Plant Circular RNA Database

Detail information of Csa1G031190_circ_g.2

			
						 General Information
					
						CircRNA Name
						Csa1G031190_circ_g.2
					
						ID in PlantcircBase
						csa_circ_000120
					
						Alias
						Chr1:3244941_3249940
					
						Organism
						
							Cucumis sativus						
					
						Position
						
							chrChr1: 3244941-3249940  JBrowse»						
					
						Reference genome
						
							Cucumis sativus v1.5						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Csa1G031190						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						+
					
						Alternative splicing
						
							Chr1_circ_ig.24 Csa1G031190_circ_g.1 						
					
						Support reads
						NA
					
						Tissues
						leaf,root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Csa1G031190.1:4

General Information
CircRNA Name	Csa1G031190_circ_g.2
ID in PlantcircBase	csa_circ_000120
Alias	Chr1:3244941_3249940
Organism	Cucumis sativus
Position	chrChr1: 3244941-3249940 JBrowse»
Reference genome	Cucumis sativus v1.5
Type	e-circRNA
Identification method	CIRI2
Parent gene	Csa1G031190
Parent gene annotation	NA
Parent gene strand	+
Alternative splicing	Chr1_circ_ig.24 Csa1G031190_circ_g.1
Support reads	NA
Tissues	leaf,root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Csa1G031190.1:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ATGTCTGCTTCCGAGCATCAACAAGAAAGACGGAAAAAACGTTCTGCTGTTGGCACACCAGACT
ATTTGGCACCCGAGATACTATTGGGAACTGGACACGgttttgaagaaagcggatatgattcgga
agaacgcggttgaaagtattttggcagaacgtaatattttaatttctgtgcgcaatccttttgt
ggtgagct

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 532
Transcript exons: 3244941-3245033,3245115-3245255,3245355-3245447,3249736-
3249940
GTTTTGAAGAAAGCGGATATGATTCGGAAGAACGCGGTTGAAAGTATTTTGGCAGAACGTAATA
TTTTAATTTCTGTGCGCAATCCTTTTGTGGTTCGCTTCTTCTACTCTTTTACTTGTCGTGACAA
TTTGTATCTTGTGATGGAGTATTTGAATGGAGGAGACCTTTACTCTTTGTTGAGAAATTTGGGC
TGCTTAGACGAAGAGGTTGCTCGTGTATATATCGCAGAAGTTGTTCTTGCATTGGAGTATTTGC
ATTCACTTGGGGTTGTTCATCGGGACTTAAAGCCTGATAATTTATTAATAGCACATGATGGCCA
TATTAAGCTGACAGATTTTGGGCTTTCCAAGGTTGGTCTAATCAACAGTACTGATGACTTGTCT
GGACCAGCTGTTAGTGGGACCACTCTTCTTGGCTATGATGAGCCTACCATGTCTGCTTCCGAGC
ATCAACAAGAAAGACGGAAAAAACGTTCTGCTGTTGGCACACCAGACTATTTGGCACCCGAGAT
ACTATTGGGAACTGGACACG
						
					

