Plant Circular RNA Database

Detail information of Csa4G337860_circ_g.2

			
						 General Information
					
						CircRNA Name
						Csa4G337860_circ_g.2
					
						ID in PlantcircBase
						csa_circ_002627
					
						Alias
						Chr4:13794643_13798740
					
						Organism
						
							Cucumis sativus						
					
						Position
						
							chrChr4: 13794643-13798740  JBrowse»						
					
						Reference genome
						
							Cucumis sativus v1.5						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Csa4G337860						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						+
					
						Alternative splicing
						
							Csa4G337860_circ_g.1 Csa4G337860_circ_g.3 						
					
						Support reads
						NA
					
						Tissues
						leaf,root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Csa4G337860.1:6

General Information
CircRNA Name	Csa4G337860_circ_g.2
ID in PlantcircBase	csa_circ_002627
Alias	Chr4:13794643_13798740
Organism	Cucumis sativus
Position	chrChr4: 13794643-13798740 JBrowse»
Reference genome	Cucumis sativus v1.5
Type	e-circRNA
Identification method	CIRI2
Parent gene	Csa4G337860
Parent gene annotation	NA
Parent gene strand	+
Alternative splicing	Csa4G337860_circ_g.1 Csa4G337860_circ_g.3
Support reads	NA
Tissues	leaf,root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Csa4G337860.1:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CCAGACTGCAATACCAACAACATTTACATCACTAGTGATCAGGATCTCATTATATCTTACTGCA
AGGCTGATTCTGATGATCATTGGATGGTAGGAAATGgaggaatatgatactcatgatccaaagg
ggcattgttcacctgttttaccttttctgatgaagaggacgaaagtaattgaaattgttgctgc
acgtgata

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 970
Transcript exons: 13794643-13794790,13794896-13795046,13795145-13795270,13
795355-13795435,13798177-13798369,13798470-13798740
GAGGAATATGATACTCATGATCCAAAGGGGCATTGTTCACCTGTTTTACCTTTTCTGATGAAGA
GGACGAAAGTAATTGAAATTGTTGCTGCACGTGATATTGTTTTTGCTCTAGCACATTCTGGTGT
TTGTGCAGCTTTTAGCAGGGAGACAAATGAAAGAATATGCTTCTTGAATGTCAGTCCTGATGAG
GTCATTCGCAGTTTGTTTTACAATAAGAACAATGATTCACTTATCACAGTTTCAGTTTATGCTT
CTGATAACTTCAGTTCTTTGAAATGCAGATCTACAAGGATCGAATACATTCGAAGGGGCAAACC
TGATGCAGGTTTTGCACTTTTTGAGTCTGAATCGTTGAAGTGGCCTGGATTTGTTGAGTTTGAT
GATGTTAATGGTAAAGTTTTAACCTACTCTGCACAAGATAGTATATACAAGGTGTTTGACCTGA
AAAACTATACCATGCTTTACTCTATATCAGATAAGCATGTTCAAGAAATCAAGATCAGCCCTGG
AATCATGTTGTTGATCTTCAATAGAGCCAGTAGCCATGTTCCTCTTAAGATTCTGTCTATAGAA
GATGGTACAGTTCTCAAAGCTTTCAACCATCTGCTTCATCGGAACAAGAAAGTCGACTTCATAG
AACAATTTAATGAAAAACTTCTTGTGAAGCAAGAAAATGAAAATCTTCAAATACTTGATGTTCG
CAATGCTGAATTGATGGAAGTTAGCAGAACTGAATTTATGACCCCATCAGCATTTATCTTTCTG
TATGAAAACCAATTGTTCTTGACATTTAGAGACCGAACTGTTGCTGTCTGGAACTTTCGTGGGG
AGCTTGTAACCTCTTTTGAGGATCACCTTTTATGGCATCCAGACTGCAATACCAACAACATTTA
CATCACTAGTGATCAGGATCTCATTATATCTTACTGCAAGGCTGATTCTGATGATCATTGGATG
GTAGGAAATG
						
					

