Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G07110_circ_g.22 |
ID in PlantcircBase | ath_circ_001116 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 2183217-2183509 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | CIRCexplorer, KNIFE, PcircRNA_finder, CIRI-full |
Parent gene | AT1G07110 |
Parent gene annotation |
FKFBP |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | 13/5 |
Tissues | aerial, whole_plant/seedlings |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G07110.1:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.442405788 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | responsive to heat stress |
Other Information | |
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References | Chu et al., 2017;Pan et al., 2017 |