Plant Circular RNA Database

Detail information of orai.003G102300_circ_g.1

			
						 General Information
					
						CircRNA Name
						orai.003G102300_circ_g.1
					
						ID in PlantcircBase
						gra_circ_000258
					
						Alias
						Chr03:31238474|31242522
					
						Organism
						
							Gossypium raimondii						
					
						Position
						
							chrChr03: 31238474-31242522  JBrowse»						
					
						Reference genome
						
							Graimondii_221						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Gorai.003G102300						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						-
					
						Alternative splicing
						
							NA						
					
						Support reads
						3
					
						Tissues
						ovule
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Gorai.003G102300.3:7
Gorai.003G102300.2:8
Gorai.003G102300.1:8
Gorai.003G102300.4:8

General Information
CircRNA Name	orai.003G102300_circ_g.1
ID in PlantcircBase	gra_circ_000258
Alias	Chr03:31238474\|31242522
Organism	Gossypium raimondii
Position	chrChr03: 31238474-31242522 JBrowse»
Reference genome	Graimondii_221
Type	ue-circRNA
Identification method	CIRI
Parent gene	Gorai.003G102300
Parent gene annotation	NA
Parent gene strand	-
Alternative splicing	NA
Support reads	3
Tissues	ovule
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Gorai.003G102300.3:7 Gorai.003G102300.2:8 Gorai.003G102300.1:8 Gorai.003G102300.4:8

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CCAAAGACAAATAGGTTGTCACCAACAGTAGTACAACTATGACTATCCCTTGGAATTGGCGGTG
TGCCTTTTGTTGCTAGTAGGCTCCATGTCCGACTAGcttgtgggtcgatagatcagactgtgct
ggatccctcaaacttggagcaggaacttctgtatcatgcaataaataatccttctcatgaacat
cagcttgt

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1340
Transcript exons: 31238474-31238666,31238818-31239001,31239993-31240166,31
240309-31240473,31240703-31240855,31241050-31241202,3124
1494-31241661,31242373-31242522
CTTGTGGGTCGATAGATCAGACTGTGCTGGATCCCTCAAACTTGGAGCAGGAACTTCTGTATCA
TGCAATAAATAATCCTTCTCATGAACATCAGCTTGTTTATGATCTCCAGAATCCTGCCTCACAC
TTCTTGATTTACTGTCGCAATCACCGTTTAGTACAGTACCCCCAACTTCCACAGAAGTCCTTTT
TCTGCTGGGATTATGATTGTGTACATGTACAGAGCTAGGTGTGTTTGCAAAAAGTATTCCTCGA
AGCGGCTTCCCATCTATAATAGTCTCAATAGTATATCCATGTGGGAAGCTCTCAGTAACCTTAG
CTCGAAATGTCTTCTTTCCTTGATGCAGGACTTGGTTTAATGGAAAATTTTCTCTTCTTGGTTG
GCCATAACTAGATAAAGGAATGGGTTGGTTCACGTCATTGCTGACTTCAATTCTAACAAGAGCT
TTATCTTGTGCAAGATTGCTAAGATTTTGTTCTTGACACTTAAGCTTTAGCTGCTTTCTCAACG
ATAACTTCTCTAGCTTCCTTTCATCTCGTACAATAAGTCCTGTGTGCAAGTAGTACATGTCATC
CAATGCCTCAAGGGTCTTATTGCACCCACCAATAAACACAAGAACACCACTCTTCAGGGGATCC
AAACAATCCCCAGCAACAGAAAATCGAGCAGAAGGGCCATCACCCATAGTTATCACCTTGGTCC
AAATGCCAGTATCAACATCAAGCATGTAGAGATCATCATAAAGATTCTGAGCGTCTGTAAATCC
CCCAAAAACAAACAAGTTCTTGCCAAAAGCAACAGTAGAGTGGCCAGCACGAGGTGTCAACATC
TGGCCTGAGGTAATCAACTCTTTCCATGCAAGAGTATCTGCATCCAGGATATGGACATCAGACA
AATAGTAATCATGCCCATCTTCACCACCGATCACAATAATTTTATTCTTCCAAGATGAGCAAGT
ATGGCTATCACGGGCAGATGGTGGGTTCCCCAATGTTGCAGCACGTTTCCAGACAAAGGTCTCT
GTATTTAAAATATAGAGGTCATTGTAATAAATTTCTTCATTGTTATCAGAAGACTTTCCGCAGC
CACCAAATATGAAGAGTCGTTTACCAACAAGAGCTGCGCTATGACCCTCACGTGCCTCTGGCCC
TTCACCTCTTACACTTGGACAAATCCATGTGCATGTTGCAGTGTCTAATATATGCAGATCCTTG
AGAGGATTCATCCCATCAGTACCACCAAAGACAAATAGGTTGTCACCAACAGTAGTACAACTAT
GACTATCCCTTGGAATTGGCGGTGTGCCTTTTGTTGCTAGTAGGCTCCATGTCCGACTAG
						