						Genomic sequence
						
							GAGGAATATGATACTCATGATCCAAAGGGGCATTGTTCACCTGTTTTACCTTTTCTGATGAAGA
GGACGAAAGTAATTGAAATTGTTGCTGCACGTGATATTGTTTTTGCTCTAGCACATTCTGGTGT
TTGTGCAGCTTTTAGCAGGGGTAATTGCAGTATTTATTTCCAAATCATTTTTCTATAATGCATG
TGAAGAAAATATTTTTCTTAAATGAAAATTCCGAAATGACATTGTTGGTTATTTTGTGCAGAGA
CAAATGAAAGAATATGCTTCTTGAATGTCAGTCCTGATGAGGTCATTCGCAGTTTGTTTTACAA
TAAGAACAATGATTCACTTATCACAGTTTCAGTTTATGCTTCTGATAACTTCAGTTCTTTGAAA
TGCAGATCTACAAGGATCGAGTGCGTAAAATTCCATTGCTTATGTTTAGACTGTTCGATTTCTT
TGATTCAATGCTTATATTTATCTCTAACTGATATTTCCTCCCGAAATTTATTAGATACATTCGA
AGGGGCAAACCTGATGCAGGTTTTGCACTTTTTGAGTCTGAATCGTTGAAGTGGCCTGGATTTG
TTGAGTTTGATGATGTTAATGGTAAAGTTTTAACCTACTCTGCACAAGATAGGTAACTTGCTTC
CCTTTTATTGTTTTTTGTTTCATTCTATCACTGTCTGTAACTTTTTTCATTTTCCCACTCTTTT
GTTACCAGTATATACAAGGTGTTTGACCTGAAAAACTATACCATGCTTTACTCTATATCAGATA
AGCATGTTCAAGAAATCAAGATCAGGTAATTCTATCTACTTTTCTATTCTTTGGTGCTATGTAA
AAAGAAAATTCAATGAACAAATTTGTCTTCGGATGACTCTTCATGCTTATTACAAGTGAGAATG
ATAGAAAATTGAACATATATTAGAATGTGGAGATTTATATCTAGATTTAATAAGGCAACTCTCT
TGATTGATTTGTCTTATTTTTCAGAAGATAATGTATCACCTATATTATGCAACTCCTTGTGGAT
GCATATGATAAAACTTATATTATCAACTTACCTTTGTTGTGTAAGTTCTTCTTCTTCTTCTTCT
GAATTTAAGAGGGCACCATTATGTGTTTCAATGGGTCATTTCATGTGTACATTCTATGTATGTG
CTTTTTAGGGGTTTTTTAAAAGTGAAAACAACGTTTTTTTTTTTTTTTTTGCATTAAAACCAGA
TCTTCAAAGTAGATAAATTTGCTTTCAGTAAAATAAAATTTGCTTTCAGTAAAATAAAGTTCAA
TACAAACACAAAGCCATTGAAAAACTTAAAGAAAGGTTCAACAGTGAATTGTACTTTACAGCTC
AATTACAAGCAATGCAATAGAGAGAAAAGGCAAACTATCTATCAAAGTTTAACCAACTCACGAT
CTAACTATTGATGGGGGTTTGGCAAACAACACTTGAGAACTGACATGTAGTTGTGAACTGAGAA
TGCGTTGATTTCAGTATTTGGGAGGTGGCTGATGTGTAGGTAGCATGCCAAATCGCTTCTTAAG
AACTCTTTCTTTTGAATATTTTTCATTGGGAGAGAAACGTGCTGGATAAGCAGTTTGTGTGGCC
AAACCTAGAGGAGATTCTTCTTTGTGGTGTGGACTTTATCACCATTGTTGTTTATGTAAAACTA
ATGATACATAGTTGGACACTCAATGAGATGAAAAGAGGTGCAACAAAAGGCGAATAGTGGCGCG
ACAGAGAACGGATGATGGCGGTGCAAGACAAATGGTGAGTGGTGACAGAGCCCATAAAAAGGGG
GGAGCTTCCCTCTACAAGAAGGGATTCCAACTATGTTGTTTTTAGGTGGTGAATAGGAAAACAC
TCTAATTTAGGTTGAGTGTCCATGTTGGACATAGATTTGTTTAAACACACTTGGAGGACCAAAA
ATATGTGGCCAAGGTTATCAGAGTAGTACGATATGCTCTGATGACAATTTTGGGATCAAGGTTA
CCAGAGTAGTATGATTGGCGATGTATCGTGAATTTAAAATAGAATGTAAGGATTCAGAATTGTA
