Plant Circular RNA Database

Detail information of Os01g0631100_circ_g.4

			
						 General Information
					
						CircRNA Name
						Os01g0631100_circ_g.4
					
						ID in PlantcircBase
						osa_circ_002803
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr1: 25228174-25231628  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os01g0631100						
					
						Parent gene annotation
						
							Cas1p-like family protein. (Os01t0631100-01);Similar to predicte
d protein. (Os01t0631100-02)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os01g0631100_circ_g.1 Os01g0631100_circ_g.2 Os01g0631100_circ_g.3 						
					
						Support reads
						1
					
						Tissues
						shoot
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os01t0631100-01:9
Os01t0631100-02:7

General Information
CircRNA Name	Os01g0631100_circ_g.4
ID in PlantcircBase	osa_circ_002803
Alias	NA
Organism	Oryza sativa
Position	chr1: 25228174-25231628 JBrowse»
Reference genome	IRGSP-1.0.38
Type	ue-circRNA
Identification method	CIRCexplorer
Parent gene	Os01g0631100
Parent gene annotation	Cas1p-like family protein. (Os01t0631100-01);Similar to predicte d protein. (Os01t0631100-02)
Parent gene strand	+
Alternative splicing	Os01g0631100_circ_g.1 Os01g0631100_circ_g.2 Os01g0631100_circ_g.3
Support reads	1
Tissues	shoot
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os01t0631100-01:9 Os01t0631100-02:7

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CTCTGTCATACAGGTTGAAAGATGGATGGAAAAGCTTGAAGAATCTGAAACTAAGGTTAGGTTG
TCAATTAAGGGAACCATCATTAGTATTTCCTTGGTGgtgtcatttttgcttggtctattccctg
ttctcattgcatggatctattcagaagtcctggagtacagaaaatcttcgtctatgaaagtgta
agttagct

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1122
Transcript exons: 25228174-25228262,25228385-25228513,25228599-25228655,25
228733-25228805,25229398-25229556,25230644-25230793,2523
0902-25231157,25231247-25231368,25231542-25231628
GTGTCATTTTTGCTTGGTCTATTCCCTGTTCTCATTGCATGGATCTATTCAGAAGTCCTGGAGT
ACAGAAAATCTTCGTCTATGAAAGTTCACTCCGATTCCAATTTGGAGAATGGAACTGTCAAAGA
AGATGATAAAACGGTATTGCTGGAAGGAGGCCTGTCAAAGTCACCATCTACAAAGTTTCGGATC
AATTCTACAAAAGCAAACCTCATAAGGTTTATAACAATGGATGAATCTTTCCTTCTGGAAAATC
GTGCTGTACTGAGAGCAATGGCAGAATTTGGCATCGTTCTGGTTTATTTCTACATTTGTGATCG
GACAAACATATTTCCAGAAAGCAAGAAGAGTTACAACCGTGATCTGTTTCTGTTTTTATACATT
CTTCTCATCATAGCATCAGCATTAACATCACTTAAGAAGCACCATGACAAATCAGCATTCTCAG
GGAAATCTATACTCTATCTTAATCGCCATCAAACAGAGGAATGGAAAGGTTGGATGCAGGTCCT
GTTTTTAATGTACCACTATTTTGCCGCCACTGAAATATACAATGCAATTCGTGTTTTCATTGCT
GCCTATGTCTGGATGACTGGATTTGGGAACTTCTCATACTATTATATTAAGAAAGACTTTAGTC
TTGCCAGATTTGCTCAGATGATGTGGAGACTTAATTTTTTTGTGGCTTTCTGCTGCATTGTCCT
TGACAATGATTACATGCTCTATTACATATGCCCAATGCACACTTTGTTTACTCTTATGGTATAT
GGGTCCCTTGGTCTCTTTAATAAGTATAATGAGATACCTTCAGTGATGGCAATGAAGATTGTCA
GCTGCTTCTTAGCAGTGATCTTGATATGGGAAATTCCTGGTGTATTTGAACTGCTGTGGAGTCC
ATTTACATTTCTGCTAGGCTACAAGGACCCAGAGCCTTCAAAAGCAAACTTACCACTGTTGCAT
GAGTGGCATTTCCGATCTGGCCTTGATCGTTATATATGGATTATTGGAATGATCTATGCCTACT
TCCATCCAAATGTTGAAAGATGGATGGAAAAGCTTGAAGAATCTGAAACTAAGGTTAGGTTGTC
AATTAAGGGAACCATCATTAGTATTTCCTTGGTG
						