					

						Genomic sequence
						
							CTTGTGGGTCGATAGATCAGACTGTGCTGGATCCCTCAAACTTGGAGCAGGAACTTCTGTATCA
TGCAATAAATAATCCTTCTCATGAACATCAGCTTGTTTATGATCTCCAGAATCCTGCCTCACAC
TTCTTGATTTACTGTCGCAATCACCGTTTAGTACAGTACCCCCAACTTCCACAGAAGTCCTTTT
TCTGAAATGAGTACGTAATACTAAGACAAGCCAAGAGGACCATAGAATTTATACAGCACCTGAT
GCTGGTTAAACCAGAATTATCCTAAAATAATGTTGCATCGATGACCAATGCTGGTTAAAGGAGA
AAGGATTCAACAAGAAATTTCTACCTGCTGGGATTATGATTGTGTACATGTACAGAGCTAGGTG
TGTTTGCAAAAAGTATTCCTCGAAGCGGCTTCCCATCTATAATAGTCTCAATAGTATATCCATG
TGGGAAGCTCTCAGTAACCTTAGCTCGAAATGTCTTCTTTCCTTGATGCAGGACTTGGTTTAAT
GGAAAATTTTCTCTTCCTGCAGAATTGGATAGTACCATAAGTGCACAGAAGATAACACTTTTCA
TACTAATGAGGCAATGTTCTATTGGCTGTTTACCAACTAAATAGAAACTAATAAAATGTTCATT
GAAACCAAAGTTTAGGTTAGGTTTACAAGAACATCTCACCACCATGCAAACTGCAGAGTATAGC
ACAAAACATAAGTAATAAGTAATAACTAACCCAAAAGTCTGGAAATCTGTTTTTATAAGTAACA
AGTAATCCAAAAGTCAGAAGGTCTGCTTTTATTTTCTAAAGCTTATGTTTGGTGCTAAGTACAA
AGTAAAACATAAGTAACAAGTAACCCAAAAGTCTGTTTTTATCTTCTAAACTTTATTTTTTGTG
CAAAGTACAGAAAAAACCTAAGTAACAAGTAACACAAAGTCCGTTTTTATTTTCTATTATTACA
GATGAAAAGACGAGCAAGATACAATAGCCAACCACACAAAGGCACGTCCATAGTTCAAAGACTA
ATTTCTTTGAGTGTGCCTAGATGTTTGGAGGAACAGGGGGTGAGGTAAACCTAAGTAACAAGTA
ACACAAAGTCCGTTTTTATTTTCTATTATTACAGATGAAAAGACAAGCAAGATACAATAGCCAA
CCACACAAAGGCACGTCCATAGTTCAAAGACTAATTTCTTTGAGTGTGCCTGGGTGTTTGGAGG
AACAGGGGGTGAGGTGAGGGCTTAGTGATATATGGATAAGACTAAGAACTCGAGGGAAAAAAAA
CTTAAAGAATGTATTAATATAATTCTGAGAAGAGCAACATAGTTCAAAGACTAATTTCTTTGTG
TGTGCCTGGGTATTTGGAGGAACAGGGGGTGAGGTGAGGGCTTAGTGATATATGGATAAGACTA
AGAACTCGAGGGAAAAAAAAACTTAAAGAATGTATTAATATAACTCTGAGAAGAGCAACATAGT
GGTTATAAAATATACAAATCGGTCAGAAAGTGAGAAAGAGTTCTTACTTGGTTGGCCATAACTA
GATAAAGGAATGGGTTGGTTCACGTCATTGCTGACTTCAATTCTAACAAGAGCTTTATCTTGTG
CAAGATTGCTAAGATTTTGTTCTTGACACTTAAGCTTTAGCTGCTTTCTCAACGATAACTTCTC
TAGCTTCCTTTCATCTCGTACAATAAGTCCTGGGAGTCACATTAATCAGAACTGATATTCAGCT
GAAGGCTGGCAAAAGATTTACGGAGTTCCCCGAACCAAATCAAATATAAAAAGCAGCTTAGCAT
GAAACGTTTTTAAATCAAGGTAAATGGTATATTTAGATTAAACCTGTGTGCAAGTAGTACATGT
CATCCAATGCCTCAAGGGTCTTATTGCACCCACCAATAAACACAAGAACACCACTCTTCAGGGG
ATCCAAACAATCCCCAGCAACAGAAAATCGAGCAGAAGGGCCATCACCCATAGTTATCACCTTG