TGATCGACCATATGTGTCGTGAGTTTAAATGGAACAAAAGCTGTATGATTTGAAATGCTCTTTT
GAATTAGAAATCAACAAAAATGTACATGATTCCAGAGTTTGATGATAAGCAGTCGTGTTCACAT
AGGTGATTGAAATAATAAGGCAGATAAGAAAAGTGGGTTGGAAGAAGATGAGTAGAAGCGTGAT
GAGTTAGGAACTTGAGAAGAGGTGATTAAATAGAGTTGTCACTTTTGAAAGAAGATGGAAGGTT
GGAGATAAAGCAAGGTAGCAACTAGAAAGTTGACCATCAATTGGTGAGCCTAATCAATTTTGTA
ATGGGCCAGCTAACTACAGCATTGATGGGTTTTAAAAAGTAGCATCAGTGACCATCAAACTAGG
TTTTCTGAAAGTATGAAAGAAAGTGGATTCTTTTGCTTGCTTCATTTTGGTATTCTCTTTTGGC
ATTTCCGTTAAGACTTTAAAAGGACGAGGAGATCGATCTTTTGAAAGTCATTGTTGGAGGGACT
GACATAAGCTTAGTTTGGGAGAATGGAGCTTAGAGTCTTTGGGTGTAACTTGGAACTATTAAAA
TAAATTTTCCTAAAGAACCCTGAATGTCTTATATCTATGATCAACATGGTGAGAAAAGAAAAGG
CCACTCCATGTTGTTGAAGTGTCATTAAGGTGCTACCTATGCCAAGTCCACTACTCATCGCTCC
TCTTGTTTGTCTCCCGTTCCATGTGAAATATAAAGATTAAGATTAATGCTATTGTAGGCTTCTT
GTTATAATGTTGTACTATGCACATACCTTTGCATTGTACTATTTATTAGATCTTATGCAGGTTC
CTTTTCTTTTGAAACTTCGATGAATTCAGTGCCAAAATAGCAATGTTCTCCTTCATTTTTTTAG
CATTGATGTCTGTCTTCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCC
CCCAAGATAATTTTATTCTTAAGACCATCTTTCTACATAAGTCAAAATGTTCTGGTATTCTTAG
TGTGAATTGTGTAAAAGGGATAACCATCCAGCTATTCACATTGTGGGCTAAAGAACTTTGTGTT
TTCTAGAACTTGTGGGGGAGGCACAGTGTATGTTAACTGCAGAAGAAAATGATTCATAGAACTT
TTTGGCATGGTTTGTTACGGTATGCAACTCTTTGCAGAATTGTATATGAACTTAGTGGATACAT
AGCTGGTAGAAAGTAATCACGATAAATTGTTCTTGGAATAAAAAAAGACCAATTAAGTTTTTCC
TTTTCCCTCTCTCCCTTCCTCATATGAATTGGGTTGTGGCAGCTGATTGTCAAAACAATTTTGG
TTGATTTTGTTGCATAATTAATTTGATTGAAGAAGCCTTGGACTGTTGAATTTTAAATTTTCCG
GAAATCTTTGGGCTGTTTGTTAGTTGGAGATTGTCTTTATGTGTTGATTAAACGATGTTCTACC
TTTTATTGTTGTAGCCCTGGAATCATGTTGTTGATCTTCAATAGAGCCAGTAGCCATGTTCCTC
TTAAGATTCTGTCTATAGAAGATGGTACAGTTCTCAAAGCTTTCAACCATCTGCTTCATCGGAA
CAAGAAAGTCGACTTCATAGAACAATTTAATGAAAAACTTCTTGTGAAGCAAGAAAATGAAAAT
CTTCAAATACTTGATGTAAGTAAAGATTCTTATGTGTAAGTGTAACTTTATGAAAAACTTCTCG
TCCCGATTTGTGAAGTAATTTTAATAGTAGAAATGTTGTCACTTTTTATAGGTTCGCAATGCTG
AATTGATGGAAGTTAGCAGAACTGAATTTATGACCCCATCAGCATTTATCTTTCTGTATGAAAA
CCAATTGTTCTTGACATTTAGAGACCGAACTGTTGCTGTCTGGAACTTTCGTGGGGAGCTTGTA
ACCTCTTTTGAGGATCACCTTTTATGGCATCCAGACTGCAATACCAACAACATTTACATCACTA
GTGATCAGGATCTCATTATATCTTACTGCAAGGCTGATTCTGATGATCATTGGATGGTAGGAAA
TG
						
