Plant Circular RNA Database

Detail information of Solyc10g039190.1_circ_g.1

			
						 General Information
					
						CircRNA Name
						Solyc10g039190.1_circ_g.1
					
						ID in PlantcircBase
						sly_circ_003092
					
						Alias
						NA
					
						Organism
						
							Solanum lycopersicum						
					
						Position
						
							chr10: 20781779-20785740  JBrowse»						
					
						Reference genome
						
							SL2.50.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Solyc10g039190.1						
					
						Parent gene annotation
						
							protein_coding
							
						Parent gene strand
						+
					
						Alternative splicing
						
							NA						
					
						Support reads
						4
					
						Tissues
						fruit
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Solyc10g039190.1.1:7

General Information
CircRNA Name	Solyc10g039190.1_circ_g.1
ID in PlantcircBase	sly_circ_003092
Alias	NA
Organism	Solanum lycopersicum
Position	chr10: 20781779-20785740 JBrowse»
Reference genome	SL2.50.38
Type	e-circRNA
Identification method	CIRI
Parent gene	Solyc10g039190.1
Parent gene annotation	protein_coding
Parent gene strand	+
Alternative splicing	NA
Support reads	4
Tissues	fruit
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Solyc10g039190.1.1:7

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AGTACTGCTAGTGCAACTTCATCATCACCAATTGGTTTCAACTGTCTCTGCCAGACCCCTCATT
ACCCGTCTAAGCGACAGTCTTGCTGCAAAAGTCAAAgggtctaagcatttaactgcatctccga
caagtagtttaaaaatgaatgatgatgttctagttgttgctgcgagccctgatggtaaatttat
tgctgttg