GTCCAAATGCCAGTATCTGCACCATTAGAAACATAAAATATGAACTAACCACACTTGCACATTA
TTTCATCAGAAAGCAACCCTTTTGGACCACAAAGGAAAGAAATATAAACAAATAAATAACTAAA
ATATTGCAATTTCCCACAACCTTCAACCTCAGATTTCTAAAACAGACTCACTAGATGATTTCAA
GAAATAGAAAATTTGATTGAAGATAACACAATCAACAATTAAGTAAGACGTACCAACATCAAGC
ATGTAGAGATCATCATAAAGATTCTGAGCGTCTGTAAATCCCCCAAAAACAAACAAGTTCTTGC
CAAAAGCAACAGTAGAGTGGCCAGCACGAGGTGTCAACATCTGGCCTGAGGTAATCAACTCTTT
CCATGCAAGAGTATCTAGCAAAAATAAGAAAAATTCCAAGAAAAAAATTAAGCAGACATAAAAA
TCCAAGATTCATGTATTTTCAAGCAATGAAAACATGTAAAGTGTACAGTAAGTTGAATATAACA
AGTTAACAACCAAAGACGTGTATGAAAGCATAGAAGAACAGGTAAATGCATGGACTCATGGGAA
AGAAGAAAAATCAAACCTGCATCCAGGATATGGACATCAGACAAATAGTAATCATGCCCATCTT
CACCACCGATCACAATAATTTTATTCTTCCAAGATGAGCAAGTATGGCTATCACGGGCAGATGG
TGGGTTCCCCAATGTTGCAGCACGTTTCCAGACAAAGGTCTCTACAAGCAAAAAGATGAGGGGA
AAATAAGAATTAGTATAAAACCCCAGAAAGAAAGAATAATAATAAAGAAACTTGTCCCTTCAGC
CTAAGCTTTCCAAGACATTTTCAAAGCAAAAAAGATACCAAACAAAACTCAATTCCAATTTTTG
AAGTGCAACAAGGAGTCTGGCAAATGCGTGAATTTGTAATTTTACCCCTCTATGGTGACATAAA
TAGAGATCACATTAATCAAACTGAAATCAGCCAATGCAATAAGAAGTTAAGAATAAAGCATTGT
CAAGATATTTACCTGTATTTAAAATATAGAGGTCATTGTAATAAATTTCTTCATTGTTATCAGA
AGACTTTCCGCAGCCACCAAATATGAAGAGTCGTTTACCAACAAGAGCTGCGCTATGACCCTCA
CGTGCCTCTGGCCCTTCACCTCTTACACTTGGACAAATCCATGTGCATGTTGCTGCAAGAAAAG
CATGTAATGAGTTAATGTATTTCCACTATTGATAAGAAGCCCTCTGATGGTTTTCAAGGATGCC
TTGGGAAAAATAACAGCAAACCACTTAATTTTATTTCCATGAAATGACTGAAAGGCAAAGGATT
ATGATAACTTAATAATTAAAGTAACAAAAAAGAAATGGAAATTTAACTTCCTGGAATCGCTTCA
ATAGCCATCTAGTAATTGCCCTTAAGTGCCTCCCCATTTCTCTCTCACTCCGAATATATATAGA
GCTTCATTTTTAAATATATAATAAAATAACCATTAATTCATAAAACTGGTTCTTTATTAACCCT
GTAGGATAGAAATAAAGAGCTTCAGAGTACATGACTGAGAATACAGTTCCCTCAGAGTTATGAG
TGTCCAAAAATTACATGAAGACCATCTCAACAAGTTTTGTGATTATCTCCAAAGAACATTACTT
CCTATAACAAAATTACATGAAGACAATCTCAACGAGTTTTGTGACTATCTCCAAAGAACATTAA
TTCCTACAACAAACTTAAAAGGGAAAAATATGTTGATTCTGTCACTGGTTCTAAAGTAGTATCA
CCCAACCATTCCACTTAAGCAAAATGATATCTTTCATGGAATTTGAAAGGAAAATCAAGGCAAA
TGCGGATAATGGGTAATAAGAGGTGAACAAAAGGAAATCGAATGTGAGGAATAACTCACCAGTG
TCTAATATATGCAGATCCTTGAGAGGATTCATCCCATCAGTACCACCAAAGACAAATAGGTTGT
CACCAACAGTAGTACAACTATGACTATCCCTTGGAATTGGCGGTGTGCCTTTTGTTGCTAGTAG
GCTCCATGTCCGACTAG
						
