Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | AT1G10960_circ_g.3 |
ID in PlantcircBase | ath_circ_002049 |
Alias | Ath_circ_FC0301 |
Organism | Arabidpsis thaliana |
Position | chr1: 3664483-3664628 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | circRNA_finder, find_circ, circseq_cup, CIRI-full |
Parent gene | AT1G10960 |
Parent gene annotation |
Ferredoxin-1, chloroplastic |
Parent gene strand | + |
Alternative splicing | AT1G10960_circ_g.1 AT1G10960_circ_g.2 AT1G10960_circ_g.4 AT1G10960_circ_g.5 |
Support reads | 4 |
Tissues | leaf |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | AT1G10960.1:1 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.183217925 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Chu et al., 2017;Chen et al., 2017a |