Plant Circular RNA Database

Detail information of Zm00001d048540_circ_g.1

			
						 General Information
					
						CircRNA Name
						Zm00001d048540_circ_g.1
					
						ID in PlantcircBase
						zma_circ_010118
					
						Alias
						Zm09circ00081
					
						Organism
						
							Zea mays						
					
						Position
						
							chr9: 158119613-158121888  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Zm00001d048540						
					
						Parent gene annotation
						
							Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-re
lated
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Zm00001d048540_circ_g.2 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d048540_T005:4
Zm00001d048540_T007:4
Zm00001d048540_T008:5
Zm00001d048540_T002:4
Zm00001d048540_T004:4
Zm00001d048540_T009:4

General Information
CircRNA Name	Zm00001d048540_circ_g.1
ID in PlantcircBase	zma_circ_010118
Alias	Zm09circ00081
Organism	Zea mays
Position	chr9: 158119613-158121888 JBrowse»
Reference genome	AGPv4.38
Type	ue-circRNA
Identification method	CIRI2
Parent gene	Zm00001d048540
Parent gene annotation	Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-re lated
Parent gene strand	+
Alternative splicing	Zm00001d048540_circ_g.2
Support reads	NA
Tissues	leaf, endosperm
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d048540_T005:4 Zm00001d048540_T007:4 Zm00001d048540_T008:5 Zm00001d048540_T002:4 Zm00001d048540_T004:4 Zm00001d048540_T009:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TTCAGACCAAGGGATTTTCTGGGAGGACAAGCATCCGAGGTTATGTTACATAAAGGAATTGCTA
GAGCTGTCAGAATTGTGTGCAAACCAGAACTTAGAGaacatggaggaacccagttccagcaaac
caacagtcaaaagacttatggaggacgagctacgaaagctaaaacagctgaagcttccaaatga
tgaggttg

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 2025
Transcript exons: 158119613-158121158,158121239-158121351,158121430-158121
643,158121737-158121888
AACATGGAGGAACCCAGTTCCAGCAAACCAACAGTCAAAAGACTTATGGAGGACGAGCTACGAA
AGCTAAAACAGCTGAAGCTTCCAAATGATGAGGTTGAGAGAATATTAGCTGACCTGGGACATGG