						Genomic sequence
						
							GTTTTGAAGAAAGCGGATATGATTCGGAAGAACGCGGTTGAAAGTATTTTGGCAGAACGTAATA
TTTTAATTTCTGTGCGCAATCCTTTTGTGGTGAGCTTGTCTATTTGGTCATGTAAGTTATGCCT
TATTTTCCTTTTGGTTTTGTTTTAACTGTAAAGTTAATTGTATCAGGTTCGCTTCTTCTACTCT
TTTACTTGTCGTGACAATTTGTATCTTGTGATGGAGTATTTGAATGGAGGAGACCTTTACTCTT
TGTTGAGAAATTTGGGCTGCTTAGACGAAGAGGTTGCTCGTGTATATATCGCAGAAGTTGTATG
TATATGTTTTCTTTTCATCTTTCATTAGTCGGCGAAGTTAAAACAGTTGTTAGTATTGCAAGCT
CAATATTTGTTTGTTTCTTTAACTTTTCAGGTTCTTGCATTGGAGTATTTGCATTCACTTGGGG
TTGTTCATCGGGACTTAAAGCCTGATAATTTATTAATAGCACATGATGGCCATATTAAGGTAAA
TTAAGACCGATGAATATGTTTGATCTAATAAGTTATTTAGATATTTATAATAGAGAATTTTTCA
CAGATAAAAATATCCCCAAAATTAAGAAAAACATTTCCAAAATTAGGAACTTCTAAAATTTCCA
AAAATTTCAAAGATAGAGAAATCAATAGGATCGGAAAATATTTTTTTAATTTTGAGCATCCCGT
ATTTTGATTAAAAGTATGTTTTTTTTAAACGGAGACAAACTTCTTTATTAATAAAGAAAAATGA
GACTAATGCTCAAAGTACAAGATAATTATACAAAGAGCAAAAAGAAAAGACAAAAACAACCAAA
CAAACTGCCCAAAGAGGATCTCGGCCAATACAAGGGAAAACAACCAAAACAAACGCAAAGAACA
AGCTAAAAAGGCAAAAACCAACTGAAAGAATGAAGTTAAAATAAAACAAAAATGAAGAGATCTA
AATACAAAGCATAACAAACTAATTTTCTCAAAAGGAAACCATTCGGATCTAGAGACTAGCAAAA
AGATGCAACTGGTGAACGCAAAGCTATCTTGCCAAAGTAGTCCAAACCCAGAAGAGGAACAAAA
AAATCTTTCAAAATATCGGCATCAGCAAAAGGTTGTACTTCCTATACAACACCTCAAGACACCG
TGTTGAATCTTCAATTGATGTTCCAATCGAAAACTCATCCCCGATGCATGTAGAAGTACTAAAG
ATATACACCAGAATATTTCTCCCATAAGCCACTTTAATAGATTCCAGCACCTTTTTCAACCATA
ACTTGATTCACGATGAACAAGATAATCTCATAGAATAAGCTTGAGAAATATTCTGGCAATGAAG
ACTTCCAAAGATGAGTTGCAGGAAACATTAACAAATTCGCCTTATGAACTAAATACTTCTTGGC
AGTTACCATGAAAAGCTAGCGATACTTTACCATAGGAACCACGAGCAAACCTTTTCTTTAGTGG
CTGCACTTTTAAAATAGTCCAGAATAATTCCACAGATGATTGACATTAACTCTTTAGGCAAATC
TGGTGGAAAATTATTTGGGAGAAAACCATCCTCATCAAACAAAACATTTCAGTCCCTCCTTTCA
ATTTCTGGATCCAATTTAGGGTCAACTTCACTAAGATCAACTGATTCTTCACTGCTAACACTGA
TAGGAGAGAAAATTTTGGGCTGGTCTTTAGGACTTAAGTCAGCCTTGCATGAAGAGCCTTGCTG
ACAAGATGTCTTTGCAATAGAGGTGGAGGATTTTGAAGTGTTGAGACGAAGGAGAAGTGCTATT
TACTGACTTGGAAAAATGCTCAGGGGCTTGGATTTTAGAGCTTAAACTTCCAAGAGATCTGGGT
TATTGACAGAAACTGAATGCTTGATGGTGTTATTCCTAGAAGAGTCCAAAGGGGGAATTTTAAG
GTCACCAAACCCCATTTAATTCAGATTCTAGCAGGGTAGTCCACACGTTGTTGAAGGAGGTTTG
CTTGCGGATATAGTGTTTAAGAATTTTTGGAATAAGAGAGGATTTACTACCTTTGGAATATTAA
AAACAGGATCAATAGAAGTGCACCCCACTGTCTTTTTGCAACAGCTGTCTGACTTGGGTTTAGT
AAAATTGAAAAAAGGGGCCTGTTCAGTTGCCCGGTCATTCAACGCTTCTTCAACTTGATTGCCG
GCCACTGTTTTCATCTCTGACACCGGTGAAGTGGATGGAAAATTTTTCAGAATTTCAAATGGAT
TTCTGCTTCTAGGGAGAGATGCAAACACTGATCTCAGGATTTTCTGGACTAACGGAAAGAAGGA
GGGATCAAAATCTTCATCAATCATAACTTCTCTAATCCTGAAACAATCAAGAGAGTTATTAAAA
TCATCTCGTAAGTTAGGGGCTTTAAGGGAAATATGAGGATTTAAGAATTCAAAATCTCCAAAAT
GAAGATATATATGTCCCCTCTTTAGATCAGTGATTTCAATCGTGGAGGGCACAAAACCACATAG
ATTCTTCTTAACTTGAATTCGGGCTTCACTAACATTAATTAAATTTAGNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTTGGAAAAGAGCTTCCAACCTTTTACGGATCAATTTCCAGTCATATGAG
GCAAATAACTTTGTTTTTTTTTTGAAAAGGAGACAAACTTCTTTATTATTAATAAACTCAATGT
ACAATAGAGCTTTACAAAGAGAATAATAGGGAAGCCAAGAAATGAGGGAGAGAGAGAGAAAGGG
AGAGATGCAAACACCGATTTTGGGATTTTCTGGACTAAAGGAAAGAAGGAGGGATCAAGATCTT
CATCAATCATAACTTCTCTAATCCTGAAGCAAATAACTTTGTTATAATCCAAAATTTTGAAATT
GACTTTTCCAACTTCATGGTTCTCAATCAGCCAATGCTTTTGTTTTGAAGGGGGAAGATCGACT
TATTTTTGAAACTTCTTGTTTGGACTAGGAGGCTGGTCAGTACCCTTAAAATTAGGTCTTAGAA
CAGGGGAATTTGAAAGAACTGATTTTGCCATTTCAAACATAACTTAGTTTTCTATTCAAAATCG
GAGGAGGAACATTGAGGGAATTTTCAGCAAACCATCTAGCATAATCCAGTTTTTCGACAAACTT
ATCCAACATCGAGCAAAACAATTTCCAACCTTGCTTCTCCCTACGTAAGCACACTCTGATATTT
AAGAGACCCCCTGAATATGGCCAGAGATCACAACTCAGTATCCAACCCCATGTTACTTGAAACT
TTGAAATTCTCAATCTGCCTCTGTCAATATCTCCATGTTTCCGAAAATGGCTCTCTACCGGAAA
ACTGATAAGATCAGTTAACATTGACCTGATCCATCTAAGTTGGCGAACGGATAGATAGATAATT
CTGTCGGCTTCTACATCTTCAATAAAGCAACAATCTCCTTCTTGCCAAATGCAGTGGTGTGACT
GGTCAATTTTACAACAAACCACCTCCATAGTGAACTTAATGGAGAGGGCTGCTGAAAAACATGG
CTGCCGGAGAGGGGAGGAGAGGGGAGATCGAAGGGAGTGGGGTGGAGAGAGGAGAGAGGAGAGA
GGAGAGAGGAGAGAGGAGAGAGGAGAGAGGGGAGAGAGAAAACTTACCTTCTAATCTCTTGATT
AAAAATATGTTTACATGCACAACGTATTTTTATTTTTCTAAAAATAAAAAATAAAAATAACGTG
TCCCTGCTGTGTCGTGACTACTTTTTCAGAAATTGGCGTGTCGCCATGTCAGTGGTGTGTCATA
TTCGTATCACGTGTCAGTGTCAGTGCTTGCTAGCTAGTTTCTATTACTGATACACATTAATAGA
CTTCTATTAGCCTCTATTAACGATAGACCTGATAGACTTCTATCAGCATCTATTGATGGCAGAC
TTGTACTAGTTTCTATTTATGACTTTTATTAGTGTCTATCTGGTTTGTCAATAATGTAGAAATT
TTTGTTATAATTTGTAAATAGTTTGGTCCATTTTTCTAGATTTAAAAGGTTTCCTTTATAATAA
TTGTGAGGCATTAATGTAATAAATAGCATAAAACCTAATAATATGTTTGCTCTTGTCAGCCTCA
AAATTGTGTTCTTCATTCTGTATCTTTGTGATTATTCAAGTTATTTTTTTTTTTTGAAAGGGAA
ATACACTTTTCATTGATTATTGAAGTTATTGGTAATAATTGGAAGACCATTATGTGAGATTAAG
GCTTTAGTTTTTCTTATTGCTTTATGTTTCTTTTTAGTGTTCGGTGTTACTTTTGGTAGTATTG
TTTTTTTTTTTGTTGTTTTCTTTTTTGTATCTTGTACTTGGATTTTCTTTTGGTCTTTGGTTTT
TCCTTGGTCCCCCTTCCCCTTTTTTTGGCTTCTTTTTTTTTTCTCATTGTATAATTCTTTTGTA
CTTTGAGTTTTATATTAATAGAAGCTTGTCTCCGTTTCAAAAAAAAAAATCTTCTCAACTACTA
GTAAAAGATTCCTTTATTCTTAAAAAAATGCATTTAATTACTTTCACTGAAATTTCAGCTTCTC
ATAATAATGGAAATCAATATAATTCTCTGTTACTTACAGAATTATTTTGCTTCAAGCAGCTGAC
AGATTTTGGGCTTTCCAAGGTTGGTCTAATCAACAGTACTGATGACTTGTCTGGACCAGCTGTT
AGTGGGACCACTCTTCTTGGCTATGATGAGCCTACCATGTCTGCTTCCGAGCATCAACAAGAAA
GACGGAAAAAACGTTCTGCTGTTGGCACACCAGACTATTTGGCACCCGAGATACTATTGGGAAC
TGGACACG
						