					

						Genomic sequence
						
							GTGTCATTTTTGCTTGGTCTATTCCCTGTTCTCATTGCATGGATCTATTCAGAAGTCCTGGAGT
ACAGAAAATCTTCGTCTATGAAAGTGTAAGTTAGCTATATTGGTCAGTATTAACTCAGTAGTAC
AGCGATGTTTTTACGAATTTTCTAAGCCTTTGAGTAACAAATACTTACCCTGGCTCTATCTGTG
CATTTTTTTGTTTCTATAGTCACTCCGATTCCAATTTGGAGAATGGAACTGTCAAAGAAGATGA
TAAAACGGTATTGCTGGAAGGAGGCCTGTCAAAGTCACCATCTACAAAGTTTCGGATCAATTCT
ACAAAAGCAAACCTCATAAGGTGATTTGGCATAATAGTAGATGTTTGATTCATGATTACAAACG
TGGAATGCTGAGAATTAACATCTCAATGTCGTGAGCTGTAGGTTTATAACAATGGATGAATCTT
TCCTTCTGGAAAATCGTGCTGTACTGAGAGCAATGTAAGACCCTATAGAACTATTTTGCATTTA
CTGAAAATAAATATCCATCGATATTTACAAGCGCTATCTTTCTACAGGGCAGAATTTGGCATCG
TTCTGGTTTATTTCTACATTTGTGATCGGACAAACATATTTCCAGAAAGCAAGAAGGTATTGAT
GCCATCATTATTTTAATGATCGTTCTCTCAATTTTTGATTGAAAGTAATTGGTATTCTTTGCTA
GATTATCATATTAGTATAGTGCCATCCTCCCACCTTACTACTGTACTCCTTTTTTACTTCTTCT
TTTTATATCTTTCCCTCCTTTTCAGTTGTAAATTCCAACATTTTACACTAAGGAAATAGAATCT
TCATTTCTTTGCTTAGTCTTTCTCTGAATTTTGCAACTCTAATAGAGAAATTGGCTAGAATTGA
CATAATCTTGATATTCCATACTACTTACCTGTATGTTATTTGGTGTACTGTGCCTCTAGTCTTT
TGTCATACAATCTTTACCTACTCTACTGTATTCTACCTTCTCGAACGAATGAGCATAAGAGGAC
ATATGCTGTAATCTTATTTTGTTTATTAACAAATAGTTACTGATGAATTTCACTGCTCACTTGC
TTAATATCTTCTATTAAACCCCTTTTATTTTTTACATATTAAATATAATTAACAGACTTTGGAC
AGTTCAACTTTTTTGTGCTATCATATTATGACCATATTTTGATAATGATTGGTTTTCCCTCTAC
TTTGCCAGAGTTACAACCGTGATCTGTTTCTGTTTTTATACATTCTTCTCATCATAGCATCAGC
ATTAACATCACTTAAGAAGCACCATGACAAATCAGCATTCTCAGGGAAATCTATACTCTATCTT
AATCGCCATCAAACAGAGGAATGGAAAGGTTGGATGCAGGTTAGTGATTTAAATAATTATAAAA
TTTTGAATCCACTGTATTTTTTTTGTATTCTTTCTTTTGTTGTCCTGTTTATGTTACAATTTAG
TCAAAGGAACACGTGAGTGATTGGTGATCATAATAAATGTTTTCTGAAAGATCTGATGCTAATA
GATCTGAAGAGTGGGTTTGTTAGTTTTTCCTAGACAAGTTCCTGACAGTTTATCTGGATTTGGT
ATTTCTAGTGGGATCTGTCTATAGTTGCCAGAAATATATTGGCCATTCCAAAGCAGTCTGTGTG
TGTGTGTGTGTGTTGCGGGGGTGGGGGGATTCATTGATTGATATGTCTAGTGTTTCATAAGTTG
