Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | orai.009G329800_circ_g.1 |
| ID in PlantcircBase | gra_circ_001010 |
| Alias | Chr09:33830937|33835834 |
| Organism | Gossypium raimondii |
| Position | chrChr09: 33830937-33835834 JBrowse» |
| Reference genome | Graimondii_221 |
| Type | ue-circRNA |
| Identification method | CIRI |
| Parent gene | Gorai.009G329800 |
| Parent gene annotation | NA |
| Parent gene strand | - |
| Alternative splicing | NA |
| Support reads | 2 |
| Tissues | leaf |
| Exon boundary | No-Yes |
| Splicing signals | CT-AC |
| Number of exons covered | Gorai.009G329800.5:10 Gorai.009G329800.3:10 Gorai.009G329800.6:9 Gorai.009G329800.1:10 Gorai.009G329800.2:10 Gorai.009G329800.4:8 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.135518006 |
| Functional Information | |
|---|---|
| Coding potential | Y |
| Potential coding position |
33834158-33830995(+) |
| Potential amino acid sequence |
MDAFFSSFIFLISRFLLSRRDSVSLSFSAIFERSSVSSSTAFSLSLSDILNALISACASPNSLS LSMQVLAAAPIRILLSLSAAC*(+) |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Zhao et al., 2017b |