TGCCTGCCTGGACAAAAGTTCAGCCCAAAACAGCAAAGCGAAGAAGGGAGACCAAAATCACATC
AGAGGTATCACCACCACGGCTGCTCCATCTGGATCTTTGGATCCCACTGCTTCCAACTGCATAA
AAGAAGCAGAAGAAAATGAGCTTGAATTTGCCTTGGCAGATTTCTTAGGACGGATCCATAGAAA
TTGCAACAATAATGGGGAGTTATGTACGGAGATGAAAGCCCTAATCCAAACAAAGATTGCAGAG
CTAGATAATCCTCCGTGCACATTTGCTTATGAGCAGCAAACTTCACGGGGTGACGAATATGATA
CTGCTGGTGGCAAACATCGATGTAGCAGTAGTAAAACTCAGCCCAAAAAATTCAGAGATGCGCT
GGAGATGCTAAGCTCAGACACCGAACTTTTCTTTCAGAAGTCAAATTCACGTATTTTGGAGAGC
GCCCAAAGAAACCAAAACAGACTGATAGGGAACAATCTAGAGCCCACAAAAATAGCAGATAATA
CCGACTCCAACAAAGATCCAAAGAGTCTGAACCAGCATGAGTTGGCCACCAGGAGATATGGTAA
AGAGAGCAGGAATATCTTTTTCTGGAAGAAGGAAAGATCCTCACCAAGGCAGACTGCACAAGGA
ACCAGTAGTTCTCAGCCAGTTAACAAAATAGTTATACTGAAGCCAAATCCAAGGAGAGAGATCG
GCCATGCTGTGGCTGTTAGTTCAACCCAAGCTCCAAAACTAGGTGCAACCGAGAGCTCAAAATT
TTCAATTAAGGAGGTCAGAAGGAGATTCAGAATCGTGACTAGTGAAGCTACAAAAGGAATACCC
TCAGTGTCTGAAGATAACCTCCAAAAAGGTCAGCATTGGCTCAACAGTTCAGCTTTCACAATAA
TAAAAGATACCAGACAGCTCGCTGAACAGACCTCAGAAGGGAAATTCTCATCTTCAGTTATGAA
GGATTTTAGATCATCAAACAGCGGTAGGCAAAAGAAAAGAAAAAATGATGGGCCAACCGAAAAA
AACAGTAGCATAATTACGTCATCCAAGGATGAATCTGTCTTCTATGACGAGGCCAGGAAACATC
TAACAGAGATTCTCAAGGACAAAAGACAAACAACCAAGCAGCACCCGACACTTGAGATCTCAAG
GTCCTTGGTGAGGATGCTTTCCTTCCCTCAGTCCAGCACATCATCACCTAGGAGTAGCCCTAGG
GCAAAAGACTGCATTTACCTCTCACCTGAAGAGGCAAGCATTCGTGCCATATACAAGTCAAATA
AAGATCTTTTAGAAGAAGAAAGCCAGTCTGGAGAATTTCCAGAGAATGTTGTGTGTGATCCTAG
TGAAGCACTGCATGAGCAGGCTGTTCAGGAAAGGTGGTGCGTCAAAGAAGAAAGTCAAGAAACA
ACACAAGAAGGTGCAGAACTTGACACTCTGCGCACTAAAGAAATTGACAAGCTGGATTGCATGG
GAAAAAATAGCAATGCATGGGGCACCCCAGCAAAGCAATGCACATATAAACCATCACAAGATAT
GGTGGGAGAAGCAGAGCCAGGACAAAGGCATGTCAGGACGTTTCCAAGCTCCCCTGAGAACGAC
TTTGAAAAACTGGAATGCCAAGAGCCCACGACTCCCCGACCGAGTGCACAGATCGAACAGATAT
CACAATTTTCTCCTGATGGAAACCACGAAAAGCAAGAACAGCCGAGCCCTCAATCTGTTCTTGA
TGTGTTCTTCCTCGACGGTGAGTTGCACAAAGATATCTTGAGGACACGCTACAACACCACAGGG
GATGGTTCAGACCAAGGGATTTTCTGGGAGGACAAGCATCCGAGGTTATGTTACATAAAGGAAT
TGCTAGAGCTGTCAGAATTGTGTGCAAACCAGAACTTAGAG
						