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							GGGTCTAAGCATTTAACTGCATCTCCGACAAGTAGTTTAAAAATGAATGATGATGTTCTAGTTG
TTGCTGCGAGCCCTGATGGTAAATTTATTGCTGTTGCCTTGTTGGATAGCACAGTAAAGGTAAC
AGTCTTAACTTATTTGAATTGTATATGTTTTGATTAAAGTTGGACATTCTCATTTCATGGGACT
TGGAAGTATTCATTATGAAAGTATTTGTGAAATTATCTGGTCAAATCACTTGGCTCTTTTTCTT
GGAGTTTGTAATTACTCTTCACTCCTGGTACTGATTTTTACTATATTAGTTTGTTTAAGCACTA
TTTGGTACTTATTTTTTGAGAAACAAATGATGCCTGCTTGTCGTATCAGTTTATAAGGCCTTGC
AATTGTGTTGTTCACCATCTATCTTTGCGTTCAATTCTTAGTTTAATTTTAGTCATTTGCTTAC
TCATTGTTTCTTACTTACCATATGTTTATTTTTATGCTTTATGAGCTCCCACTAAGCTTATGGA
ATTGAAAAAAAAACATTTTTCATTGTTAATTGTTACACTCAGTAATTTCCCATATGACCAAAGA
CCAGGGATTTGAGCCAAGGAAGCAGCCTCTAATGCTTGCATTAGGGCAGGTTGCCTACATCACA
CCCCTTGGGGTCCTTGATAAAAGTCAACCTACTTCCTAATAATTTTTTTTCGAAACATTGACCC
ATCTGAACAGCCCGGGAAAGGCTTGAGACTGAGGCAAGATCCTAGAATCATCTACCAAAACTTA
TGTCTTGCTTGATTTATAGGTTGCTTTGTTACACTGTTAAAACTTTTAAATAGGATTGTTTTTC
TGTTGCATCATTGTATTTTGTAGTCTACTCAATGCTTTTATGTTTTATTTCATGTAAAGACTTT
TTTTTGCCTGATCTTATTTAGACCTAATATTTATGATGTCCACATGTTCAGGTCTACTATATGG
ATTCACTCAAGTTCTTCCTATCACTCTATGGACATAAGTTGCCTGTATTGTGCATGGATATTTC
TTCAGATGGTGATCTGCTTGTCAGCGGCTCTGCGGACAAAAATGTGAAGATTTGGGGTTTAGAT
TTCGGGGACTGTCACAAGTCACTTTTTGCGCATGCTGATAGGTGCTTTGGTTAAATCGTTAAGT
AATCTAGTATTCAACTAGGTAACATTTTGCGATTAATAAATGCTGATTTTCTCTTTTCATGGCA
GTGTTATGGGAGTTAAGTTTGTGCGCAACACCCATTACTTTTTCACAGTGGGGAAAGATCGCTT
GGTGAAGTACTGGGATGCTGATAAGTTTGAGTTACTTTTAACCCTGGAAGGTCACCACGCGGAA
GTTTGGTGTCTTGCTATGAGCAACCGTGGGGATTTCATCGTTACTGGATCTCATGATCGGTCAA
TACGCCGTTGGGATCGTACTGATGAGCCCTTTTTTATTGAGGTATTGTGTGTTAATGTCTTAAA
TACTGTATCGATTAAAGACAGTTTAAGTAAGGAATTATAAGTTGCTACTTGGATTTGCAGGAAG
AGAAAGAAAAGAGATTGGAAGAGATGTTTGAATCAGACATTGACAATGCATTTGAGAATAAGTA
TGGATCAAAGGAAGAAATTCCAGAGGAGGGAGCTGTGGCATTAGCAGGGAAAAAGACTCAAGAA
ACTCTTACTGCCACAGATTCGATCATTGAAGCACTGGACATGGCAGATGCAGAACTGAAGCGAA
TCACTGAACATGAGGTTTCCTTTCTGCTTAACCTGGGAGGCGTCTTCTTACTGTTCTTCCTATA
CTGAAACAAGAGTTAGAAGAATAATTTAAACTAGAGAGTTTTTAGGTTTGATGCATATTTTTTT
TAGGCTTAAGCCTACTAAATAGAACATTCATAAAATGATTTTGGAGTATCCAAAATATTTTCAG
TGCAACTTATGAACAAGATTTTTATGAAGAAACTGACTTAATAAAGGTTGTCAAAGAGGCGGTT