					

			
		

Sequences
Splice junction sequence	ATGTCTGCTTCCGAGCATCAACAAGAAAGACGGAAAAAACGTTCTGCTGTTGGCACACCAGACT ATTTGGCACCCGAGATACTATTGGGAACTGGACACGgttttgaagaaagcggatatgattcgga agaacgcggttgaaagtattttggcagaacgtaatattttaatttctgtgcgcaatccttttgt ggtgagct
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 532 Transcript exons: 3244941-3245033,3245115-3245255,3245355-3245447,3249736- 3249940 GTTTTGAAGAAAGCGGATATGATTCGGAAGAACGCGGTTGAAAGTATTTTGGCAGAACGTAATA TTTTAATTTCTGTGCGCAATCCTTTTGTGGTTCGCTTCTTCTACTCTTTTACTTGTCGTGACAA TTTGTATCTTGTGATGGAGTATTTGAATGGAGGAGACCTTTACTCTTTGTTGAGAAATTTGGGC TGCTTAGACGAAGAGGTTGCTCGTGTATATATCGCAGAAGTTGTTCTTGCATTGGAGTATTTGC ATTCACTTGGGGTTGTTCATCGGGACTTAAAGCCTGATAATTTATTAATAGCACATGATGGCCA TATTAAGCTGACAGATTTTGGGCTTTCCAAGGTTGGTCTAATCAACAGTACTGATGACTTGTCT GGACCAGCTGTTAGTGGGACCACTCTTCTTGGCTATGATGAGCCTACCATGTCTGCTTCCGAGC ATCAACAAGAAAGACGGAAAAAACGTTCTGCTGTTGGCACACCAGACTATTTGGCACCCGAGAT ACTATTGGGAACTGGACACG
Genomic sequence	GTTTTGAAGAAAGCGGATATGATTCGGAAGAACGCGGTTGAAAGTATTTTGGCAGAACGTAATA TTTTAATTTCTGTGCGCAATCCTTTTGTGGTGAGCTTGTCTATTTGGTCATGTAAGTTATGCCT TATTTTCCTTTTGGTTTTGTTTTAACTGTAAAGTTAATTGTATCAGGTTCGCTTCTTCTACTCT TTTACTTGTCGTGACAATTTGTATCTTGTGATGGAGTATTTGAATGGAGGAGACCTTTACTCTT TGTTGAGAAATTTGGGCTGCTTAGACGAAGAGGTTGCTCGTGTATATATCGCAGAAGTTGTATG TATATGTTTTCTTTTCATCTTTCATTAGTCGGCGAAGTTAAAACAGTTGTTAGTATTGCAAGCT CAATATTTGTTTGTTTCTTTAACTTTTCAGGTTCTTGCATTGGAGTATTTGCATTCACTTGGGG TTGTTCATCGGGACTTAAAGCCTGATAATTTATTAATAGCACATGATGGCCATATTAAGGTAAA TTAAGACCGATGAATATGTTTGATCTAATAAGTTATTTAGATATTTATAATAGAGAATTTTTCA CAGATAAAAATATCCCCAAAATTAAGAAAAACATTTCCAAAATTAGGAACTTCTAAAATTTCCA AAAATTTCAAAGATAGAGAAATCAATAGGATCGGAAAATATTTTTTTAATTTTGAGCATCCCGT ATTTTGATTAAAAGTATGTTTTTTTTAAACGGAGACAAACTTCTTTATTAATAAAGAAAAATGA GACTAATGCTCAAAGTACAAGATAATTATACAAAGAGCAAAAAGAAAAGACAAAAACAACCAAA CAAACTGCCCAAAGAGGATCTCGGCCAATACAAGGGAAAACAACCAAAACAAACGCAAAGAACA AGCTAAAAAGGCAAAAACCAACTGAAAGAATGAAGTTAAAATAAAACAAAAATGAAGAGATCTA AATACAAAGCATAACAAACTAATTTTCTCAAAAGGAAACCATTCGGATCTAGAGACTAGCAAAA