Plant Circular RNA Database

Detail information of Os03g0358000_circ_g.5

			
						 General Information
					
						CircRNA Name
						Os03g0358000_circ_g.5
					
						ID in PlantcircBase
						osa_circ_019902
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr3: 13845811-13849457  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os03g0358000						
					
						Parent gene annotation
						
							Similar to PWWP domain containing protein, expressed. (Os03t0358
000-00)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							NA						
					
						Support reads
						1
					
						Tissues
						shoot
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os03t0358000-00:2

General Information
CircRNA Name	Os03g0358000_circ_g.5
ID in PlantcircBase	osa_circ_019902
Alias	NA
Organism	Oryza sativa
Position	chr3: 13845811-13849457 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os03g0358000
Parent gene annotation	Similar to PWWP domain containing protein, expressed. (Os03t0358 000-00)
Parent gene strand	-
Alternative splicing	NA
Support reads	1
Tissues	shoot
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os03t0358000-00:2

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGCCCTCAAAAAATCAGATCCTTTTCCCTGTCGCTTAGCAAGTAGAGACCTCCGTTTCTCTTCA
GTGAATGCTTCAAGATCTGCATAGTTGCAGAAAGCActctccagcaacgccatgtttggcacac
tcaattgcaagacgtgttgcacgcgctatattttcttttgttcttgtcagtgtaccaagaaaag
atccaaaa

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 2614
Transcript exons: 13845811-13846267,13847301-13849457
CTCTCCAGCAACGCCATGTTTGGCACACTCAATTGCAAGACGTGTTGCACGCGCTATATTTTCT
TTTGTTCTTGTCAGTGTACCAAGAAAAGATCCAAAAGCCTTTCGTGCTGCATTAGCCTCATCAT
GTCCTGTTAATTTGCTCAAGTTCTTCTGTTGCTGACTATCAAAAGGACTCCTAGAATGAATATT
ATCATTTGTAGATGTGGATCTGATTATCCGGTTCAAAGGTGACAATTGCTTCTGTGATCCTTCC
TTGAAAGCAGGTGTATCAACTACAGTTTCAGGAATATACTTGGCATTCAGAAAGTTATCTGGAA
AAGAAGTTGATCGAGAGAACCTTCTAGCTTGTGCAACAGCAATAAGTTCTTTCATAGGCATTGA
ATCTGGAGAAGTGCTCTTATCCTTTAGGTTTCTATGGTTCAGTTCTTTTAATGCCAAAGCTGAG
AAGGTGTGCACTTCAAATGTCCGGGTGTCTGCATCAGATTGTATACTGGAAGATTTAGTGGCCA
GCGAAGAGGTGCTTGCTGTATCAGCCACATTGACTACTGTTTCAGCTACAACAGTTTCATTATG
CAGTACAGAATCACTGATCGCATTATTGTTAGAAGAAAGCAACTTTGGTCGGTAAATTGGCTCA
TCACATCTTTGAACACTTCTGTCAGTATCATATGCAGGACGGTCAACTGGTTTTGGGCCTTCAT
TGAAGTTGATTGGTTTGGCAACCTCGCTAACACTAGCTGTCCCCAAAGATGAAGATAAACGATC
AGGTACAGCTACAGTCTGTGTACCACCAAGAGCAGACTCATTCAGCTTCATTGAAAGAGCCAAG
CCTTTCCCGCAGTCGTCATTGCCAACTTCACTAGAGACCAACAAGCAATCAGTAGTTTTGCTAT
CAACGTGAGTTTCTTCACAAATATTGCCTTCTGTAACATGACTGTCATCTTTTGCTTCTGAAGG
AACTGAAGCAGAAGCAGGAACACTGTTATTTTGCAGAATTGATTCTGAGGAGTGTGTTTTGCAC
TTTGGGCTATGCATGGATTCTGTGCACAAAGATGGCCTAGGGCTTTCTGCTATTGCAGATCCGT
TAGTGGCTGTGACTACTGCATCTGCAGATTTATTAGAGTGGCTGTTTTCTGAAGCCACAAAACC
ATTTGGAATCAATTGCTTTGACCCTGTCACTTCAGGCAGATTATTAGTTTCAGCAACATTAGCG
GACATAGCTTCTAAGGCACGATGAAGACGTTTTGATGGAGGCAAAGCAGCTTCAACATCCAATG
TTAAAACCTTTGGTTGATATTCTTTGTTCTTCCAAGCAGACTGACCTTCACCTGAGGGGCCAGG
CATGTATAACTTGGATGATTGATTTGAAACAGTATTTGCAACTCTTCCTGTCAAGGAAACACTA
TTTACCACTGCTGACTGATCGACTGAACAATCATCACCAGGTAGTGCAACTGTGTTATGCATAT
TACATAGGTCTGCAAGCATAGCAAGCTCTGGTCTGTTATTAGTAACATCAATCCCATCAACTGG
TGAGTCTTCCAACTGAGGCCTTCCCATTCGAACCCTTGCCCTTTTGACCAATGGCAAGTGCTCA
TCTCCATCTGACTTATTTACTTCAGTCTTTGGATTTGGAGAATCTGCCGTTTTTTCACTTAACT
CAGCCTGAAATTCATCATCCTTATCCGTAGAATGAGAAAAAATATTTCTACTTGGCTTTCTCTT
TCTCTTGAAAATAACTGATTTTTTCATGGGAATGCTTGATGCATCATGCGATTTAAATTGTGTC
TCTAAAGCCCCATTTTGAGATGTTTCACTGTCGCAGGTACTATCTACCTTAGTGGTATAATTCA
GCTTTTTATTGTTGTTACTGGTGCCAGGTGTGCCAGGTTGATTGTCGATGCCCGCACTTGAATG
CAACCAAACATCATCCTGTGTTGAAGGGGAACCTGAGTTACCTTTTACATCCTCAACATACACA
TGATGACTGGAACCTTCCTTAGTACCATCAGCAGCCAAATCAACTGAAGCCAAACAGGTTCCAC
CTGAAAGCTTGCCAGAATCCTGAGCTTTTCTTGTGTCAGTGTTCAGTGAACTTCTTGACCTCCG
CAGTGATGAAACCCTACTCCGTGTGTAGCAATTTTGAGGCTGTGCATCCCTTAGCTTCTTTGAA
ATTGAACTCGTAGACAAAGGGATGTTTCTCATTTCATCAAGGATAGACACATTTTCAGTAGGGT
CATCAGGAGCAGAATTTACAACACATCGCTCACTTCCAACTGCGGTAACAGAAGGCTCATCAGA
ATCGGCCGTATTATGACCACTTGCAACTATGGAATGGTCTTCTTGCTTTTTATCACTACCCATA
TTAGAGCTACTCACTAGACCCTCCGTATCCAAGCTGCTGTTATTATTAGCAAGTTTTTCTACAC
CTGGTTTCACTTCATTGGCAACCAAACCGAGCTTATTATTACCTTCCTTCAAAGAATCATAAAC
ATCGATTATCTCATCAACTGCCCTCAAAAAATCAGATCCTTTTCCCTGTCGCTTAGCAAGTAGA
GACCTCCGTTTCTCTTCAGTGAATGCTTCAAGATCTGCATAGTTGCAGAAAGCA
						