AAGGTTTTTTGGTTGAGATGATGGAAACAAGGTGGGAACAGTTTTGCATATCAGGCTGCCACTA
TATCTGTAAACTGAGTCTGAATGGCTGTGCTCAACTTACATTTCTACTAACACAGCTGTGCTTC
ATGTCATGTAGAATACAGTTTAGTTCACTGACACGCAGGATCATACACAGCTATAATTAATGCT
GCTGAAAATATTTATGTATTATTTTGCAATAGTACCGTCAGGTTATTTTCAAGTACATATGCTT
GAACATGCAGTAGTATATTTGGCATGTGTTCGGTATGAACTAAACTTTCTTTAGAACCACATAT
TAGTATATCTTACTAGACTGTTGCTAGCGAAAACATCATTATCTTGTACTGTTTTTCTGCAATC
TGCAGAGGTGCATATATCTACTCCTTAAAAACTGGAATTGGTGATGGTGTTGGTGTGCTCTATG
TAGCCTCAACTAAGAAATTTCGTGGATAAATTTATGTAGACATTTGAGTGCTGTATTTTATTTT
AGGGGCAAAATTTACTAAAATTTTGCATATGTATATGTAGTTTTTTGTATTAGAGTATAATTGT
TTTTCAAAGTCAGAACCTATGTTATATTCATTTGAGATCTGTCACAAACTCACAACACACAGGC
ATAATGGTAGTTTCCTTATAATGTCAGTCACCATTATTTTCAGTTGCTGTCTTTTGCCAACTTT
TAGGTAAGATTTGTAACTTTTCCACCTGCTGTTTACAGGTCCTGTTTTTAATGTACCACTATTT
TGCCGCCACTGAAATATACAATGCAATTCGTGTTTTCATTGCTGCCTATGTCTGGATGACTGGA
TTTGGGAACTTCTCATACTATTATATTAAGAAAGACTTTAGTCTTGCCAGATTTGCTCAGGTGC
CATTCTGATCTTTAACCCCAATCTGTTCTATATGATACTTTAGTATGTTTTCATTTCCTTGATT
TAATGCATGGTTTACACTGACAACCATATTTCTAATGCAGATGATGTGGAGACTTAATTTTTTT
GTGGCTTTCTGCTGCATTGTCCTTGACAATGATTACATGCTCTATTACATATGCCCAATGCACA
CTTTGTTTACTCTTATGGTATATGGGTCCCTTGGTCTCTTTAATAAGTATAATGAGATACCTTC
AGTGATGGCAATGAAGATTGTCAGCTGCTTCTTAGCAGTGATCTTGATATGGGAAATTCCTGGT
GTATTTGAACTGCTGTGGAGTCCATTTACATTTCTGCTAGGTTGGTTATTCTTATATTTCGATG
TGTCATTTTCCTTACCATTCCTAGATAAATCATGTTAACATGTGTTTTGTACTTTTGTGATGCA
GGCTACAAGGACCCAGAGCCTTCAAAAGCAAACTTACCACTGTTGCATGAGTGGCATTTCCGAT
CTGGCCTTGATCGTTATATATGGATTATTGGAATGATCTATGCCTACTTCCATCCAAATGTAAG
TTTTCAAGGATCACAGATGACTGTTTTTTATTTGATATCACTGTAGAGTCTTTGTCCTTCTGCC
CTTCTCCATCATTGTTTATGTAGGATGCAATTCATTATGCTATGGTTTCAGGTATTTTTCTTCT
ATCAGTAGTAGTGCTTGAAATGTAGATCTCTGTCATACAGGTTGAAAGATGGATGGAAAAGCTT
GAAGAATCTGAAACTAAGGTTAGGTTGTCAATTAAGGGAACCATCATTAGTATTTCCTTGGTG
						