					

						Genomic sequence
						
							AACATGGAGGAACCCAGTTCCAGCAAACCAACAGTCAAAAGACTTATGGAGGACGAGCTACGAA
AGCTAAAACAGCTGAAGCTTCCAAATGATGAGGTTGAGAGAATATTAGCTGACCTGGGACATGG
TGCCTGCCTGGACAAAAGTTCAGCCCAAAACAGCAAAGCGAAGAAGGGAGACCAAAATCACATC
AGAGGTATCACCACCACGGCTGCTCCATCTGGATCTTTGGATCCCACTGCTTCCAACTGCATAA
AAGAAGCAGAAGAAAATGAGCTTGAATTTGCCTTGGCAGATTTCTTAGGACGGATCCATAGAAA
TTGCAACAATAATGGGGAGTTATGTACGGAGATGAAAGCCCTAATCCAAACAAAGATTGCAGAG
CTAGATAATCCTCCGTGCACATTTGCTTATGAGCAGCAAACTTCACGGGGTGACGAATATGATA
CTGCTGGTGGCAAACATCGATGTAGCAGTAGTAAAACTCAGCCCAAAAAATTCAGAGATGCGCT
GGAGATGCTAAGCTCAGACACCGAACTTTTCTTTCAGAAGTCAAATTCACGTATTTTGGAGAGC
GCCCAAAGAAACCAAAACAGACTGATAGGGAACAATCTAGAGCCCACAAAAATAGCAGATAATA
CCGACTCCAACAAAGATCCAAAGAGTCTGAACCAGCATGAGTTGGCCACCAGGAGATATGGTAA
AGAGAGCAGGAATATCTTTTTCTGGAAGAAGGAAAGATCCTCACCAAGGCAGACTGCACAAGGA
ACCAGTAGTTCTCAGCCAGTTAACAAAATAGTTATACTGAAGCCAAATCCAAGGAGAGAGATCG
GCCATGCTGTGGCTGTTAGTTCAACCCAAGCTCCAAAACTAGGTGCAACCGAGAGCTCAAAATT
TTCAATTAAGGAGGTCAGAAGGAGATTCAGAATCGTGACTAGTGAAGCTACAAAAGGAATACCC
TCAGTGTCTGAAGATAACCTCCAAAAAGGTCAGCATTGGCTCAACAGTTCAGCTTTCACAATAA
TAAAAGATACCAGACAGCTCGCTGAACAGACCTCAGAAGGGAAATTCTCATCTTCAGTTATGAA
GGATTTTAGATCATCAAACAGCGGTAGGCAAAAGAAAAGAAAAAATGATGGGCCAACCGAAAAA
AACAGTAGCATAATTACGTCATCCAAGGATGAATCTGTCTTCTATGACGAGGCCAGGAAACATC
TAACAGAGATTCTCAAGGACAAAAGACAAACAACCAAGCAGCACCCGACACTTGAGATCTCAAG
GTCCTTGGTGAGGATGCTTTCCTTCCCTCAGTCCAGCACATCATCACCTAGGAGTAGCCCTAGG
GCAAAAGACTGCATTTACCTCTCACCTGAAGAGGCAAGCATTCGTGCCATATACAAGTCAAATA
AAGATCTTTTAGAAGAAGAAAGCCAGTCTGGAGAATTTCCAGAGAATGTTGTGTGTGATCCTAG
TGAAGCACTGCATGAGCAGGCTGTTCAGGAAAGGTGGTGCGTCAAAGAAGAAAGTCAAGAAACA
ACACAAGAAGGTAAGTTAAAACTTCCATAGTCAGCAAAATGGTTCAACAGAACACATGGTTTAT
ATATGTATATGATAAAATATTTGCAGGTGCAGAACTTGACACTCTGCGCACTAAAGAAATTGAC
AAGCTGGATTGCATGGGAAAAAATAGCAATGCATGGGGCACCCCAGCAAAGCAATGCACATATA
AACCATCACAAGTATGTTTCAGCTAGTTGTTCCGTCTTACTTTCATAGCTTCTGTTATTTTGAT
GGTTTTGTGCACTTTTGCATTAAAGGATATGGTGGGAGAAGCAGAGCCAGGACAAAGGCATGTC
AGGACGTTTCCAAGCTCCCCTGAGAACGACTTTGAAAAACTGGAATGCCAAGAGCCCACGACTC
CCCGACCGAGTGCACAGATCGAACAGATATCACAATTTTCTCCTGATGGAAACCACGAAAAGCA
AGAACAGCCGAGCCCTCAATCTGTTCTTGATGTGTTCTTCCTCGACGGTACTGACACTGAAAAC
ATGATAGAATGTAAACTCATCAATTCACTCCAAGTCAAACTTAAATGATTTATTTTGGTGCTCC
AATTGTCTACAGGTGAGTTGCACAAAGATATCTTGAGGACACGCTACAACACCACAGGGGATGG
TTCAGACCAAGGGATTTTCTGGGAGGACAAGCATCCGAGGTTATGTTACATAAAGGAATTGCTA
GAGCTGTCAGAATTGTGTGCAAACCAGAACTTAGAG
						
					

			
		

