Splice junction sequence |
TCTCAGATTCACGTTTGTCCGTGATATACTAGCCTATTTCTATGGCCATCTTCCTGGGAAACTT GTTCTGCGCATGCTCAAAGTACTTGATCTCAGCAAGatgagcctacttaaaacgccagaccttc tgctgaggataaaaaactactgccaaaaccgtgggtctcctgagcactggcttgtcacacaggt gttcaaac
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 390 Transcript exons: 8249248-8249396,8249642-8249882 ATGAGCCTACTTAAAACGCCAGACCTTCTGCTGAGGATAAAAAACTACTGCCAAAACCGTGGGT CTCCTGAGCACTGGCTTGTCACACAGGTGTTCAAACGCAATGAACTCCAGAAGGCCCTGGGTAA CCATCTTTCTTGGAAGGACAGGTATCCAACGTTCTTTGATGATATTGCAGCGCGTTTGCTTCCA GTTATCCCTCTAGTGCTTTACAGGCTCATCGAGAACAATGCGATGGAGCAAGCTGATAATCTTT TGCTTGCACACTCGCATTTTCTAGCGTATCATCCTCTCAGATTCACGTTTGTCCGTGATATACT AGCCTATTTCTATGGCCATCTTCCTGGGAAACTTGTTCTGCGCATGCTCAAAGTACTTGATCTC AGCAAG
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Genomic sequence |
ATGAGCCTACTTAAAACGCCAGACCTTCTGCTGAGGATAAAAAACTACTGCCAAAACCGTGGGT CTCCTGAGCACTGGCTTGTCACACAGGTGTTCAAACGCAATGAACTCCAGAAGGCCCTGGGTAA CCATCTTTCTTGGAAGGACAGGTAATATATCCAATTCAACATCAGTGTAACTGATTTCTAACAA CAATTTCACTTAAGTACATGGCTTTGATTGTTTGATTGGTTTTGTTGGCATCCAACCATAAATG TGTGATGGAACCTTCCATGAAAACTTGTGTATGACTAGGAAATAGTTGAATTTTGGTTTGATCT GTTTTAATTTTGGTGTTGGATTCTGCTAAAGTTGGGTAAATGTTTTACCTATTTTTTTATTGTG TTAAACGCAGGTATCCAACGTTCTTTGATGATATTGCAGCGCGTTTGCTTCCAGTTATCCCTCT AGTGCTTTACAGGCTCATCGAGAACAATGCGATGGAGCAAGCTGATAATCTTTTGCTTGCACAC TCGCATTTTCTAGCGTATCATCCTCTCAGATTCACGTTTGTCCGTGATATACTAGCCTATTTCT ATGGCCATCTTCCTGGGAAACTTGTTCTGCGCATGCTCAAAGTACTTGATCTCAGCAAG |