					

			
		

Sequences
Splice junction sequence	CTCTGTCATACAGGTTGAAAGATGGATGGAAAAGCTTGAAGAATCTGAAACTAAGGTTAGGTTG TCAATTAAGGGAACCATCATTAGTATTTCCTTGGTGgtgtcatttttgcttggtctattccctg ttctcattgcatggatctattcagaagtcctggagtacagaaaatcttcgtctatgaaagtgta agttagct
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1122 Transcript exons: 25228174-25228262,25228385-25228513,25228599-25228655,25 228733-25228805,25229398-25229556,25230644-25230793,2523 0902-25231157,25231247-25231368,25231542-25231628 GTGTCATTTTTGCTTGGTCTATTCCCTGTTCTCATTGCATGGATCTATTCAGAAGTCCTGGAGT ACAGAAAATCTTCGTCTATGAAAGTTCACTCCGATTCCAATTTGGAGAATGGAACTGTCAAAGA AGATGATAAAACGGTATTGCTGGAAGGAGGCCTGTCAAAGTCACCATCTACAAAGTTTCGGATC AATTCTACAAAAGCAAACCTCATAAGGTTTATAACAATGGATGAATCTTTCCTTCTGGAAAATC GTGCTGTACTGAGAGCAATGGCAGAATTTGGCATCGTTCTGGTTTATTTCTACATTTGTGATCG GACAAACATATTTCCAGAAAGCAAGAAGAGTTACAACCGTGATCTGTTTCTGTTTTTATACATT CTTCTCATCATAGCATCAGCATTAACATCACTTAAGAAGCACCATGACAAATCAGCATTCTCAG GGAAATCTATACTCTATCTTAATCGCCATCAAACAGAGGAATGGAAAGGTTGGATGCAGGTCCT GTTTTTAATGTACCACTATTTTGCCGCCACTGAAATATACAATGCAATTCGTGTTTTCATTGCT GCCTATGTCTGGATGACTGGATTTGGGAACTTCTCATACTATTATATTAAGAAAGACTTTAGTC TTGCCAGATTTGCTCAGATGATGTGGAGACTTAATTTTTTTGTGGCTTTCTGCTGCATTGTCCT TGACAATGATTACATGCTCTATTACATATGCCCAATGCACACTTTGTTTACTCTTATGGTATAT GGGTCCCTTGGTCTCTTTAATAAGTATAATGAGATACCTTCAGTGATGGCAATGAAGATTGTCA GCTGCTTCTTAGCAGTGATCTTGATATGGGAAATTCCTGGTGTATTTGAACTGCTGTGGAGTCC ATTTACATTTCTGCTAGGCTACAAGGACCCAGAGCCTTCAAAAGCAAACTTACCACTGTTGCAT GAGTGGCATTTCCGATCTGGCCTTGATCGTTATATATGGATTATTGGAATGATCTATGCCTACT TCCATCCAAATGTTGAAAGATGGATGGAAAAGCTTGAAGAATCTGAAACTAAGGTTAGGTTGTC AATTAAGGGAACCATCATTAGTATTTCCTTGGTG
Genomic sequence	GTGTCATTTTTGCTTGGTCTATTCCCTGTTCTCATTGCATGGATCTATTCAGAAGTCCTGGAGT ACAGAAAATCTTCGTCTATGAAAGTGTAAGTTAGCTATATTGGTCAGTATTAACTCAGTAGTAC AGCGATGTTTTTACGAATTTTCTAAGCCTTTGAGTAACAAATACTTACCCTGGCTCTATCTGTG CATTTTTTTGTTTCTATAGTCACTCCGATTCCAATTTGGAGAATGGAACTGTCAAAGAAGATGA TAAAACGGTATTGCTGGAAGGAGGCCTGTCAAAGTCACCATCTACAAAGTTTCGGATCAATTCT ACAAAAGCAAACCTCATAAGGTGATTTGGCATAATAGTAGATGTTTGATTCATGATTACAAACG TGGAATGCTGAGAATTAACATCTCAATGTCGTGAGCTGTAGGTTTATAACAATGGATGAATCTT TCCTTCTGGAAAATCGTGCTGTACTGAGAGCAATGTAAGACCCTATAGAACTATTTTGCATTTA CTGAAAATAAATATCCATCGATATTTACAAGCGCTATCTTTCTACAGGGCAGAATTTGGCATCG TTCTGGTTTATTTCTACATTTGTGATCGGACAAACATATTTCCAGAAAGCAAGAAGGTATTGAT GCCATCATTATTTTAATGATCGTTCTCTCAATTTTTGATTGAAAGTAATTGGTATTCTTTGCTA GATTATCATATTAGTATAGTGCCATCCTCCCACCTTACTACTGTACTCCTTTTTTACTTCTTCT TTTTATATCTTTCCCTCCTTTTCAGTTGTAAATTCCAACATTTTACACTAAGGAAATAGAATCT TCATTTCTTTGCTTAGTCTTTCTCTGAATTTTGCAACTCTAATAGAGAAATTGGCTAGAATTGA CATAATCTTGATATTCCATACTACTTACCTGTATGTTATTTGGTGTACTGTGCCTCTAGTCTTT