Sequences
Splice junction sequence	TTCAGACCAAGGGATTTTCTGGGAGGACAAGCATCCGAGGTTATGTTACATAAAGGAATTGCTA GAGCTGTCAGAATTGTGTGCAAACCAGAACTTAGAGaacatggaggaacccagttccagcaaac caacagtcaaaagacttatggaggacgagctacgaaagctaaaacagctgaagcttccaaatga tgaggttg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 2025 Transcript exons: 158119613-158121158,158121239-158121351,158121430-158121 643,158121737-158121888 AACATGGAGGAACCCAGTTCCAGCAAACCAACAGTCAAAAGACTTATGGAGGACGAGCTACGAA AGCTAAAACAGCTGAAGCTTCCAAATGATGAGGTTGAGAGAATATTAGCTGACCTGGGACATGG TGCCTGCCTGGACAAAAGTTCAGCCCAAAACAGCAAAGCGAAGAAGGGAGACCAAAATCACATC AGAGGTATCACCACCACGGCTGCTCCATCTGGATCTTTGGATCCCACTGCTTCCAACTGCATAA AAGAAGCAGAAGAAAATGAGCTTGAATTTGCCTTGGCAGATTTCTTAGGACGGATCCATAGAAA TTGCAACAATAATGGGGAGTTATGTACGGAGATGAAAGCCCTAATCCAAACAAAGATTGCAGAG CTAGATAATCCTCCGTGCACATTTGCTTATGAGCAGCAAACTTCACGGGGTGACGAATATGATA CTGCTGGTGGCAAACATCGATGTAGCAGTAGTAAAACTCAGCCCAAAAAATTCAGAGATGCGCT GGAGATGCTAAGCTCAGACACCGAACTTTTCTTTCAGAAGTCAAATTCACGTATTTTGGAGAGC GCCCAAAGAAACCAAAACAGACTGATAGGGAACAATCTAGAGCCCACAAAAATAGCAGATAATA CCGACTCCAACAAAGATCCAAAGAGTCTGAACCAGCATGAGTTGGCCACCAGGAGATATGGTAA AGAGAGCAGGAATATCTTTTTCTGGAAGAAGGAAAGATCCTCACCAAGGCAGACTGCACAAGGA ACCAGTAGTTCTCAGCCAGTTAACAAAATAGTTATACTGAAGCCAAATCCAAGGAGAGAGATCG GCCATGCTGTGGCTGTTAGTTCAACCCAAGCTCCAAAACTAGGTGCAACCGAGAGCTCAAAATT TTCAATTAAGGAGGTCAGAAGGAGATTCAGAATCGTGACTAGTGAAGCTACAAAAGGAATACCC TCAGTGTCTGAAGATAACCTCCAAAAAGGTCAGCATTGGCTCAACAGTTCAGCTTTCACAATAA TAAAAGATACCAGACAGCTCGCTGAACAGACCTCAGAAGGGAAATTCTCATCTTCAGTTATGAA GGATTTTAGATCATCAAACAGCGGTAGGCAAAAGAAAAGAAAAAATGATGGGCCAACCGAAAAA AACAGTAGCATAATTACGTCATCCAAGGATGAATCTGTCTTCTATGACGAGGCCAGGAAACATC TAACAGAGATTCTCAAGGACAAAAGACAAACAACCAAGCAGCACCCGACACTTGAGATCTCAAG GTCCTTGGTGAGGATGCTTTCCTTCCCTCAGTCCAGCACATCATCACCTAGGAGTAGCCCTAGG GCAAAAGACTGCATTTACCTCTCACCTGAAGAGGCAAGCATTCGTGCCATATACAAGTCAAATA AAGATCTTTTAGAAGAAGAAAGCCAGTCTGGAGAATTTCCAGAGAATGTTGTGTGTGATCCTAG TGAAGCACTGCATGAGCAGGCTGTTCAGGAAAGGTGGTGCGTCAAAGAAGAAAGTCAAGAAACA ACACAAGAAGGTGCAGAACTTGACACTCTGCGCACTAAAGAAATTGACAAGCTGGATTGCATGG GAAAAAATAGCAATGCATGGGGCACCCCAGCAAAGCAATGCACATATAAACCATCACAAGATAT GGTGGGAGAAGCAGAGCCAGGACAAAGGCATGTCAGGACGTTTCCAAGCTCCCCTGAGAACGAC TTTGAAAAACTGGAATGCCAAGAGCCCACGACTCCCCGACCGAGTGCACAGATCGAACAGATAT CACAATTTTCTCCTGATGGAAACCACGAAAAGCAAGAACAGCCGAGCCCTCAATCTGTTCTTGA TGTGTTCTTCCTCGACGGTGAGTTGCACAAAGATATCTTGAGGACACGCTACAACACCACAGGG GATGGTTCAGACCAAGGGATTTTCTGGGAGGACAAGCATCCGAGGTTATGTTACATAAAGGAAT TGCTAGAGCTGTCAGAATTGTGTGCAAACCAGAACTTAGAG