					

						Genomic sequence
						
							CTCTCCAGCAACGCCATGTTTGGCACACTCAATTGCAAGACGTGTTGCACGCGCTATATTTTCT
TTTGTTCTTGTCAGTGTACCAAGAAAAGATCCAAAAGCCTTTCGTGCTGCATTAGCCTCATCAT
GTCCTGTTAATTTGCTCAAGTTCTTCTGTTGCTGACTATCAAAAGGACTCCTAGAATGAATATT
ATCATTTGTAGATGTGGATCTGATTATCCGGTTCAAAGGTGACAATTGCTTCTGTGATCCTTCC
TTGAAAGCAGGTGTATCAACTACAGTTTCAGGAATATACTTGGCATTCAGAAAGTTATCTGGAA
AAGAAGTTGATCGAGAGAACCTTCTAGCTTGTGCAACAGCAATAAGTTCTTTCATAGGCATTGA
ATCTGGAGAAGTGCTCTTATCCTTTAGGTTTCTATGGTTCAGTTCTTTTAATGCCAAAGCTGAG
AAGGTGTGCCTGCAATACAACAATAAGTATTGTCATGCCTTTTCAGAAGACCATCTTAAATCAA
CTAATCAAGTATCAAATTTATAAAGTACTAATCCAGAGTTGTTATAGGAGTAATTCAAAGGTAC
AATATAAACCAAAAAAGTTGCTATTCCAGGCATTCTACATGAATAGGTCATAAGTTCATCAGAC
TGTACGTTGCAAAATAAGCATTCCTGCTAAGAAGGTTCAAAAGGTGTAGAGCTCAATGTATAGA
TTTCAGACATGAACCATAAGAATGATGTTTCCATTGGGACCTAAATATTGCTCTCCAGTCTCCA
CTGGCTAGTAATGTCAGGCTCCAAAAATAGGCTCTATAGTTAAAGCCAAAATAGAGCAGACAAA
TAAATTAGGGACGTATGGAGGTAGAAAACAGTCCCGATTAATTCTCCTTAATAAAGGATTGTGA
AGGAACTGAAATATCCCACAAAACATATATTAGGATCCACAAGCCCATAACATGGAAAGATTTA
GAATCTATATGATATAACTAAAGACGTTATAATCAGAATATTTGAAAACCCAAGTATCCAGCTC
ATAAAGCAACAAATCTACACAAGACAGGAGCATTAGAATAATAAGATCCTTGTTGATGAGTAAA
ACAAGATAACCATTCATGCCATTTATCCAGATTCCAGAGTGAATCAATTTGCCCACCTTTTTTG
TTCAGTCAACTAGATTATGAAGTGTTACCTATGTTTAAGACATACATTGACCCATTATTGAGTC
TCCAAAGAAATGCATTTTGATGGATGAAAACATCAGGTTGACATTACAAGGAAAAGAATTTCGT
AGGAAAAGAAAAATCAAATTGCATGGATGCTTCTTCTTCACAACTTTCTGAAGTTTCAATCAGA
AAATGCCAGCATAAATTTGGAAAAGAAGCATGCATGTCCTAAATTTGTCACAAAAAGGTTATGA
ACAAGAAGATATGGAGCATATAATGATAAACAAATATCTCATGCAGACATAATGGAAGATACAA
TTTGGCATGAAAGCTTACACTTCAAATGTCCGGGTGTCTGCATCAGATTGTATACTGGAAGATT
TAGTGGCCAGCGAAGAGGTGCTTGCTGTATCAGCCACATTGACTACTGTTTCAGCTACAACAGT
TTCATTATGCAGTACAGAATCACTGATCGCATTATTGTTAGAAGAAAGCAACTTTGGTCGGTAA
ATTGGCTCATCACATCTTTGAACACTTCTGTCAGTATCATATGCAGGACGGTCAACTGGTTTTG
GGCCTTCATTGAAGTTGATTGGTTTGGCAACCTCGCTAACACTAGCTGTCCCCAAAGATGAAGA