TGTCATACAATCTTTACCTACTCTACTGTATTCTACCTTCTCGAACGAATGAGCATAAGAGGAC ATATGCTGTAATCTTATTTTGTTTATTAACAAATAGTTACTGATGAATTTCACTGCTCACTTGC TTAATATCTTCTATTAAACCCCTTTTATTTTTTACATATTAAATATAATTAACAGACTTTGGAC AGTTCAACTTTTTTGTGCTATCATATTATGACCATATTTTGATAATGATTGGTTTTCCCTCTAC TTTGCCAGAGTTACAACCGTGATCTGTTTCTGTTTTTATACATTCTTCTCATCATAGCATCAGC ATTAACATCACTTAAGAAGCACCATGACAAATCAGCATTCTCAGGGAAATCTATACTCTATCTT AATCGCCATCAAACAGAGGAATGGAAAGGTTGGATGCAGGTTAGTGATTTAAATAATTATAAAA TTTTGAATCCACTGTATTTTTTTTGTATTCTTTCTTTTGTTGTCCTGTTTATGTTACAATTTAG TCAAAGGAACACGTGAGTGATTGGTGATCATAATAAATGTTTTCTGAAAGATCTGATGCTAATA GATCTGAAGAGTGGGTTTGTTAGTTTTTCCTAGACAAGTTCCTGACAGTTTATCTGGATTTGGT ATTTCTAGTGGGATCTGTCTATAGTTGCCAGAAATATATTGGCCATTCCAAAGCAGTCTGTGTG TGTGTGTGTGTGTTGCGGGGGTGGGGGGATTCATTGATTGATATGTCTAGTGTTTCATAAGTTG AAGGTTTTTTGGTTGAGATGATGGAAACAAGGTGGGAACAGTTTTGCATATCAGGCTGCCACTA TATCTGTAAACTGAGTCTGAATGGCTGTGCTCAACTTACATTTCTACTAACACAGCTGTGCTTC ATGTCATGTAGAATACAGTTTAGTTCACTGACACGCAGGATCATACACAGCTATAATTAATGCT GCTGAAAATATTTATGTATTATTTTGCAATAGTACCGTCAGGTTATTTTCAAGTACATATGCTT GAACATGCAGTAGTATATTTGGCATGTGTTCGGTATGAACTAAACTTTCTTTAGAACCACATAT TAGTATATCTTACTAGACTGTTGCTAGCGAAAACATCATTATCTTGTACTGTTTTTCTGCAATC TGCAGAGGTGCATATATCTACTCCTTAAAAACTGGAATTGGTGATGGTGTTGGTGTGCTCTATG TAGCCTCAACTAAGAAATTTCGTGGATAAATTTATGTAGACATTTGAGTGCTGTATTTTATTTT AGGGGCAAAATTTACTAAAATTTTGCATATGTATATGTAGTTTTTTGTATTAGAGTATAATTGT TTTTCAAAGTCAGAACCTATGTTATATTCATTTGAGATCTGTCACAAACTCACAACACACAGGC ATAATGGTAGTTTCCTTATAATGTCAGTCACCATTATTTTCAGTTGCTGTCTTTTGCCAACTTT TAGGTAAGATTTGTAACTTTTCCACCTGCTGTTTACAGGTCCTGTTTTTAATGTACCACTATTT TGCCGCCACTGAAATATACAATGCAATTCGTGTTTTCATTGCTGCCTATGTCTGGATGACTGGA TTTGGGAACTTCTCATACTATTATATTAAGAAAGACTTTAGTCTTGCCAGATTTGCTCAGGTGC CATTCTGATCTTTAACCCCAATCTGTTCTATATGATACTTTAGTATGTTTTCATTTCCTTGATT TAATGCATGGTTTACACTGACAACCATATTTCTAATGCAGATGATGTGGAGACTTAATTTTTTT GTGGCTTTCTGCTGCATTGTCCTTGACAATGATTACATGCTCTATTACATATGCCCAATGCACA CTTTGTTTACTCTTATGGTATATGGGTCCCTTGGTCTCTTTAATAAGTATAATGAGATACCTTC AGTGATGGCAATGAAGATTGTCAGCTGCTTCTTAGCAGTGATCTTGATATGGGAAATTCCTGGT GTATTTGAACTGCTGTGGAGTCCATTTACATTTCTGCTAGGTTGGTTATTCTTATATTTCGATG TGTCATTTTCCTTACCATTCCTAGATAAATCATGTTAACATGTGTTTTGTACTTTTGTGATGCA GGCTACAAGGACCCAGAGCCTTCAAAAGCAAACTTACCACTGTTGCATGAGTGGCATTTCCGAT CTGGCCTTGATCGTTATATATGGATTATTGGAATGATCTATGCCTACTTCCATCCAAATGTAAG TTTTCAAGGATCACAGATGACTGTTTTTTATTTGATATCACTGTAGAGTCTTTGTCCTTCTGCC CTTCTCCATCATTGTTTATGTAGGATGCAATTCATTATGCTATGGTTTCAGGTATTTTTCTTCT ATCAGTAGTAGTGCTTGAAATGTAGATCTCTGTCATACAGGTTGAAAGATGGATGGAAAAGCTT GAAGAATCTGAAACTAAGGTTAGGTTGTCAATTAAGGGAACCATCATTAGTATTTCCTTGGTG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.249873582