Genomic sequence	AACATGGAGGAACCCAGTTCCAGCAAACCAACAGTCAAAAGACTTATGGAGGACGAGCTACGAA AGCTAAAACAGCTGAAGCTTCCAAATGATGAGGTTGAGAGAATATTAGCTGACCTGGGACATGG TGCCTGCCTGGACAAAAGTTCAGCCCAAAACAGCAAAGCGAAGAAGGGAGACCAAAATCACATC AGAGGTATCACCACCACGGCTGCTCCATCTGGATCTTTGGATCCCACTGCTTCCAACTGCATAA AAGAAGCAGAAGAAAATGAGCTTGAATTTGCCTTGGCAGATTTCTTAGGACGGATCCATAGAAA TTGCAACAATAATGGGGAGTTATGTACGGAGATGAAAGCCCTAATCCAAACAAAGATTGCAGAG CTAGATAATCCTCCGTGCACATTTGCTTATGAGCAGCAAACTTCACGGGGTGACGAATATGATA CTGCTGGTGGCAAACATCGATGTAGCAGTAGTAAAACTCAGCCCAAAAAATTCAGAGATGCGCT GGAGATGCTAAGCTCAGACACCGAACTTTTCTTTCAGAAGTCAAATTCACGTATTTTGGAGAGC GCCCAAAGAAACCAAAACAGACTGATAGGGAACAATCTAGAGCCCACAAAAATAGCAGATAATA CCGACTCCAACAAAGATCCAAAGAGTCTGAACCAGCATGAGTTGGCCACCAGGAGATATGGTAA AGAGAGCAGGAATATCTTTTTCTGGAAGAAGGAAAGATCCTCACCAAGGCAGACTGCACAAGGA ACCAGTAGTTCTCAGCCAGTTAACAAAATAGTTATACTGAAGCCAAATCCAAGGAGAGAGATCG GCCATGCTGTGGCTGTTAGTTCAACCCAAGCTCCAAAACTAGGTGCAACCGAGAGCTCAAAATT TTCAATTAAGGAGGTCAGAAGGAGATTCAGAATCGTGACTAGTGAAGCTACAAAAGGAATACCC TCAGTGTCTGAAGATAACCTCCAAAAAGGTCAGCATTGGCTCAACAGTTCAGCTTTCACAATAA TAAAAGATACCAGACAGCTCGCTGAACAGACCTCAGAAGGGAAATTCTCATCTTCAGTTATGAA GGATTTTAGATCATCAAACAGCGGTAGGCAAAAGAAAAGAAAAAATGATGGGCCAACCGAAAAA AACAGTAGCATAATTACGTCATCCAAGGATGAATCTGTCTTCTATGACGAGGCCAGGAAACATC TAACAGAGATTCTCAAGGACAAAAGACAAACAACCAAGCAGCACCCGACACTTGAGATCTCAAG GTCCTTGGTGAGGATGCTTTCCTTCCCTCAGTCCAGCACATCATCACCTAGGAGTAGCCCTAGG GCAAAAGACTGCATTTACCTCTCACCTGAAGAGGCAAGCATTCGTGCCATATACAAGTCAAATA AAGATCTTTTAGAAGAAGAAAGCCAGTCTGGAGAATTTCCAGAGAATGTTGTGTGTGATCCTAG TGAAGCACTGCATGAGCAGGCTGTTCAGGAAAGGTGGTGCGTCAAAGAAGAAAGTCAAGAAACA ACACAAGAAGGTAAGTTAAAACTTCCATAGTCAGCAAAATGGTTCAACAGAACACATGGTTTAT ATATGTATATGATAAAATATTTGCAGGTGCAGAACTTGACACTCTGCGCACTAAAGAAATTGAC AAGCTGGATTGCATGGGAAAAAATAGCAATGCATGGGGCACCCCAGCAAAGCAATGCACATATA AACCATCACAAGTATGTTTCAGCTAGTTGTTCCGTCTTACTTTCATAGCTTCTGTTATTTTGAT GGTTTTGTGCACTTTTGCATTAAAGGATATGGTGGGAGAAGCAGAGCCAGGACAAAGGCATGTC AGGACGTTTCCAAGCTCCCCTGAGAACGACTTTGAAAAACTGGAATGCCAAGAGCCCACGACTC CCCGACCGAGTGCACAGATCGAACAGATATCACAATTTTCTCCTGATGGAAACCACGAAAAGCA AGAACAGCCGAGCCCTCAATCTGTTCTTGATGTGTTCTTCCTCGACGGTACTGACACTGAAAAC ATGATAGAATGTAAACTCATCAATTCACTCCAAGTCAAACTTAAATGATTTATTTTGGTGCTCC AATTGTCTACAGGTGAGTTGCACAAAGATATCTTGAGGACACGCTACAACACCACAGGGGATGG TTCAGACCAAGGGATTTTCTGGGAGGACAAGCATCCGAGGTTATGTTACATAAAGGAATTGCTA GAGCTGTCAGAATTGTGTGCAAACCAGAACTTAGAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.136005807