					

			
		

Sequences
Splice junction sequence	CCAAAGACAAATAGGTTGTCACCAACAGTAGTACAACTATGACTATCCCTTGGAATTGGCGGTG TGCCTTTTGTTGCTAGTAGGCTCCATGTCCGACTAGcttgtgggtcgatagatcagactgtgct ggatccctcaaacttggagcaggaacttctgtatcatgcaataaataatccttctcatgaacat cagcttgt
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1340 Transcript exons: 31238474-31238666,31238818-31239001,31239993-31240166,31 240309-31240473,31240703-31240855,31241050-31241202,3124 1494-31241661,31242373-31242522 CTTGTGGGTCGATAGATCAGACTGTGCTGGATCCCTCAAACTTGGAGCAGGAACTTCTGTATCA TGCAATAAATAATCCTTCTCATGAACATCAGCTTGTTTATGATCTCCAGAATCCTGCCTCACAC TTCTTGATTTACTGTCGCAATCACCGTTTAGTACAGTACCCCCAACTTCCACAGAAGTCCTTTT TCTGCTGGGATTATGATTGTGTACATGTACAGAGCTAGGTGTGTTTGCAAAAAGTATTCCTCGA AGCGGCTTCCCATCTATAATAGTCTCAATAGTATATCCATGTGGGAAGCTCTCAGTAACCTTAG CTCGAAATGTCTTCTTTCCTTGATGCAGGACTTGGTTTAATGGAAAATTTTCTCTTCTTGGTTG GCCATAACTAGATAAAGGAATGGGTTGGTTCACGTCATTGCTGACTTCAATTCTAACAAGAGCT TTATCTTGTGCAAGATTGCTAAGATTTTGTTCTTGACACTTAAGCTTTAGCTGCTTTCTCAACG ATAACTTCTCTAGCTTCCTTTCATCTCGTACAATAAGTCCTGTGTGCAAGTAGTACATGTCATC CAATGCCTCAAGGGTCTTATTGCACCCACCAATAAACACAAGAACACCACTCTTCAGGGGATCC AAACAATCCCCAGCAACAGAAAATCGAGCAGAAGGGCCATCACCCATAGTTATCACCTTGGTCC AAATGCCAGTATCAACATCAAGCATGTAGAGATCATCATAAAGATTCTGAGCGTCTGTAAATCC CCCAAAAACAAACAAGTTCTTGCCAAAAGCAACAGTAGAGTGGCCAGCACGAGGTGTCAACATC TGGCCTGAGGTAATCAACTCTTTCCATGCAAGAGTATCTGCATCCAGGATATGGACATCAGACA AATAGTAATCATGCCCATCTTCACCACCGATCACAATAATTTTATTCTTCCAAGATGAGCAAGT ATGGCTATCACGGGCAGATGGTGGGTTCCCCAATGTTGCAGCACGTTTCCAGACAAAGGTCTCT GTATTTAAAATATAGAGGTCATTGTAATAAATTTCTTCATTGTTATCAGAAGACTTTCCGCAGC CACCAAATATGAAGAGTCGTTTACCAACAAGAGCTGCGCTATGACCCTCACGTGCCTCTGGCCC TTCACCTCTTACACTTGGACAAATCCATGTGCATGTTGCAGTGTCTAATATATGCAGATCCTTG AGAGGATTCATCCCATCAGTACCACCAAAGACAAATAGGTTGTCACCAACAGTAGTACAACTAT GACTATCCCTTGGAATTGGCGGTGTGCCTTTTGTTGCTAGTAGGCTCCATGTCCGACTAG