ATCTAAAAATATGTGTCTTTTCCTTGCTTTCTCTTCTTCTTTGGAAACAGGTAATTGGATGTGG
AGGGTGATAAAGTGCTAGTTAATTAAATTTTTTTATAAAAAAGGAATCTTTTTTTTTTTGGACT
TGGTAATTTCTTGAATGGAGACTACTATGTTTATATGTAGGAGGACAAAACAAAGGGCAGAGTT
TCAGAATTCAGGTCTAATATTCTCATGCTCGGGCTATCTCCTTCTGATTATGTTCTTCGTGCAT
TGTCTAGTGTGCATACTAATGATCTGGAGCAAACTTTAATGGTAAGTGATTATTTTGAAGATTA
TATTTTAATTAGGAAAGTCCAGTTTTTTCAGTAATTAGTTCCTGACCTAAAATGTTATCTAACT
GTTTCAATTCGAATGCCATCTTTACAATTCCATACACTTGAGTTTAGAGCTTTAACCATGCATA
TTTTATTGAACTTAATTTTGAAAATTGCTACCTAGAGACGTTGTGCCTAATTGTGGGCCCACAG
TTTTTTTTTTTTTTTAATAATGGAAGTTTATTGGTCCCCCTCCCATTTAACTTCTGATGGTGCT
TAATTAAAGATGAACTGTCCTTTTGAGGGTAGTGAAATTAATCTGAAACCAGCCCAAATGGAAA
TCTTAAGTTCAATCTCAGAGGGTTTATGATTTTTGCCTAATTGTGTTTTGAGCATATTTTTGGA
CTTCTTTTGTCGATTGTAATTGTTCTATGTATTCTACATGATTGGTTTTTATTGCCTTTTTGAA
GCTTTTATAGCATTCTTACCAGTACCAACTAAATTGTGTCTGCCTTAACTCTCGAATGACTTAA
AAATAGACCAGACTCTTCTTTCCAGTTGTGTGGATTAGGCCATTAGATGATGGATATGCATGAT
AGTTCTTACTAGATATAATCAAGTAACAATCAAACTTCCTGCTTTGAGTATGGACATTAGTATG
TTTCTGTTCCTGGAGCCTATCTGTGGTTGAGATGGAGTCGATTGGAGTTCTGTATTTTACTCAA
AATTTATATTATGCCTCGAATCCATCTGCTTGGAAGGTATCCAAAAATGACCTTATGTGTCCAT
TCTTACATCATGTGTCACCCAGGAAAAGACTCCCAATATTTTCCTACCTCATAGTATCTAGTGT
CTTGTAGAATGACATCATTGAAAAACATAGCGTTAGTTTATTCTTGCTTTAATGCTTGATACAA
GGGTTGTATATCTCTCACTCCAATAATTTGTTACTCAATTCCAGAAAATTAATAATTCAATTTA
CCAAGCTTTACACATTAACATTTTTTTATCTCTTTGAATTTGTCTTTTCAATTGAGTTTAAATG
GTCTTGTATCCTTTCAATTTTGATTTTGTCTTATATATATGATTATATTTCACATACTCTTTGC
AGGCCTTACCCTTCTCTGATGCTTTGGATCTCTTGTCGTACCTGGAGAGTTGGGCCTCTGCAAT
CGATAAGGTTAATATTTTCTTTTAAGAAGATGTGAAGTTTGTTGCATGTATTTATATTATAAAA
CACAAATATTGTGTTTGAACTTTTGAAAACAAAGTAATTGAATTGAATTTGTCACATTAAGGTC
AGTCTCCAAAGATCTCCAAAGAGTGGAGAATCCGTAATTTTAGTAGTAGTCAACAATTTTCTTT
TTCTGTATTTTTTTTGTACAAAGTAAGCAATCAGCAAATCTTTGCACGTCAACATCAACTAGGT
AGTATTATGTTTCTGGACCTGTAATTGTACAAAGTATGCTTGCTTGAGTGAAGTTCTTGTCTTG
TGTTGTTTATAGTTATGTCCGATCTGTAATTTTACAGTAATTATCCTTCTAATGTTCTTGCAGG
TGGAGCTTGTTGGTAGGGTTGCAGTACTGCTAGTGCAACTTCATCATCACCAATTGGTTTCAAC
TGTCTCTGCCAGACCCCTCATTACCCGTCTAAGCGACAGTCTTGCTGCAAAAGTCAAA
						