Conservation Information
Conserved circRNAs	NA
PMCS	0.136005807

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							158119617-158121885(+)
158121832-158119701(+)
						
					

						Potential amino acid sequence
						
							MEEPSSSKPTVKRLMEDELRKLKQLKLPNDEVERILADLGHGACLDKSSAQNSKAKKGDQNHIR
GITTTAAPSGSLDPTASNCIKEAEENELEFALADFLGRIHRNCNNNGELCTEMKALIQTKIAEL
DNPPCTFAYEQQTSRGDEYDTAGGKHRCSSSKTQPKKFRDALEMLSSDTELFFQKSNSRILESA
QRNQNRLIGNNLEPTKIADNTDSNKDPKSLNQHELATRRYGKESRNIFFWKKERSSPRQTAQGT
SSSQPVNKIVILKPNPRREIGHAVAVSSTQAPKLGATESSKFSIKEVRRRFRIVTSEATKGIPS
VSEDNLQKGQHWLNSSAFTIIKDTRQLAEQTSEGKFSSSVMKDFRSSNSGRQKKRKNDGPTEKN
SSIITSSKDESVFYDEARKHLTEILKDKRQTTKQHPTLEISRSLVRMLSFPQSSTSSPRSSPRA
KDCIYLSPEEASIRAIYKSNKDLLEEESQSGEFPENVVCDPSEALHEQAVQERWCVKEESQETT
QEGAELDTLRTKEIDKLDCMGKNSNAWGTPAKQCTYKPSQDMVGEAEPGQRHVRTFPSSPENDF
EKLECQEPTTPRPSAQIEQISQFSPDGNHEKQEQPSPQSVLDVFFLDGELHKDILRTRYNTTGD
GSDQGIFWEDKHPRLCYIKELLELSELCANQNLENMEEPSSSKPTVKRLMEDELRKLKQLKLPN
DEVERILADLGHGACLDKSSAQNSKAKKGDQNHIRGITTTAAPSGSLDPTASNCIKEAEENELE
FALADFLGRIHRNCNNNGELCTEMKALIQTKIAELDNPPCTFAYEQQTSRGDEYDTAGGKHRCS
SSKTQPKKFRDALEMLSSDTELFFQKSNSRILESAQRNQNRLIGNNLEPTKIADNTDSNKDPKS
LNQHELATRRYGKESRNIFFWKKERSSPRQTAQGTSSSQPVNKIVILKPNPRREIGHAVAVSST
QAPKLGATESSKFSIKEVRRRFRIVTSEATKGIPSVSEDNLQKGQHWLNSSAFTIIKDTRQLAE
QTSEGKFSSSVMKDFRSSNSGRQKKRKNDGPTEKNSSIITSSKDESVFYDEARKHLTEILKDKR
QTTKQHPTLEISRSLVRMLSFPQSSTSSPRSSPRAKDCIYLSPEEASIRAIYKSNKDLLEEESQ
SGEFPENVVCDPSEALHEQAVQERWCVKEESQETTQEGAELDTLRTKEIDKLDCMGKNSNAWGT
PAKQCTYKPSQDMVGEAEPGQRHVRTFPSSPENDFEKLECQEPTTPRPSAQIEQISQFSPDGNH
EKQEQPSPQSVLDVFFLDGELHKDILRTRYNTTGDGSDQGIFWEDKHPRLCYIKELLELSELCA
NQNLENMEEPSSSKPTVKRLMEDELRKLKQLKLPNDEVERILADLGHGACLDKSSAQNSKAKKG
DQNHIRGITTTAAPSGSLDPTASNCIKEAEENELEFALADFLGRIHRNCNNNGELCTEMKALIQ
TKIAELDNPPCTFAYEQQTSRGDEYDTAGGKHRCSSSKTQPKKFRDALEMLSSDTELFFQKSNS
RILESAQRNQNRLIGNNLEPTKIADNTDSNKDPKSLNQHELATRRYGKESRNIFFWKKERSSPR
QTAQGTSSSQPVNKIVILKPNPRREIGHAVAVSSTQAPKLGATESSKFSIKEVRRRFRIVTSEA
TKGIPSVSEDNLQKGQHWLNSSAFTIIKDTRQLAEQTSEGKFSSSVMKDFRSSNSGRQKKRKND
GPTEKNSSIITSSKDESVFYDEARKHLTEILKDKRQTTKQHPTLEISRSLVRMLSFPQSSTSSP
