Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d036986_circ_g.1 |
ID in PlantcircBase | zma_circ_002268 |
Alias | circ1968 |
Organism | Zea mays |
Position | chr6: 108329535-108330183 JBrowse» |
Reference genome | AGPv4.38 |
Type | ei-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d036986 |
Parent gene annotation |
ABC transporter G family member 29 |
Parent gene strand | + |
Alternative splicing | Zm00001d036986_circ_g.2 |
Support reads | 2 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d036986_T003:2 Zm00001d036986_T005:2 Zm00001d036986_T010:1 Zm00001d036986_T001:2 Zm00001d036986_T002:2 Zm00001d036986_T007:2 Zm00001d036986_T009:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.22976442 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | zma-miR394b-3p |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |