Detail information of BGIOSGA031677_circ_g.1


General Information
CircRNA Name BGIOSGA031677_circ_g.1
ID in PlantcircBase osi_circ_002864
Alias 10:17005588|17006547
Organism Oryza sativa ssp. indica
Position chr10: 17005588-17006547  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   e-circRNA
Identification method find_circ
Parent gene BGIOSGA031677
Parent gene annotation NA
Parent gene strand -
Alternative splicing BGIOSGA031677_circ_g.2
Support reads NA
Tissues leaf
Exon boundary   Yes-Yes
Splicing signals   CT-AC
Number of exons covered BGIOSGA031677-TA:4
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   AAACCAAACACTAATACACGTGCGGTGAGCCTTTGAAAGATCACCTCGACATCTGCACCCAAGG
TCTACCAAAGGTTCTTCTGTCTTCTGTTGACATACCcaattattatgttcacaggaagtgcgga
gacgccaagagaaacagatatcagaacatccaacaagagtccgccaataagaattgcaaatgca
acccacag
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence CAATTATTATGTTCACAGGAAGTGCGGAGACGCCAAGAGAAACAGATATCAGAACATCCAACAA
GAGTCCGCCAATAAGAATTGCAAATGCAACCCACAGAGGGCTAAACCATCCCTACATACACAAA
GAGAAAGACATCATATATGAAGCAGAACAGAGTGAATAATTTCAGCACAATTGAAGACAGTCAC
ATGGTAGTTTAGTTAGTAACTTCTTTCTGCATCAGTGCAGTCAGATAGTTAATTCATATGCATC
TGTTTCTTTTTATTATCTGTCTCCAGTTACAAAAATACCCTTTCATGTCCTCCTCGGCCCCTTC
CATAAGCTGAATCAACCCTCCAAACCCAATAACTTGTCTGCTCAATGAGAAAAAAGCAAATTTT
TCACTACTAGCAAGAGAAATTCGGTTTATACTTTTTGCAACACAATATCCACTGAATTTCAGGA
GGCATTTAATTGTCTAGCAGTGGAACATAAATATTTGAAAAGCTCAATCAATTGAAAATGATAC
ATATAGGGAAGTGTTCAAAACTACAAACACATAAAAGCAAAAAGATGTGATTTAGCTGGTCTCA
ACATAGATAGAGCTCAGTCGTTTTTTTTTACTTGAGGATATAACTAATAATGGCTAAACATAGG
ATGGGAAGTAATGTTTTCCAAAATAAACCTTGAAAACAATATTAGACAGGGTGAGAAATGGTAT
ACATACACTAGCTTGCGTCTCTGGAGGGGGAATATTGACAGCAACCTGCCTGTGTAGCAAACAG
CTTCAGTAAATAAAAATAGTTCAGAATAGCCAATAACCATCTATGAAGAAGACTTACTGGCAGA
TTTCACACTTGTTTGAACCTCTAGTACGAAACCAAACACTAATACACGTGCGGTGAGCCTTTGA
AAGATCACCTCGACATCTGCACCCAAGGTCTACCAAAGGTTCTTCTGTCTTCTGTTGACATACC
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Huang et al., 2021