CircRNA Name |
BGIOSGA003203_circ_ig.5 |
ID in PlantcircBase |
osi_circ_011492 |
Alias |
Chr01:9105557_9106689(MH63RS2), Chr01:8894989_8896121(ZS97RS2), Chr01:9105557_9106689(MH63RS2) |
Organism |
Oryza sativa ssp. indica |
Position |
chr1: 9789225-9790357 JBrowse» |
Reference genome |
Oryza_indica.ASM465v1.42 |
Type |
ig-circRNA
|
Identification method |
CIRI2, find_circ, CIRI2, CIRI2, find_circ |
Parent gene |
NA |
Parent gene annotation |
NA |
Parent gene strand |
NA |
Alternative splicing |
BGIOSGA003203_circ_ig.1 BGIOSGA003203_circ_ig.2 BGIOSGA003203_circ_ig.3 BGIOSGA003203_circ_ig.4 |
Support reads |
NA |
Tissues |
root, leaf, panicle |
Exon boundary |
NA-NA
"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
|
Splicing signals |
GT-CA
The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
|
Number of exons covered |
NA
|