RSSPRAKDCIYLSPEEASIRAIYKSNKDLLEEESQSGEFPENVVCDPSEALHEQAVQERWCVKE
ESQETTQEGAELDTLRTKEIDKLDCMGKNSNAWGTPAKQCTYKPSQDMVGEAEPGQRHVRTFPS
SPENDFEKLECQEPTTPRPSAQIEQISQFSPDGNHEKQEQPSPQSVLDVFFLDGELHKDILRTR
YNTTGDGSDQGIFWEDKHPRLCYIKELLELSELCANQNLENMEEPSSSKPTVKRLMEDELRKLK
QLKLPNDEVERILADLGHGACLDKSSAQNSKAKKGDQNHIRGITTTAAPSGSLDPTASNCIKEA
EENELEFALADFLGRIHRNCNNNGELCTEMKALIQTKIAELDNPPCTFAYEQQTSRGDEYDTAG
GKHRCSSSKTQPKKFRDALEMLSSDTELFFQKSNSRILESAQRNQNRLIGNNLEPTKIADNTDS
NKDPKSLNQHELATRRYGKESRNIFFWKKERSSPRQTAQGTSSSQPVNKIVILKPNPRREIGHA
VAVSSTQAPKLGATESSKFSIKEVRRRFRIVTSEATKGIPSVSEDNLQKGQHWLNSSAFTIIKD
TRQLAEQTSEGKFSSSVMKDFRSSNSGRQKKRKNDGPTEKNSSIITSSKDESVFYDEARKHLTE
ILKDKRQTTKQHPTLEISRSLVRMLSFPQSSTSSPRSSPRAKDCIYLSPEEASIRAIYKSNKDL
LEEESQSGEFPENVVCDPSEALHEQAVQERWCVKEESQETTQEGAELDTLRTKEIDKLDCMGKN
SNAWGTPAKQCTYKPSQDMVGEAEPGQRHVRTFPSSPENDFEKLECQEPTTPRPSAQIEQISQF
SPDGNHEKQEQPSPQSVLDVFFLDGELHKDILRTRYNTTGDGSDQGIFWEDKHPRLCYIKELLE
LSELCANQNLE(+)
MLHKGIARAVRIVCKPELREHGGTQFQQTNSQKTYGGRATKAKTAEASK*(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	158119617-158121885(+) 158121832-158119701(+)
Potential amino acid sequence	MEEPSSSKPTVKRLMEDELRKLKQLKLPNDEVERILADLGHGACLDKSSAQNSKAKKGDQNHIR GITTTAAPSGSLDPTASNCIKEAEENELEFALADFLGRIHRNCNNNGELCTEMKALIQTKIAEL DNPPCTFAYEQQTSRGDEYDTAGGKHRCSSSKTQPKKFRDALEMLSSDTELFFQKSNSRILESA QRNQNRLIGNNLEPTKIADNTDSNKDPKSLNQHELATRRYGKESRNIFFWKKERSSPRQTAQGT SSSQPVNKIVILKPNPRREIGHAVAVSSTQAPKLGATESSKFSIKEVRRRFRIVTSEATKGIPS VSEDNLQKGQHWLNSSAFTIIKDTRQLAEQTSEGKFSSSVMKDFRSSNSGRQKKRKNDGPTEKN SSIITSSKDESVFYDEARKHLTEILKDKRQTTKQHPTLEISRSLVRMLSFPQSSTSSPRSSPRA KDCIYLSPEEASIRAIYKSNKDLLEEESQSGEFPENVVCDPSEALHEQAVQERWCVKEESQETT QEGAELDTLRTKEIDKLDCMGKNSNAWGTPAKQCTYKPSQDMVGEAEPGQRHVRTFPSSPENDF EKLECQEPTTPRPSAQIEQISQFSPDGNHEKQEQPSPQSVLDVFFLDGELHKDILRTRYNTTGD GSDQGIFWEDKHPRLCYIKELLELSELCANQNLENMEEPSSSKPTVKRLMEDELRKLKQLKLPN DEVERILADLGHGACLDKSSAQNSKAKKGDQNHIRGITTTAAPSGSLDPTASNCIKEAEENELE FALADFLGRIHRNCNNNGELCTEMKALIQTKIAELDNPPCTFAYEQQTSRGDEYDTAGGKHRCS SSKTQPKKFRDALEMLSSDTELFFQKSNSRILESAQRNQNRLIGNNLEPTKIADNTDSNKDPKS