TAAACGATCAGGTACAGCTACAGTCTGTGTACCACCAAGAGCAGACTCATTCAGCTTCATTGAA
AGAGCCAAGCCTTTCCCGCAGTCGTCATTGCCAACTTCACTAGAGACCAACAAGCAATCAGTAG
TTTTGCTATCAACGTGAGTTTCTTCACAAATATTGCCTTCTGTAACATGACTGTCATCTTTTGC
TTCTGAAGGAACTGAAGCAGAAGCAGGAACACTGTTATTTTGCAGAATTGATTCTGAGGAGTGT
GTTTTGCACTTTGGGCTATGCATGGATTCTGTGCACAAAGATGGCCTAGGGCTTTCTGCTATTG
CAGATCCGTTAGTGGCTGTGACTACTGCATCTGCAGATTTATTAGAGTGGCTGTTTTCTGAAGC
CACAAAACCATTTGGAATCAATTGCTTTGACCCTGTCACTTCAGGCAGATTATTAGTTTCAGCA
ACATTAGCGGACATAGCTTCTAAGGCACGATGAAGACGTTTTGATGGAGGCAAAGCAGCTTCAA
CATCCAATGTTAAAACCTTTGGTTGATATTCTTTGTTCTTCCAAGCAGACTGACCTTCACCTGA
GGGGCCAGGCATGTATAACTTGGATGATTGATTTGAAACAGTATTTGCAACTCTTCCTGTCAAG
GAAACACTATTTACCACTGCTGACTGATCGACTGAACAATCATCACCAGGTAGTGCAACTGTGT
TATGCATATTACATAGGTCTGCAAGCATAGCAAGCTCTGGTCTGTTATTAGTAACATCAATCCC
ATCAACTGGTGAGTCTTCCAACTGAGGCCTTCCCATTCGAACCCTTGCCCTTTTGACCAATGGC
AAGTGCTCATCTCCATCTGACTTATTTACTTCAGTCTTTGGATTTGGAGAATCTGCCGTTTTTT
CACTTAACTCAGCCTGAAATTCATCATCCTTATCCGTAGAATGAGAAAAAATATTTCTACTTGG
CTTTCTCTTTCTCTTGAAAATAACTGATTTTTTCATGGGAATGCTTGATGCATCATGCGATTTA
AATTGTGTCTCTAAAGCCCCATTTTGAGATGTTTCACTGTCGCAGGTACTATCTACCTTAGTGG
TATAATTCAGCTTTTTATTGTTGTTACTGGTGCCAGGTGTGCCAGGTTGATTGTCGATGCCCGC
ACTTGAATGCAACCAAACATCATCCTGTGTTGAAGGGGAACCTGAGTTACCTTTTACATCCTCA
ACATACACATGATGACTGGAACCTTCCTTAGTACCATCAGCAGCCAAATCAACTGAAGCCAAAC
AGGTTCCACCTGAAAGCTTGCCAGAATCCTGAGCTTTTCTTGTGTCAGTGTTCAGTGAACTTCT
TGACCTCCGCAGTGATGAAACCCTACTCCGTGTGTAGCAATTTTGAGGCTGTGCATCCCTTAGC
TTCTTTGAAATTGAACTCGTAGACAAAGGGATGTTTCTCATTTCATCAAGGATAGACACATTTT
CAGTAGGGTCATCAGGAGCAGAATTTACAACACATCGCTCACTTCCAACTGCGGTAACAGAAGG
CTCATCAGAATCGGCCGTATTATGACCACTTGCAACTATGGAATGGTCTTCTTGCTTTTTATCA
CTACCCATATTAGAGCTACTCACTAGACCCTCCGTATCCAAGCTGCTGTTATTATTAGCAAGTT
TTTCTACACCTGGTTTCACTTCATTGGCAACCAAACCGAGCTTATTATTACCTTCCTTCAAAGA
ATCATAAACATCGATTATCTCATCAACTGCCCTCAAAAAATCAGATCCTTTTCCCTGTCGCTTA
GCAAGTAGAGACCTCCGTTTCTCTTCAGTGAATGCTTCAAGATCTGCATAGTTGCAGAAAGCA
						