Genomic sequence	CTTGTGGGTCGATAGATCAGACTGTGCTGGATCCCTCAAACTTGGAGCAGGAACTTCTGTATCA TGCAATAAATAATCCTTCTCATGAACATCAGCTTGTTTATGATCTCCAGAATCCTGCCTCACAC TTCTTGATTTACTGTCGCAATCACCGTTTAGTACAGTACCCCCAACTTCCACAGAAGTCCTTTT TCTGAAATGAGTACGTAATACTAAGACAAGCCAAGAGGACCATAGAATTTATACAGCACCTGAT GCTGGTTAAACCAGAATTATCCTAAAATAATGTTGCATCGATGACCAATGCTGGTTAAAGGAGA AAGGATTCAACAAGAAATTTCTACCTGCTGGGATTATGATTGTGTACATGTACAGAGCTAGGTG TGTTTGCAAAAAGTATTCCTCGAAGCGGCTTCCCATCTATAATAGTCTCAATAGTATATCCATG TGGGAAGCTCTCAGTAACCTTAGCTCGAAATGTCTTCTTTCCTTGATGCAGGACTTGGTTTAAT GGAAAATTTTCTCTTCCTGCAGAATTGGATAGTACCATAAGTGCACAGAAGATAACACTTTTCA TACTAATGAGGCAATGTTCTATTGGCTGTTTACCAACTAAATAGAAACTAATAAAATGTTCATT GAAACCAAAGTTTAGGTTAGGTTTACAAGAACATCTCACCACCATGCAAACTGCAGAGTATAGC ACAAAACATAAGTAATAAGTAATAACTAACCCAAAAGTCTGGAAATCTGTTTTTATAAGTAACA AGTAATCCAAAAGTCAGAAGGTCTGCTTTTATTTTCTAAAGCTTATGTTTGGTGCTAAGTACAA AGTAAAACATAAGTAACAAGTAACCCAAAAGTCTGTTTTTATCTTCTAAACTTTATTTTTTGTG CAAAGTACAGAAAAAACCTAAGTAACAAGTAACACAAAGTCCGTTTTTATTTTCTATTATTACA GATGAAAAGACGAGCAAGATACAATAGCCAACCACACAAAGGCACGTCCATAGTTCAAAGACTA ATTTCTTTGAGTGTGCCTAGATGTTTGGAGGAACAGGGGGTGAGGTAAACCTAAGTAACAAGTA ACACAAAGTCCGTTTTTATTTTCTATTATTACAGATGAAAAGACAAGCAAGATACAATAGCCAA CCACACAAAGGCACGTCCATAGTTCAAAGACTAATTTCTTTGAGTGTGCCTGGGTGTTTGGAGG AACAGGGGGTGAGGTGAGGGCTTAGTGATATATGGATAAGACTAAGAACTCGAGGGAAAAAAAA CTTAAAGAATGTATTAATATAATTCTGAGAAGAGCAACATAGTTCAAAGACTAATTTCTTTGTG TGTGCCTGGGTATTTGGAGGAACAGGGGGTGAGGTGAGGGCTTAGTGATATATGGATAAGACTA AGAACTCGAGGGAAAAAAAAACTTAAAGAATGTATTAATATAACTCTGAGAAGAGCAACATAGT GGTTATAAAATATACAAATCGGTCAGAAAGTGAGAAAGAGTTCTTACTTGGTTGGCCATAACTA GATAAAGGAATGGGTTGGTTCACGTCATTGCTGACTTCAATTCTAACAAGAGCTTTATCTTGTG CAAGATTGCTAAGATTTTGTTCTTGACACTTAAGCTTTAGCTGCTTTCTCAACGATAACTTCTC TAGCTTCCTTTCATCTCGTACAATAAGTCCTGGGAGTCACATTAATCAGAACTGATATTCAGCT GAAGGCTGGCAAAAGATTTACGGAGTTCCCCGAACCAAATCAAATATAAAAAGCAGCTTAGCAT GAAACGTTTTTAAATCAAGGTAAATGGTATATTTAGATTAAACCTGTGTGCAAGTAGTACATGT CATCCAATGCCTCAAGGGTCTTATTGCACCCACCAATAAACACAAGAACACCACTCTTCAGGGG ATCCAAACAATCCCCAGCAACAGAAAATCGAGCAGAAGGGCCATCACCCATAGTTATCACCTTG GTCCAAATGCCAGTATCTGCACCATTAGAAACATAAAATATGAACTAACCACACTTGCACATTA TTTCATCAGAAAGCAACCCTTTTGGACCACAAAGGAAAGAAATATAAACAAATAAATAACTAAA ATATTGCAATTTCCCACAACCTTCAACCTCAGATTTCTAAAACAGACTCACTAGATGATTTCAA