AGATGCAACTGGTGAACGCAAAGCTATCTTGCCAAAGTAGTCCAAACCCAGAAGAGGAACAAAA AAATCTTTCAAAATATCGGCATCAGCAAAAGGTTGTACTTCCTATACAACACCTCAAGACACCG TGTTGAATCTTCAATTGATGTTCCAATCGAAAACTCATCCCCGATGCATGTAGAAGTACTAAAG ATATACACCAGAATATTTCTCCCATAAGCCACTTTAATAGATTCCAGCACCTTTTTCAACCATA ACTTGATTCACGATGAACAAGATAATCTCATAGAATAAGCTTGAGAAATATTCTGGCAATGAAG ACTTCCAAAGATGAGTTGCAGGAAACATTAACAAATTCGCCTTATGAACTAAATACTTCTTGGC AGTTACCATGAAAAGCTAGCGATACTTTACCATAGGAACCACGAGCAAACCTTTTCTTTAGTGG CTGCACTTTTAAAATAGTCCAGAATAATTCCACAGATGATTGACATTAACTCTTTAGGCAAATC TGGTGGAAAATTATTTGGGAGAAAACCATCCTCATCAAACAAAACATTTCAGTCCCTCCTTTCA ATTTCTGGATCCAATTTAGGGTCAACTTCACTAAGATCAACTGATTCTTCACTGCTAACACTGA TAGGAGAGAAAATTTTGGGCTGGTCTTTAGGACTTAAGTCAGCCTTGCATGAAGAGCCTTGCTG ACAAGATGTCTTTGCAATAGAGGTGGAGGATTTTGAAGTGTTGAGACGAAGGAGAAGTGCTATT TACTGACTTGGAAAAATGCTCAGGGGCTTGGATTTTAGAGCTTAAACTTCCAAGAGATCTGGGT TATTGACAGAAACTGAATGCTTGATGGTGTTATTCCTAGAAGAGTCCAAAGGGGGAATTTTAAG GTCACCAAACCCCATTTAATTCAGATTCTAGCAGGGTAGTCCACACGTTGTTGAAGGAGGTTTG CTTGCGGATATAGTGTTTAAGAATTTTTGGAATAAGAGAGGATTTACTACCTTTGGAATATTAA AAACAGGATCAATAGAAGTGCACCCCACTGTCTTTTTGCAACAGCTGTCTGACTTGGGTTTAGT AAAATTGAAAAAAGGGGCCTGTTCAGTTGCCCGGTCATTCAACGCTTCTTCAACTTGATTGCCG GCCACTGTTTTCATCTCTGACACCGGTGAAGTGGATGGAAAATTTTTCAGAATTTCAAATGGAT TTCTGCTTCTAGGGAGAGATGCAAACACTGATCTCAGGATTTTCTGGACTAACGGAAAGAAGGA GGGATCAAAATCTTCATCAATCATAACTTCTCTAATCCTGAAACAATCAAGAGAGTTATTAAAA TCATCTCGTAAGTTAGGGGCTTTAAGGGAAATATGAGGATTTAAGAATTCAAAATCTCCAAAAT GAAGATATATATGTCCCCTCTTTAGATCAGTGATTTCAATCGTGGAGGGCACAAAACCACATAG ATTCTTCTTAACTTGAATTCGGGCTTCACTAACATTAATTAAATTTAGNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNTTGGAAAAGAGCTTCCAACCTTTTACGGATCAATTTCCAGTCATATGAG GCAAATAACTTTGTTTTTTTTTTGAAAAGGAGACAAACTTCTTTATTATTAATAAACTCAATGT ACAATAGAGCTTTACAAAGAGAATAATAGGGAAGCCAAGAAATGAGGGAGAGAGAGAGAAAGGG AGAGATGCAAACACCGATTTTGGGATTTTCTGGACTAAAGGAAAGAAGGAGGGATCAAGATCTT CATCAATCATAACTTCTCTAATCCTGAAGCAAATAACTTTGTTATAATCCAAAATTTTGAAATT GACTTTTCCAACTTCATGGTTCTCAATCAGCCAATGCTTTTGTTTTGAAGGGGGAAGATCGACT