTTCCACCACGTTGAGAATGACATTTATGGCGGAG ACCGAACA

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.097100629

Conservation Information
Conserved circRNAs	NA
PMCS	0.097100629

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							15674220-15678226(+)
15678154-15674138(+)
15674139-15678005(-)
						
						Potential amino acid sequence
						
							MVGNAGNQVGDDSDDGIKVTNEKLRAVIRKSKEVLEIHRNLLEKISASERKKITSIIEDSSIYN
EQDPFGQRDSSFYHLDEVPDDDEFSYDLQMYLDRRPDQSEVVATQDYEAQLSQISEMGQSVAEG
TSDDPSASAAVDLINIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVVPMYKNYAEPQ
QLGEPRRYQVAGQDMEVIYYHAYIDGVDFVFIDNPIFHHVENDIYGGDRTARSHVNVGYGSPLV
FPGLTKPGSSRCLCVVGMVGNAGNQVGDDSDDGIKVTNEKLRAVIRKSKEVLEIHRNLLEKISA
SERKKITSIIEDSSIYNEQDPFGQRDSSFYHLDEVPDDDEFSYDLQMYLDRRPDQSEVVATQDY
EAQLSQISEMGQSVAEGTSDDPSASAAVDLINIILVAAECAPWSKTGGLGDVAGALPKALARRG
HRVMVVVPMYKNYAEPQQLGEPRRYQVAGQDMEVIYYHAYIDGVDFVFIDNPIFHHVENDIYGG
DRTARSHVNVGYGSPLVFPGLTKPGSSRCLCVVGMVGNAGNQVGDDSDDGIKVTNEKLRAVIRK
SKEVLEIHRNLLEKISASERKKITSIIEDSSIYNEQDPFGQRDSSFYHLDEVPDDDEFSYDLQM
YLDRRPDQSEVVATQDYEAQLSQISEMGQSVAEGTSDDPSASAAVDLINIILVAAECAPWSKTG
GLGDVAGALPKALARRGHRVMVVVPMYKNYAEPQQLGEPRRYQVAGQDMEVIYYHAYIDGVDFV
FIDNPIFHHVENDIYGGDRTARSHVNVGYGSPLVFPGLTKPGSSRCLCVVGMVGNAGNQVGDDS
DDGIKVTNEKLRAVIRKSKEVLEIHRNLLEKISASERKKITSIIEDSSIYNEQDPFGQRDSSFY
HLDEVPDDDEFSYDLQMYLDRRPDQSEVVATQDYEAQLSQISEMGQSVAEGTSDDPSASAAVDL
INIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVVPMYKNYAEPQQLGEPRRYQVAGQ
DMEVIYYHAYIDGVDFVFIDNPIFHHVENDIYGGDRT(+)
MVWILFSLTILSSTTLRMTFMAETEQQGPM*(+)
MGPCCSVSAINVILNVVEDRIVNENKIHTIYVCMIINYLHILPCNLVSPWLS*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	15674220-15678226(+) 15678154-15674138(+) 15674139-15678005(-)
Potential amino acid sequence	MVGNAGNQVGDDSDDGIKVTNEKLRAVIRKSKEVLEIHRNLLEKISASERKKITSIIEDSSIYN EQDPFGQRDSSFYHLDEVPDDDEFSYDLQMYLDRRPDQSEVVATQDYEAQLSQISEMGQSVAEG TSDDPSASAAVDLINIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVVPMYKNYAEPQ QLGEPRRYQVAGQDMEVIYYHAYIDGVDFVFIDNPIFHHVENDIYGGDRTARSHVNVGYGSPLV FPGLTKPGSSRCLCVVGMVGNAGNQVGDDSDDGIKVTNEKLRAVIRKSKEVLEIHRNLLEKISA SERKKITSIIEDSSIYNEQDPFGQRDSSFYHLDEVPDDDEFSYDLQMYLDRRPDQSEVVATQDY EAQLSQISEMGQSVAEGTSDDPSASAAVDLINIILVAAECAPWSKTGGLGDVAGALPKALARRG HRVMVVVPMYKNYAEPQQLGEPRRYQVAGQDMEVIYYHAYIDGVDFVFIDNPIFHHVENDIYGG DRTARSHVNVGYGSPLVFPGLTKPGSSRCLCVVGMVGNAGNQVGDDSDDGIKVTNEKLRAVIRK SKEVLEIHRNLLEKISASERKKITSIIEDSSIYNEQDPFGQRDSSFYHLDEVPDDDEFSYDLQM YLDRRPDQSEVVATQDYEAQLSQISEMGQSVAEGTSDDPSASAAVDLINIILVAAECAPWSKTG GLGDVAGALPKALARRGHRVMVVVPMYKNYAEPQQLGEPRRYQVAGQDMEVIYYHAYIDGVDFV FIDNPIFHHVENDIYGGDRTARSHVNVGYGSPLVFPGLTKPGSSRCLCVVGMVGNAGNQVGDDS DDGIKVTNEKLRAVIRKSKEVLEIHRNLLEKISASERKKITSIIEDSSIYNEQDPFGQRDSSFY HLDEVPDDDEFSYDLQMYLDRRPDQSEVVATQDYEAQLSQISEMGQSVAEGTSDDPSASAAVDL INIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVVPMYKNYAEPQQLGEPRRYQVAGQ DMEVIYYHAYIDGVDFVFIDNPIFHHVENDIYGGDRT(+) MVWILFSLTILSSTTLRMTFMAETEQQGPM(+) MGPCCSVSAINVILNVVEDRIVNENKIHTIYVCMIINYLHILPCNLVSPWLS(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os10g0437600_circ_g.2

Address

Any questions?

Supported by