GAAATAGAAAATTTGATTGAAGATAACACAATCAACAATTAAGTAAGACGTACCAACATCAAGC ATGTAGAGATCATCATAAAGATTCTGAGCGTCTGTAAATCCCCCAAAAACAAACAAGTTCTTGC CAAAAGCAACAGTAGAGTGGCCAGCACGAGGTGTCAACATCTGGCCTGAGGTAATCAACTCTTT CCATGCAAGAGTATCTAGCAAAAATAAGAAAAATTCCAAGAAAAAAATTAAGCAGACATAAAAA TCCAAGATTCATGTATTTTCAAGCAATGAAAACATGTAAAGTGTACAGTAAGTTGAATATAACA AGTTAACAACCAAAGACGTGTATGAAAGCATAGAAGAACAGGTAAATGCATGGACTCATGGGAA AGAAGAAAAATCAAACCTGCATCCAGGATATGGACATCAGACAAATAGTAATCATGCCCATCTT CACCACCGATCACAATAATTTTATTCTTCCAAGATGAGCAAGTATGGCTATCACGGGCAGATGG TGGGTTCCCCAATGTTGCAGCACGTTTCCAGACAAAGGTCTCTACAAGCAAAAAGATGAGGGGA AAATAAGAATTAGTATAAAACCCCAGAAAGAAAGAATAATAATAAAGAAACTTGTCCCTTCAGC CTAAGCTTTCCAAGACATTTTCAAAGCAAAAAAGATACCAAACAAAACTCAATTCCAATTTTTG AAGTGCAACAAGGAGTCTGGCAAATGCGTGAATTTGTAATTTTACCCCTCTATGGTGACATAAA TAGAGATCACATTAATCAAACTGAAATCAGCCAATGCAATAAGAAGTTAAGAATAAAGCATTGT CAAGATATTTACCTGTATTTAAAATATAGAGGTCATTGTAATAAATTTCTTCATTGTTATCAGA AGACTTTCCGCAGCCACCAAATATGAAGAGTCGTTTACCAACAAGAGCTGCGCTATGACCCTCA CGTGCCTCTGGCCCTTCACCTCTTACACTTGGACAAATCCATGTGCATGTTGCTGCAAGAAAAG CATGTAATGAGTTAATGTATTTCCACTATTGATAAGAAGCCCTCTGATGGTTTTCAAGGATGCC TTGGGAAAAATAACAGCAAACCACTTAATTTTATTTCCATGAAATGACTGAAAGGCAAAGGATT ATGATAACTTAATAATTAAAGTAACAAAAAAGAAATGGAAATTTAACTTCCTGGAATCGCTTCA ATAGCCATCTAGTAATTGCCCTTAAGTGCCTCCCCATTTCTCTCTCACTCCGAATATATATAGA GCTTCATTTTTAAATATATAATAAAATAACCATTAATTCATAAAACTGGTTCTTTATTAACCCT GTAGGATAGAAATAAAGAGCTTCAGAGTACATGACTGAGAATACAGTTCCCTCAGAGTTATGAG TGTCCAAAAATTACATGAAGACCATCTCAACAAGTTTTGTGATTATCTCCAAAGAACATTACTT CCTATAACAAAATTACATGAAGACAATCTCAACGAGTTTTGTGACTATCTCCAAAGAACATTAA TTCCTACAACAAACTTAAAAGGGAAAAATATGTTGATTCTGTCACTGGTTCTAAAGTAGTATCA CCCAACCATTCCACTTAAGCAAAATGATATCTTTCATGGAATTTGAAAGGAAAATCAAGGCAAA TGCGGATAATGGGTAATAAGAGGTGAACAAAAGGAAATCGAATGTGAGGAATAACTCACCAGTG TCTAATATATGCAGATCCTTGAGAGGATTCATCCCATCAGTACCACCAAAGACAAATAGGTTGT CACCAACAGTAGTACAACTATGACTATCCCTTGGAATTGGCGGTGTGCCTTTTGTTGCTAGTAG GCTCCATGTCCGACTAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							ghi_circ_000258* 						
					
						PMCS
						0.51284272

Conservation Information
Conserved circRNAs	ghi_circ_000258*
PMCS	0.51284272

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							31242410-31242501(-)
						
						Potential amino acid sequence
						
							MNPLKDLHILDTATCTWICPSVRGEGPEAREGHSAALVGKRLFIFGGCGKSSDNNEEIYYNDLY
ILNTETFVWKRAATLGNPPSARDSHTCSSWKNKIIVIGGEDGHDYYLSDVHILDADTLAWKELI
TSGQMLTPRAGHSTVAFGKNLFVFGGFTDAQNLYDDLYMLDVDTGIWTKVITMGDGPSARFSVA
GDCLDPLKSGVLVFIGGCNKTLEALDDMYYLHTGLIVRDERKLEKLSLRKQLKLKCQEQNLSNL
AQDKALVRIEVSNDVNQPIPLSSYGQPRRENFPLNQVLHQGKKTFRAKVTESFPHGYTIETIID
GKPLRGILFANTPSSVHVHNHNPSRKRTSVEVGGTVLNGDCDSKSRSVRQDSGDHKQADVHEKD
YLLHDTEVPAPSLRDPAQSDLSTHKLVGHGAY*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	31242410-31242501(-)
Potential amino acid sequence	MNPLKDLHILDTATCTWICPSVRGEGPEAREGHSAALVGKRLFIFGGCGKSSDNNEEIYYNDLY ILNTETFVWKRAATLGNPPSARDSHTCSSWKNKIIVIGGEDGHDYYLSDVHILDADTLAWKELI TSGQMLTPRAGHSTVAFGKNLFVFGGFTDAQNLYDDLYMLDVDTGIWTKVITMGDGPSARFSVA GDCLDPLKSGVLVFIGGCNKTLEALDDMYYLHTGLIVRDERKLEKLSLRKQLKLKCQEQNLSNL AQDKALVRIEVSNDVNQPIPLSSYGQPRRENFPLNQVLHQGKKTFRAKVTESFPHGYTIETIID GKPLRGILFANTPSSVHVHNHNPSRKRTSVEVGGTVLNGDCDSKSRSVRQDSGDHKQADVHEKD YLLHDTEVPAPSLRDPAQSDLSTHKLVGHGAY*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zhao et al., 2017b

circRNA

Detail information of orai.003G102300_circ_g.1

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