Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | Zm00001d014792_circ_g.2 |
ID in PlantcircBase | zma_circ_004869 |
Alias | heat_test_circ_001240 |
Organism | Zea mays |
Position | chr5: 63349275-63349332 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d014792 |
Parent gene annotation |
shepherd-like1 |
Parent gene strand | - |
Alternative splicing | Zm00001d014792_circ_g.1 |
Support reads | NA |
Tissues | seedling |
Exon boundary | No-No |
Splicing signals | CT-GA |
Number of exons covered | Zm00001d014792_T007:1 Zm00001d014792_T006:1 Zm00001d014792_T001:1 Zm00001d014792_T004:1 Zm00001d014792_T005:1 Zm00001d014792_T003:1 Zm00001d014792_T002:1 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.454022989 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Tang et al., 2018 |