					

			
		

Sequences
Splice junction sequence	AGTACTGCTAGTGCAACTTCATCATCACCAATTGGTTTCAACTGTCTCTGCCAGACCCCTCATT ACCCGTCTAAGCGACAGTCTTGCTGCAAAAGTCAAAgggtctaagcatttaactgcatctccga caagtagtttaaaaatgaatgatgatgttctagttgttgctgcgagccctgatggtaaatttat tgctgttg
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	GGGTCTAAGCATTTAACTGCATCTCCGACAAGTAGTTTAAAAATGAATGATGATGTTCTAGTTG TTGCTGCGAGCCCTGATGGTAAATTTATTGCTGTTGCCTTGTTGGATAGCACAGTAAAGGTAAC AGTCTTAACTTATTTGAATTGTATATGTTTTGATTAAAGTTGGACATTCTCATTTCATGGGACT TGGAAGTATTCATTATGAAAGTATTTGTGAAATTATCTGGTCAAATCACTTGGCTCTTTTTCTT GGAGTTTGTAATTACTCTTCACTCCTGGTACTGATTTTTACTATATTAGTTTGTTTAAGCACTA TTTGGTACTTATTTTTTGAGAAACAAATGATGCCTGCTTGTCGTATCAGTTTATAAGGCCTTGC AATTGTGTTGTTCACCATCTATCTTTGCGTTCAATTCTTAGTTTAATTTTAGTCATTTGCTTAC TCATTGTTTCTTACTTACCATATGTTTATTTTTATGCTTTATGAGCTCCCACTAAGCTTATGGA ATTGAAAAAAAAACATTTTTCATTGTTAATTGTTACACTCAGTAATTTCCCATATGACCAAAGA CCAGGGATTTGAGCCAAGGAAGCAGCCTCTAATGCTTGCATTAGGGCAGGTTGCCTACATCACA CCCCTTGGGGTCCTTGATAAAAGTCAACCTACTTCCTAATAATTTTTTTTCGAAACATTGACCC ATCTGAACAGCCCGGGAAAGGCTTGAGACTGAGGCAAGATCCTAGAATCATCTACCAAAACTTA TGTCTTGCTTGATTTATAGGTTGCTTTGTTACACTGTTAAAACTTTTAAATAGGATTGTTTTTC TGTTGCATCATTGTATTTTGTAGTCTACTCAATGCTTTTATGTTTTATTTCATGTAAAGACTTT TTTTTGCCTGATCTTATTTAGACCTAATATTTATGATGTCCACATGTTCAGGTCTACTATATGG ATTCACTCAAGTTCTTCCTATCACTCTATGGACATAAGTTGCCTGTATTGTGCATGGATATTTC TTCAGATGGTGATCTGCTTGTCAGCGGCTCTGCGGACAAAAATGTGAAGATTTGGGGTTTAGAT TTCGGGGACTGTCACAAGTCACTTTTTGCGCATGCTGATAGGTGCTTTGGTTAAATCGTTAAGT AATCTAGTATTCAACTAGGTAACATTTTGCGATTAATAAATGCTGATTTTCTCTTTTCATGGCA GTGTTATGGGAGTTAAGTTTGTGCGCAACACCCATTACTTTTTCACAGTGGGGAAAGATCGCTT GGTGAAGTACTGGGATGCTGATAAGTTTGAGTTACTTTTAACCCTGGAAGGTCACCACGCGGAA GTTTGGTGTCTTGCTATGAGCAACCGTGGGGATTTCATCGTTACTGGATCTCATGATCGGTCAA TACGCCGTTGGGATCGTACTGATGAGCCCTTTTTTATTGAGGTATTGTGTGTTAATGTCTTAAA TACTGTATCGATTAAAGACAGTTTAAGTAAGGAATTATAAGTTGCTACTTGGATTTGCAGGAAG AGAAAGAAAAGAGATTGGAAGAGATGTTTGAATCAGACATTGACAATGCATTTGAGAATAAGTA TGGATCAAAGGAAGAAATTCCAGAGGAGGGAGCTGTGGCATTAGCAGGGAAAAAGACTCAAGAA ACTCTTACTGCCACAGATTCGATCATTGAAGCACTGGACATGGCAGATGCAGAACTGAAGCGAA TCACTGAACATGAGGTTTCCTTTCTGCTTAACCTGGGAGGCGTCTTCTTACTGTTCTTCCTATA CTGAAACAAGAGTTAGAAGAATAATTTAAACTAGAGAGTTTTTAGGTTTGATGCATATTTTTTT