LNQHELATRRYGKESRNIFFWKKERSSPRQTAQGTSSSQPVNKIVILKPNPRREIGHAVAVSST QAPKLGATESSKFSIKEVRRRFRIVTSEATKGIPSVSEDNLQKGQHWLNSSAFTIIKDTRQLAE QTSEGKFSSSVMKDFRSSNSGRQKKRKNDGPTEKNSSIITSSKDESVFYDEARKHLTEILKDKR QTTKQHPTLEISRSLVRMLSFPQSSTSSPRSSPRAKDCIYLSPEEASIRAIYKSNKDLLEEESQ SGEFPENVVCDPSEALHEQAVQERWCVKEESQETTQEGAELDTLRTKEIDKLDCMGKNSNAWGT PAKQCTYKPSQDMVGEAEPGQRHVRTFPSSPENDFEKLECQEPTTPRPSAQIEQISQFSPDGNH EKQEQPSPQSVLDVFFLDGELHKDILRTRYNTTGDGSDQGIFWEDKHPRLCYIKELLELSELCA NQNLENMEEPSSSKPTVKRLMEDELRKLKQLKLPNDEVERILADLGHGACLDKSSAQNSKAKKG DQNHIRGITTTAAPSGSLDPTASNCIKEAEENELEFALADFLGRIHRNCNNNGELCTEMKALIQ TKIAELDNPPCTFAYEQQTSRGDEYDTAGGKHRCSSSKTQPKKFRDALEMLSSDTELFFQKSNS RILESAQRNQNRLIGNNLEPTKIADNTDSNKDPKSLNQHELATRRYGKESRNIFFWKKERSSPR QTAQGTSSSQPVNKIVILKPNPRREIGHAVAVSSTQAPKLGATESSKFSIKEVRRRFRIVTSEA TKGIPSVSEDNLQKGQHWLNSSAFTIIKDTRQLAEQTSEGKFSSSVMKDFRSSNSGRQKKRKND GPTEKNSSIITSSKDESVFYDEARKHLTEILKDKRQTTKQHPTLEISRSLVRMLSFPQSSTSSP RSSPRAKDCIYLSPEEASIRAIYKSNKDLLEEESQSGEFPENVVCDPSEALHEQAVQERWCVKE ESQETTQEGAELDTLRTKEIDKLDCMGKNSNAWGTPAKQCTYKPSQDMVGEAEPGQRHVRTFPS SPENDFEKLECQEPTTPRPSAQIEQISQFSPDGNHEKQEQPSPQSVLDVFFLDGELHKDILRTR YNTTGDGSDQGIFWEDKHPRLCYIKELLELSELCANQNLENMEEPSSSKPTVKRLMEDELRKLK QLKLPNDEVERILADLGHGACLDKSSAQNSKAKKGDQNHIRGITTTAAPSGSLDPTASNCIKEA EENELEFALADFLGRIHRNCNNNGELCTEMKALIQTKIAELDNPPCTFAYEQQTSRGDEYDTAG GKHRCSSSKTQPKKFRDALEMLSSDTELFFQKSNSRILESAQRNQNRLIGNNLEPTKIADNTDS NKDPKSLNQHELATRRYGKESRNIFFWKKERSSPRQTAQGTSSSQPVNKIVILKPNPRREIGHA VAVSSTQAPKLGATESSKFSIKEVRRRFRIVTSEATKGIPSVSEDNLQKGQHWLNSSAFTIIKD TRQLAEQTSEGKFSSSVMKDFRSSNSGRQKKRKNDGPTEKNSSIITSSKDESVFYDEARKHLTE ILKDKRQTTKQHPTLEISRSLVRMLSFPQSSTSSPRSSPRAKDCIYLSPEEASIRAIYKSNKDL LEEESQSGEFPENVVCDPSEALHEQAVQERWCVKEESQETTQEGAELDTLRTKEIDKLDCMGKN SNAWGTPAKQCTYKPSQDMVGEAEPGQRHVRTFPSSPENDFEKLECQEPTTPRPSAQIEQISQF SPDGNHEKQEQPSPQSVLDVFFLDGELHKDILRTRYNTTGDGSDQGIFWEDKHPRLCYIKELLE LSELCANQNLE(+) MLHKGIARAVRIVCKPELREHGGTQFQQTNSQKTYGGRATKAKTAEASK*(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020

circRNA

Detail information of Zm00001d048540_circ_g.1

Address

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