					

			
		

Sequences
Splice junction sequence	CCAGACTGCAATACCAACAACATTTACATCACTAGTGATCAGGATCTCATTATATCTTACTGCA AGGCTGATTCTGATGATCATTGGATGGTAGGAAATGgaggaatatgatactcatgatccaaagg ggcattgttcacctgttttaccttttctgatgaagaggacgaaagtaattgaaattgttgctgc acgtgata
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 970 Transcript exons: 13794643-13794790,13794896-13795046,13795145-13795270,13 795355-13795435,13798177-13798369,13798470-13798740 GAGGAATATGATACTCATGATCCAAAGGGGCATTGTTCACCTGTTTTACCTTTTCTGATGAAGA GGACGAAAGTAATTGAAATTGTTGCTGCACGTGATATTGTTTTTGCTCTAGCACATTCTGGTGT TTGTGCAGCTTTTAGCAGGGAGACAAATGAAAGAATATGCTTCTTGAATGTCAGTCCTGATGAG GTCATTCGCAGTTTGTTTTACAATAAGAACAATGATTCACTTATCACAGTTTCAGTTTATGCTT CTGATAACTTCAGTTCTTTGAAATGCAGATCTACAAGGATCGAATACATTCGAAGGGGCAAACC TGATGCAGGTTTTGCACTTTTTGAGTCTGAATCGTTGAAGTGGCCTGGATTTGTTGAGTTTGAT GATGTTAATGGTAAAGTTTTAACCTACTCTGCACAAGATAGTATATACAAGGTGTTTGACCTGA AAAACTATACCATGCTTTACTCTATATCAGATAAGCATGTTCAAGAAATCAAGATCAGCCCTGG AATCATGTTGTTGATCTTCAATAGAGCCAGTAGCCATGTTCCTCTTAAGATTCTGTCTATAGAA GATGGTACAGTTCTCAAAGCTTTCAACCATCTGCTTCATCGGAACAAGAAAGTCGACTTCATAG AACAATTTAATGAAAAACTTCTTGTGAAGCAAGAAAATGAAAATCTTCAAATACTTGATGTTCG CAATGCTGAATTGATGGAAGTTAGCAGAACTGAATTTATGACCCCATCAGCATTTATCTTTCTG TATGAAAACCAATTGTTCTTGACATTTAGAGACCGAACTGTTGCTGTCTGGAACTTTCGTGGGG AGCTTGTAACCTCTTTTGAGGATCACCTTTTATGGCATCCAGACTGCAATACCAACAACATTTA CATCACTAGTGATCAGGATCTCATTATATCTTACTGCAAGGCTGATTCTGATGATCATTGGATG GTAGGAAATG
Genomic sequence	GAGGAATATGATACTCATGATCCAAAGGGGCATTGTTCACCTGTTTTACCTTTTCTGATGAAGA GGACGAAAGTAATTGAAATTGTTGCTGCACGTGATATTGTTTTTGCTCTAGCACATTCTGGTGT TTGTGCAGCTTTTAGCAGGGGTAATTGCAGTATTTATTTCCAAATCATTTTTCTATAATGCATG TGAAGAAAATATTTTTCTTAAATGAAAATTCCGAAATGACATTGTTGGTTATTTTGTGCAGAGA CAAATGAAAGAATATGCTTCTTGAATGTCAGTCCTGATGAGGTCATTCGCAGTTTGTTTTACAA TAAGAACAATGATTCACTTATCACAGTTTCAGTTTATGCTTCTGATAACTTCAGTTCTTTGAAA TGCAGATCTACAAGGATCGAGTGCGTAAAATTCCATTGCTTATGTTTAGACTGTTCGATTTCTT TGATTCAATGCTTATATTTATCTCTAACTGATATTTCCTCCCGAAATTTATTAGATACATTCGA AGGGGCAAACCTGATGCAGGTTTTGCACTTTTTGAGTCTGAATCGTTGAAGTGGCCTGGATTTG TTGAGTTTGATGATGTTAATGGTAAAGTTTTAACCTACTCTGCACAAGATAGGTAACTTGCTTC CCTTTTATTGTTTTTTGTTTCATTCTATCACTGTCTGTAACTTTTTTCATTTTCCCACTCTTTT GTTACCAGTATATACAAGGTGTTTGACCTGAAAAACTATACCATGCTTTACTCTATATCAGATA AGCATGTTCAAGAAATCAAGATCAGGTAATTCTATCTACTTTTCTATTCTTTGGTGCTATGTAA AAAGAAAATTCAATGAACAAATTTGTCTTCGGATGACTCTTCATGCTTATTACAAGTGAGAATG ATAGAAAATTGAACATATATTAGAATGTGGAGATTTATATCTAGATTTAATAAGGCAACTCTCT TGATTGATTTGTCTTATTTTTCAGAAGATAATGTATCACCTATATTATGCAACTCCTTGTGGAT GCATATGATAAAACTTATATTATCAACTTACCTTTGTTGTGTAAGTTCTTCTTCTTCTTCTTCT GAATTTAAGAGGGCACCATTATGTGTTTCAATGGGTCATTTCATGTGTACATTCTATGTATGTG CTTTTTAGGGGTTTTTTAAAAGTGAAAACAACGTTTTTTTTTTTTTTTTTGCATTAAAACCAGA TCTTCAAAGTAGATAAATTTGCTTTCAGTAAAATAAAATTTGCTTTCAGTAAAATAAAGTTCAA TACAAACACAAAGCCATTGAAAAACTTAAAGAAAGGTTCAACAGTGAATTGTACTTTACAGCTC AATTACAAGCAATGCAATAGAGAGAAAAGGCAAACTATCTATCAAAGTTTAACCAACTCACGAT