TAGGCTTAAGCCTACTAAATAGAACATTCATAAAATGATTTTGGAGTATCCAAAATATTTTCAG TGCAACTTATGAACAAGATTTTTATGAAGAAACTGACTTAATAAAGGTTGTCAAAGAGGCGGTT ATCTAAAAATATGTGTCTTTTCCTTGCTTTCTCTTCTTCTTTGGAAACAGGTAATTGGATGTGG AGGGTGATAAAGTGCTAGTTAATTAAATTTTTTTATAAAAAAGGAATCTTTTTTTTTTTGGACT TGGTAATTTCTTGAATGGAGACTACTATGTTTATATGTAGGAGGACAAAACAAAGGGCAGAGTT TCAGAATTCAGGTCTAATATTCTCATGCTCGGGCTATCTCCTTCTGATTATGTTCTTCGTGCAT TGTCTAGTGTGCATACTAATGATCTGGAGCAAACTTTAATGGTAAGTGATTATTTTGAAGATTA TATTTTAATTAGGAAAGTCCAGTTTTTTCAGTAATTAGTTCCTGACCTAAAATGTTATCTAACT GTTTCAATTCGAATGCCATCTTTACAATTCCATACACTTGAGTTTAGAGCTTTAACCATGCATA TTTTATTGAACTTAATTTTGAAAATTGCTACCTAGAGACGTTGTGCCTAATTGTGGGCCCACAG TTTTTTTTTTTTTTTAATAATGGAAGTTTATTGGTCCCCCTCCCATTTAACTTCTGATGGTGCT TAATTAAAGATGAACTGTCCTTTTGAGGGTAGTGAAATTAATCTGAAACCAGCCCAAATGGAAA TCTTAAGTTCAATCTCAGAGGGTTTATGATTTTTGCCTAATTGTGTTTTGAGCATATTTTTGGA CTTCTTTTGTCGATTGTAATTGTTCTATGTATTCTACATGATTGGTTTTTATTGCCTTTTTGAA GCTTTTATAGCATTCTTACCAGTACCAACTAAATTGTGTCTGCCTTAACTCTCGAATGACTTAA AAATAGACCAGACTCTTCTTTCCAGTTGTGTGGATTAGGCCATTAGATGATGGATATGCATGAT AGTTCTTACTAGATATAATCAAGTAACAATCAAACTTCCTGCTTTGAGTATGGACATTAGTATG TTTCTGTTCCTGGAGCCTATCTGTGGTTGAGATGGAGTCGATTGGAGTTCTGTATTTTACTCAA AATTTATATTATGCCTCGAATCCATCTGCTTGGAAGGTATCCAAAAATGACCTTATGTGTCCAT TCTTACATCATGTGTCACCCAGGAAAAGACTCCCAATATTTTCCTACCTCATAGTATCTAGTGT CTTGTAGAATGACATCATTGAAAAACATAGCGTTAGTTTATTCTTGCTTTAATGCTTGATACAA GGGTTGTATATCTCTCACTCCAATAATTTGTTACTCAATTCCAGAAAATTAATAATTCAATTTA CCAAGCTTTACACATTAACATTTTTTTATCTCTTTGAATTTGTCTTTTCAATTGAGTTTAAATG GTCTTGTATCCTTTCAATTTTGATTTTGTCTTATATATATGATTATATTTCACATACTCTTTGC AGGCCTTACCCTTCTCTGATGCTTTGGATCTCTTGTCGTACCTGGAGAGTTGGGCCTCTGCAAT CGATAAGGTTAATATTTTCTTTTAAGAAGATGTGAAGTTTGTTGCATGTATTTATATTATAAAA CACAAATATTGTGTTTGAACTTTTGAAAACAAAGTAATTGAATTGAATTTGTCACATTAAGGTC AGTCTCCAAAGATCTCCAAAGAGTGGAGAATCCGTAATTTTAGTAGTAGTCAACAATTTTCTTT TTCTGTATTTTTTTTGTACAAAGTAAGCAATCAGCAAATCTTTGCACGTCAACATCAACTAGGT AGTATTATGTTTCTGGACCTGTAATTGTACAAAGTATGCTTGCTTGAGTGAAGTTCTTGTCTTG TGTTGTTTATAGTTATGTCCGATCTGTAATTTTACAGTAATTATCCTTCTAATGTTCTTGCAGG TGGAGCTTGTTGGTAGGGTTGCAGTACTGCTAGTGCAACTTCATCATCACCAATTGGTTTCAAC TGTCTCTGCCAGACCCCTCATTACCCGTCTAAGCGACAGTCTTGCTGCAAAAGTCAAA