Conservation Information
Conserved circRNAs	NA
PMCS	0.249873582

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							25228256-25231625(+)
25231350-25228255(+)
25228210-25231355(-)
						
					

						Potential amino acid sequence
						
							MKVHSDSNLENGTVKEDDKTVLLEGGLSKSPSTKFRINSTKANLIRFITMDESFLLENRAVLRA
MAEFGIVLVYFYICDRTNIFPESKKSYNRDLFLFLYILLIIASALTSLKKHHDKSAFSGKSILY
LNRHQTEEWKGWMQVLFLMYHYFAATEIYNAIRVFIAAYVWMTGFGNFSYYYIKKDFSLARFAQ
MMWRLNFFVAFCCIVLDNDYMLYYICPMHTLFTLMVYGSLGLFNKYNEIPSVMAMKIVSCFLAV
ILIWEIPGVFELLWSPFTFLLGYKDPEPSKANLPLLHEWHFRSGLDRYIWIIGMIYAYFHPNVE
RWMEKLEESETKVRLSIKGTIISISLVVSFLLGLFPVLIAWIYSEVLEYRKSSSMKVHSDSNLE
NGTVKEDDKTVLLEGGLSKSPSTKFRINSTKANLIRFITMDESFLLENRAVLRAMAEFGIVLVY
FYICDRTNIFPESKKSYNRDLFLFLYILLIIASALTSLKKHHDKSAFSGKSILYLNRHQTEEWK
GWMQVLFLMYHYFAATEIYNAIRVFIAAYVWMTGFGNFSYYYIKKDFSLARFAQMMWRLNFFVA
FCCIVLDNDYMLYYICPMHTLFTLMVYGSLGLFNKYNEIPSVMAMKIVSCFLAVILIWEIPGVF
ELLWSPFTFLLGYKDPEPSKANLPLLHEWHFRSGLDRYIWIIGMIYAYFHPNVERWMEKLEESE
TKVRLSIKGTIISISLVVSFLLGLFPVLIAWIYSEVLEYRKSSSMKVHSDSNLENGTVKEDDKT
VLLEGGLSKSPSTKFRINSTKANLIRFITMDESFLLENRAVLRAMAEFGIVLVYFYICDRTNIF
PESKKSYNRDLFLFLYILLIIASALTSLKKHHDKSAFSGKSILYLNRHQTEEWKGWMQVLFLMY
HYFAATEIYNAIRVFIAAYVWMTGFGNFSYYYIKKDFSLARFAQMMWRLNFFVAFCCIVLDNDY
MLYYICPMHTLFTLMVYGSLGLFNKYNEIPSVMAMKIVSCFLAVILIWEIPGVFELLWSPFTFL
LGYKDPEPSKANLPLLHEWHFRSGLDRYIWIIGMIYAYFHPNVERWMEKLEESETKVRLSIKGT
IISISLVVSFLLGLFPVLIAWIYSEVLEYRKSSSMKVHSDSNLENGTVKEDDKTVLLEGGLSKS
PSTKFRINSTKANLIRFITMDESFLLENRAVLRAMAEFGIVLVYFYICDRTNIFPESKKSYNRD
LFLFLYILLIIASALTSLKKHHDKSAFSGKSILYLNRHQTEEWKGWMQVLFLMYHYFAATEIYN
AIRVFIAAYVWMTGFGNFSYYYIKKDFSLARFAQMMWRLNFFVAFCCIVLDNDYMLYYICPMHT
LFTLMVYGSLGLFNKYNEIPSVMAMKIVSCFLAVILIWEIPGVFELLWSPFTFLLGYKDPEPSK
ANLPLLHEWHFRSGLDRYIWIIGMIYAYFHPNVERWMEKLEESETKVRLSIKGTIISISLV(+)
MPTSIQMLKDGWKSLKNLKLRLGCQLREPSLVFPWWCHFCLVYSLFSLHGSIQKSWSTENLRL*
(+)