CTAACTATTGATGGGGGTTTGGCAAACAACACTTGAGAACTGACATGTAGTTGTGAACTGAGAA TGCGTTGATTTCAGTATTTGGGAGGTGGCTGATGTGTAGGTAGCATGCCAAATCGCTTCTTAAG AACTCTTTCTTTTGAATATTTTTCATTGGGAGAGAAACGTGCTGGATAAGCAGTTTGTGTGGCC AAACCTAGAGGAGATTCTTCTTTGTGGTGTGGACTTTATCACCATTGTTGTTTATGTAAAACTA ATGATACATAGTTGGACACTCAATGAGATGAAAAGAGGTGCAACAAAAGGCGAATAGTGGCGCG ACAGAGAACGGATGATGGCGGTGCAAGACAAATGGTGAGTGGTGACAGAGCCCATAAAAAGGGG GGAGCTTCCCTCTACAAGAAGGGATTCCAACTATGTTGTTTTTAGGTGGTGAATAGGAAAACAC TCTAATTTAGGTTGAGTGTCCATGTTGGACATAGATTTGTTTAAACACACTTGGAGGACCAAAA ATATGTGGCCAAGGTTATCAGAGTAGTACGATATGCTCTGATGACAATTTTGGGATCAAGGTTA CCAGAGTAGTATGATTGGCGATGTATCGTGAATTTAAAATAGAATGTAAGGATTCAGAATTGTA TGATCGACCATATGTGTCGTGAGTTTAAATGGAACAAAAGCTGTATGATTTGAAATGCTCTTTT GAATTAGAAATCAACAAAAATGTACATGATTCCAGAGTTTGATGATAAGCAGTCGTGTTCACAT AGGTGATTGAAATAATAAGGCAGATAAGAAAAGTGGGTTGGAAGAAGATGAGTAGAAGCGTGAT GAGTTAGGAACTTGAGAAGAGGTGATTAAATAGAGTTGTCACTTTTGAAAGAAGATGGAAGGTT GGAGATAAAGCAAGGTAGCAACTAGAAAGTTGACCATCAATTGGTGAGCCTAATCAATTTTGTA ATGGGCCAGCTAACTACAGCATTGATGGGTTTTAAAAAGTAGCATCAGTGACCATCAAACTAGG TTTTCTGAAAGTATGAAAGAAAGTGGATTCTTTTGCTTGCTTCATTTTGGTATTCTCTTTTGGC ATTTCCGTTAAGACTTTAAAAGGACGAGGAGATCGATCTTTTGAAAGTCATTGTTGGAGGGACT GACATAAGCTTAGTTTGGGAGAATGGAGCTTAGAGTCTTTGGGTGTAACTTGGAACTATTAAAA TAAATTTTCCTAAAGAACCCTGAATGTCTTATATCTATGATCAACATGGTGAGAAAAGAAAAGG CCACTCCATGTTGTTGAAGTGTCATTAAGGTGCTACCTATGCCAAGTCCACTACTCATCGCTCC TCTTGTTTGTCTCCCGTTCCATGTGAAATATAAAGATTAAGATTAATGCTATTGTAGGCTTCTT GTTATAATGTTGTACTATGCACATACCTTTGCATTGTACTATTTATTAGATCTTATGCAGGTTC CTTTTCTTTTGAAACTTCGATGAATTCAGTGCCAAAATAGCAATGTTCTCCTTCATTTTTTTAG CATTGATGTCTGTCTTCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCC CCCAAGATAATTTTATTCTTAAGACCATCTTTCTACATAAGTCAAAATGTTCTGGTATTCTTAG TGTGAATTGTGTAAAAGGGATAACCATCCAGCTATTCACATTGTGGGCTAAAGAACTTTGTGTT TTCTAGAACTTGTGGGGGAGGCACAGTGTATGTTAACTGCAGAAGAAAATGATTCATAGAACTT TTTGGCATGGTTTGTTACGGTATGCAACTCTTTGCAGAATTGTATATGAACTTAGTGGATACAT AGCTGGTAGAAAGTAATCACGATAAATTGTTCTTGGAATAAAAAAAGACCAATTAAGTTTTTCC TTTTCCCTCTCTCCCTTCCTCATATGAATTGGGTTGTGGCAGCTGATTGTCAAAACAATTTTGG TTGATTTTGTTGCATAATTAATTTGATTGAAGAAGCCTTGGACTGTTGAATTTTAAATTTTCCG GAAATCTTTGGGCTGTTTGTTAGTTGGAGATTGTCTTTATGTGTTGATTAAACGATGTTCTACC TTTTATTGTTGTAGCCCTGGAATCATGTTGTTGATCTTCAATAGAGCCAGTAGCCATGTTCCTC TTAAGATTCTGTCTATAGAAGATGGTACAGTTCTCAAAGCTTTCAACCATCTGCTTCATCGGAA CAAGAAAGTCGACTTCATAGAACAATTTAATGAAAAACTTCTTGTGAAGCAAGAAAATGAAAAT CTTCAAATACTTGATGTAAGTAAAGATTCTTATGTGTAAGTGTAACTTTATGAAAAACTTCTCG TCCCGATTTGTGAAGTAATTTTAATAGTAGAAATGTTGTCACTTTTTATAGGTTCGCAATGCTG AATTGATGGAAGTTAGCAGAACTGAATTTATGACCCCATCAGCATTTATCTTTCTGTATGAAAA CCAATTGTTCTTGACATTTAGAGACCGAACTGTTGCTGTCTGGAACTTTCGTGGGGAGCTTGTA ACCTCTTTTGAGGATCACCTTTTATGGCATCCAGACTGCAATACCAACAACATTTACATCACTA GTGATCAGGATCTCATTATATCTTACTGCAAGGCTGATTCTGATGATCATTGGATGGTAGGAAA TG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						1.002981521