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.183638806

Conservation Information
Conserved circRNAs	NA
PMCS	0.183638806

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							20781822-20785737(+)
						
					

						Potential amino acid sequence
						
							MNDDVLVVAASPDGKFIAVALLDSTVKVYYMDSLKFFLSLYGHKLPVLCMDISSDGDLLVSGSA
DKNVKIWGLDFGDCHKSLFAHADSVMGVKFVRNTHYFFTVGKDRLVKYWDADKFELLLTLEGHH
AEVWCLAMSNRGDFIVTGSHDRSIRRWDRTDEPFFIEEEKEKRLEEMFESDIDNAFENKYGSKE
EIPEEGAVALAGKKTQETLTATDSIIEALDMADAELKRITEHEEDKTKGRVSEFRSNILMLGLS
PSDYVLRALSSVHTNDLEQTLMALPFSDALDLLSYLESWASAIDKVELVGRVAVLLVQLHHHQL
VSTVSARPLITRLSDSLAAKVKGSKHLTASPTSSLKMNDDVLVVAASPDGKFIAVALLDSTVKV
YYMDSLKFFLSLYGHKLPVLCMDISSDGDLLVSGSADKNVKIWGLDFGDCHKSLFAHADSVMGV
KFVRNTHYFFTVGKDRLVKYWDADKFELLLTLEGHHAEVWCLAMSNRGDFIVTGSHDRSIRRWD
RTDEPFFIEEEKEKRLEEMFESDIDNAFENKYGSKEEIPEEGAVALAGKKTQETLTATDSIIEA
LDMADAELKRITEHEEDKTKGRVSEFRSNILMLGLSPSDYVLRALSSVHTNDLEQTLMALPFSD
ALDLLSYLESWASAIDKVELVGRVAVLLVQLHHHQLVSTVSARPLITRLSDSLAAKVKGSKHLT
ASPTSSLKMNDDVLVVAASPDGKFIAVALLDSTVKVYYMDSLKFFLSLYGHKLPVLCMDISSDG
DLLVSGSADKNVKIWGLDFGDCHKSLFAHADSVMGVKFVRNTHYFFTVGKDRLVKYWDADKFEL
LLTLEGHHAEVWCLAMSNRGDFIVTGSHDRSIRRWDRTDEPFFIEEEKEKRLEEMFESDIDNAF
ENKYGSKEEIPEEGAVALAGKKTQETLTATDSIIEALDMADAELKRITEHEEDKTKGRVSEFRS
NILMLGLSPSDYVLRALSSVHTNDLEQTLMALPFSDALDLLSYLESWASAIDKVELVGRVAVLL
VQLHHHQLVSTVSARPLITRLSDSLAAKVKGSKHLTASPTSSLKMNDDVLVVAASPDGKFIAVA
LLDSTVKVYYMDSLKFFLSLYGHKLPVLCMDISSDGDLLVSGSADKNVKIWGLDFGDCHKSLFA
HADSVMGVKFVRNTHYFFTVGKDRLVKYWDADKFELLLTLEGHHAEVWCLAMSNRGDFIVTGSH
DRSIRRWDRTDEPFFIEEEKEKRLEEMFESDIDNAFENKYGSKEEIPEEGAVALAGKKTQETLT
ATDSIIEALDMADAELKRITEHEEDKTKGRVSEFRSNILMLGLSPSDYVLRALSSVHTNDLEQT
LMALPFSDALDLLSYLESWASAIDKVELVGRVAVLLVQLHHHQLVSTVSARPLITRLSDSLAAK
VK(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	20781822-20785737(+)
Potential amino acid sequence	MNDDVLVVAASPDGKFIAVALLDSTVKVYYMDSLKFFLSLYGHKLPVLCMDISSDGDLLVSGSA DKNVKIWGLDFGDCHKSLFAHADSVMGVKFVRNTHYFFTVGKDRLVKYWDADKFELLLTLEGHH AEVWCLAMSNRGDFIVTGSHDRSIRRWDRTDEPFFIEEEKEKRLEEMFESDIDNAFENKYGSKE EIPEEGAVALAGKKTQETLTATDSIIEALDMADAELKRITEHEEDKTKGRVSEFRSNILMLGLS PSDYVLRALSSVHTNDLEQTLMALPFSDALDLLSYLESWASAIDKVELVGRVAVLLVQLHHHQL VSTVSARPLITRLSDSLAAKVKGSKHLTASPTSSLKMNDDVLVVAASPDGKFIAVALLDSTVKV YYMDSLKFFLSLYGHKLPVLCMDISSDGDLLVSGSADKNVKIWGLDFGDCHKSLFAHADSVMGV KFVRNTHYFFTVGKDRLVKYWDADKFELLLTLEGHHAEVWCLAMSNRGDFIVTGSHDRSIRRWD RTDEPFFIEEEKEKRLEEMFESDIDNAFENKYGSKEEIPEEGAVALAGKKTQETLTATDSIIEA LDMADAELKRITEHEEDKTKGRVSEFRSNILMLGLSPSDYVLRALSSVHTNDLEQTLMALPFSD ALDLLSYLESWASAIDKVELVGRVAVLLVQLHHHQLVSTVSARPLITRLSDSLAAKVKGSKHLT ASPTSSLKMNDDVLVVAASPDGKFIAVALLDSTVKVYYMDSLKFFLSLYGHKLPVLCMDISSDG DLLVSGSADKNVKIWGLDFGDCHKSLFAHADSVMGVKFVRNTHYFFTVGKDRLVKYWDADKFEL LLTLEGHHAEVWCLAMSNRGDFIVTGSHDRSIRRWDRTDEPFFIEEEKEKRLEEMFESDIDNAF ENKYGSKEEIPEEGAVALAGKKTQETLTATDSIIEALDMADAELKRITEHEEDKTKGRVSEFRS NILMLGLSPSDYVLRALSSVHTNDLEQTLMALPFSDALDLLSYLESWASAIDKVELVGRVAVLL VQLHHHQLVSTVSARPLITRLSDSLAAKVKGSKHLTASPTSSLKMNDDVLVVAASPDGKFIAVA LLDSTVKVYYMDSLKFFLSLYGHKLPVLCMDISSDGDLLVSGSADKNVKIWGLDFGDCHKSLFA HADSVMGVKFVRNTHYFFTVGKDRLVKYWDADKFELLLTLEGHHAEVWCLAMSNRGDFIVTGSH DRSIRRWDRTDEPFFIEEEKEKRLEEMFESDIDNAFENKYGSKEEIPEEGAVALAGKKTQETLT ATDSIIEALDMADAELKRITEHEEDKTKGRVSEFRSNILMLGLSPSDYVLRALSSVHTNDLEQT LMALPFSDALDLLSYLESWASAIDKVELVGRVAVLLVQLHHHQLVSTVSARPLITRLSDSLAAK VK(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zuo et al., 2016

circRNA

Detail information of Solyc10g039190.1_circ_g.1

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