MRTGNRPSKNDTTKEILMMVPLIDNLTLVSDSSSFSIHLSTFGWK*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	25228256-25231625(+) 25231350-25228255(+) 25228210-25231355(-)
Potential amino acid sequence	MKVHSDSNLENGTVKEDDKTVLLEGGLSKSPSTKFRINSTKANLIRFITMDESFLLENRAVLRA MAEFGIVLVYFYICDRTNIFPESKKSYNRDLFLFLYILLIIASALTSLKKHHDKSAFSGKSILY LNRHQTEEWKGWMQVLFLMYHYFAATEIYNAIRVFIAAYVWMTGFGNFSYYYIKKDFSLARFAQ MMWRLNFFVAFCCIVLDNDYMLYYICPMHTLFTLMVYGSLGLFNKYNEIPSVMAMKIVSCFLAV ILIWEIPGVFELLWSPFTFLLGYKDPEPSKANLPLLHEWHFRSGLDRYIWIIGMIYAYFHPNVE RWMEKLEESETKVRLSIKGTIISISLVVSFLLGLFPVLIAWIYSEVLEYRKSSSMKVHSDSNLE NGTVKEDDKTVLLEGGLSKSPSTKFRINSTKANLIRFITMDESFLLENRAVLRAMAEFGIVLVY FYICDRTNIFPESKKSYNRDLFLFLYILLIIASALTSLKKHHDKSAFSGKSILYLNRHQTEEWK GWMQVLFLMYHYFAATEIYNAIRVFIAAYVWMTGFGNFSYYYIKKDFSLARFAQMMWRLNFFVA FCCIVLDNDYMLYYICPMHTLFTLMVYGSLGLFNKYNEIPSVMAMKIVSCFLAVILIWEIPGVF ELLWSPFTFLLGYKDPEPSKANLPLLHEWHFRSGLDRYIWIIGMIYAYFHPNVERWMEKLEESE TKVRLSIKGTIISISLVVSFLLGLFPVLIAWIYSEVLEYRKSSSMKVHSDSNLENGTVKEDDKT VLLEGGLSKSPSTKFRINSTKANLIRFITMDESFLLENRAVLRAMAEFGIVLVYFYICDRTNIF PESKKSYNRDLFLFLYILLIIASALTSLKKHHDKSAFSGKSILYLNRHQTEEWKGWMQVLFLMY HYFAATEIYNAIRVFIAAYVWMTGFGNFSYYYIKKDFSLARFAQMMWRLNFFVAFCCIVLDNDY MLYYICPMHTLFTLMVYGSLGLFNKYNEIPSVMAMKIVSCFLAVILIWEIPGVFELLWSPFTFL LGYKDPEPSKANLPLLHEWHFRSGLDRYIWIIGMIYAYFHPNVERWMEKLEESETKVRLSIKGT IISISLVVSFLLGLFPVLIAWIYSEVLEYRKSSSMKVHSDSNLENGTVKEDDKTVLLEGGLSKS PSTKFRINSTKANLIRFITMDESFLLENRAVLRAMAEFGIVLVYFYICDRTNIFPESKKSYNRD LFLFLYILLIIASALTSLKKHHDKSAFSGKSILYLNRHQTEEWKGWMQVLFLMYHYFAATEIYN AIRVFIAAYVWMTGFGNFSYYYIKKDFSLARFAQMMWRLNFFVAFCCIVLDNDYMLYYICPMHT LFTLMVYGSLGLFNKYNEIPSVMAMKIVSCFLAVILIWEIPGVFELLWSPFTFLLGYKDPEPSK ANLPLLHEWHFRSGLDRYIWIIGMIYAYFHPNVERWMEKLEESETKVRLSIKGTIISISLV(+) MPTSIQMLKDGWKSLKNLKLRLGCQLREPSLVFPWWCHFCLVYSLFSLHGSIQKSWSTENLRL* (+) MRTGNRPSKNDTTKEILMMVPLIDNLTLVSDSSSFSIHLSTFGWK*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os01g0631100_circ_g.4

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