Conservation Information
Conserved circRNAs	NA
PMCS	1.002981521

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							13794701-13794650(+)
13798739-13794650(+)
						
						Potential amino acid sequence
						
							MKRTKVIEIVAARDIVFALAHSGVCAAFSRETNERICFLNVSPDEVIRSLFYNKNNDSLITVSV
YASDNFSSLKCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVF
DLKNYTMLYSISDKHVQEIKISPGIMLLIFNRASSHVPLKILSIEDGTVLKAFNHLLHRNKKVD
FIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRDRTVAVWNF
RGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDHWMVGNGGI*
MEEYDTHDPKGHCSPVLPFLMKRTKVIEIVAARDIVFALAHSGVCAAFSRETNERICFLNVSPD
EVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEF
DDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKISPGIMLLIFNRASSHVPLKILSI
EDGTVLKAFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIF
LYENQLFLTFRDRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDHW
MVGNGGI*
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	13794701-13794650(+) 13798739-13794650(+)
Potential amino acid sequence	MKRTKVIEIVAARDIVFALAHSGVCAAFSRETNERICFLNVSPDEVIRSLFYNKNNDSLITVSV YASDNFSSLKCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVF DLKNYTMLYSISDKHVQEIKISPGIMLLIFNRASSHVPLKILSIEDGTVLKAFNHLLHRNKKVD FIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRDRTVAVWNF RGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDHWMVGNGGI* MEEYDTHDPKGHCSPVLPFLMKRTKVIEIVAARDIVFALAHSGVCAAFSRETNERICFLNVSPD EVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEF DDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKISPGIMLLIFNRASSHVPLKILSI EDGTVLKAFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIF LYENQLFLTFRDRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDHW MVGNGGI*
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zhu et al., 2019

circRNA

Detail information of Csa4G337860_circ_g.2

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