TATTTTTGAAACTTCTTGTTTGGACTAGGAGGCTGGTCAGTACCCTTAAAATTAGGTCTTAGAA CAGGGGAATTTGAAAGAACTGATTTTGCCATTTCAAACATAACTTAGTTTTCTATTCAAAATCG GAGGAGGAACATTGAGGGAATTTTCAGCAAACCATCTAGCATAATCCAGTTTTTCGACAAACTT ATCCAACATCGAGCAAAACAATTTCCAACCTTGCTTCTCCCTACGTAAGCACACTCTGATATTT AAGAGACCCCCTGAATATGGCCAGAGATCACAACTCAGTATCCAACCCCATGTTACTTGAAACT TTGAAATTCTCAATCTGCCTCTGTCAATATCTCCATGTTTCCGAAAATGGCTCTCTACCGGAAA ACTGATAAGATCAGTTAACATTGACCTGATCCATCTAAGTTGGCGAACGGATAGATAGATAATT CTGTCGGCTTCTACATCTTCAATAAAGCAACAATCTCCTTCTTGCCAAATGCAGTGGTGTGACT GGTCAATTTTACAACAAACCACCTCCATAGTGAACTTAATGGAGAGGGCTGCTGAAAAACATGG CTGCCGGAGAGGGGAGGAGAGGGGAGATCGAAGGGAGTGGGGTGGAGAGAGGAGAGAGGAGAGA GGAGAGAGGAGAGAGGAGAGAGGAGAGAGGGGAGAGAGAAAACTTACCTTCTAATCTCTTGATT AAAAATATGTTTACATGCACAACGTATTTTTATTTTTCTAAAAATAAAAAATAAAAATAACGTG TCCCTGCTGTGTCGTGACTACTTTTTCAGAAATTGGCGTGTCGCCATGTCAGTGGTGTGTCATA TTCGTATCACGTGTCAGTGTCAGTGCTTGCTAGCTAGTTTCTATTACTGATACACATTAATAGA CTTCTATTAGCCTCTATTAACGATAGACCTGATAGACTTCTATCAGCATCTATTGATGGCAGAC TTGTACTAGTTTCTATTTATGACTTTTATTAGTGTCTATCTGGTTTGTCAATAATGTAGAAATT TTTGTTATAATTTGTAAATAGTTTGGTCCATTTTTCTAGATTTAAAAGGTTTCCTTTATAATAA TTGTGAGGCATTAATGTAATAAATAGCATAAAACCTAATAATATGTTTGCTCTTGTCAGCCTCA AAATTGTGTTCTTCATTCTGTATCTTTGTGATTATTCAAGTTATTTTTTTTTTTTGAAAGGGAA ATACACTTTTCATTGATTATTGAAGTTATTGGTAATAATTGGAAGACCATTATGTGAGATTAAG GCTTTAGTTTTTCTTATTGCTTTATGTTTCTTTTTAGTGTTCGGTGTTACTTTTGGTAGTATTG TTTTTTTTTTTGTTGTTTTCTTTTTTGTATCTTGTACTTGGATTTTCTTTTGGTCTTTGGTTTT TCCTTGGTCCCCCTTCCCCTTTTTTTGGCTTCTTTTTTTTTTCTCATTGTATAATTCTTTTGTA CTTTGAGTTTTATATTAATAGAAGCTTGTCTCCGTTTCAAAAAAAAAAATCTTCTCAACTACTA GTAAAAGATTCCTTTATTCTTAAAAAAATGCATTTAATTACTTTCACTGAAATTTCAGCTTCTC ATAATAATGGAAATCAATATAATTCTCTGTTACTTACAGAATTATTTTGCTTCAAGCAGCTGAC AGATTTTGGGCTTTCCAAGGTTGGTCTAATCAACAGTACTGATGACTTGTCTGGACCAGCTGTT AGTGGGACCACTCTTCTTGGCTATGATGAGCCTACCATGTCTGCTTCCGAGCATCAACAAGAAA GACGGAAAAAACGTTCTGCTGTTGGCACACCAGACTATTTGGCACCCGAGATACTATTGGGAAC TGGACACG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.43584543

Conservation Information
Conserved circRNAs	NA
PMCS	0.43584543

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							3244960-3244978(+)
3249783-3244978(+)
						
						Potential amino acid sequence
						
							MIRKNAVESILAERNILISVRNPFVVRFFYSFTCRDNLYLVMEYLNGGDLYSLLRNLGCLDEEV
ARVYIAEVVLALEYLHSLGVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSG
TTLLGYDEPTMSASEHQQERRKKRSAVGTPDYLAPEILLGTGHGFEESGYDSEERG*
MTCLDQLLVGPLFLAMMSLPCLLPSINKKDGKNVLLLAHQTIWHPRYYWELDTVLKKADMIRKN
AVESILAERNILISVRNPFVVRFFYSFTCRDNLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYI
AEVVLALEYLHSLGVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLG
YDEPTMSASEHQQERRKKRSAVGTPDYLAPEILLGTGHGFEESGYDSEERG*
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to salt stress in root

Functional Information
Coding potential	Y
Potential coding position	3244960-3244978(+) 3249783-3244978(+)
Potential amino acid sequence	MIRKNAVESILAERNILISVRNPFVVRFFYSFTCRDNLYLVMEYLNGGDLYSLLRNLGCLDEEV ARVYIAEVVLALEYLHSLGVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSG TTLLGYDEPTMSASEHQQERRKKRSAVGTPDYLAPEILLGTGHGFEESGYDSEERG* MTCLDQLLVGPLFLAMMSLPCLLPSINKKDGKNVLLLAHQTIWHPRYYWELDTVLKKADMIRKN AVESILAERNILISVRNPFVVRFFYSFTCRDNLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYI AEVVLALEYLHSLGVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLG YDEPTMSASEHQQERRKKRSAVGTPDYLAPEILLGTGHGFEESGYDSEERG*
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to salt stress in root

			
						 Other Information
					
						References
						Zhu et al., 2019

circRNA

Detail information of Csa1G031190_circ_g.2

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