					

			
		

Sequences
Splice junction sequence	TGCCCTCAAAAAATCAGATCCTTTTCCCTGTCGCTTAGCAAGTAGAGACCTCCGTTTCTCTTCA GTGAATGCTTCAAGATCTGCATAGTTGCAGAAAGCActctccagcaacgccatgtttggcacac tcaattgcaagacgtgttgcacgcgctatattttcttttgttcttgtcagtgtaccaagaaaag atccaaaa
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 2614 Transcript exons: 13845811-13846267,13847301-13849457 CTCTCCAGCAACGCCATGTTTGGCACACTCAATTGCAAGACGTGTTGCACGCGCTATATTTTCT TTTGTTCTTGTCAGTGTACCAAGAAAAGATCCAAAAGCCTTTCGTGCTGCATTAGCCTCATCAT GTCCTGTTAATTTGCTCAAGTTCTTCTGTTGCTGACTATCAAAAGGACTCCTAGAATGAATATT ATCATTTGTAGATGTGGATCTGATTATCCGGTTCAAAGGTGACAATTGCTTCTGTGATCCTTCC TTGAAAGCAGGTGTATCAACTACAGTTTCAGGAATATACTTGGCATTCAGAAAGTTATCTGGAA AAGAAGTTGATCGAGAGAACCTTCTAGCTTGTGCAACAGCAATAAGTTCTTTCATAGGCATTGA ATCTGGAGAAGTGCTCTTATCCTTTAGGTTTCTATGGTTCAGTTCTTTTAATGCCAAAGCTGAG AAGGTGTGCACTTCAAATGTCCGGGTGTCTGCATCAGATTGTATACTGGAAGATTTAGTGGCCA GCGAAGAGGTGCTTGCTGTATCAGCCACATTGACTACTGTTTCAGCTACAACAGTTTCATTATG CAGTACAGAATCACTGATCGCATTATTGTTAGAAGAAAGCAACTTTGGTCGGTAAATTGGCTCA TCACATCTTTGAACACTTCTGTCAGTATCATATGCAGGACGGTCAACTGGTTTTGGGCCTTCAT TGAAGTTGATTGGTTTGGCAACCTCGCTAACACTAGCTGTCCCCAAAGATGAAGATAAACGATC AGGTACAGCTACAGTCTGTGTACCACCAAGAGCAGACTCATTCAGCTTCATTGAAAGAGCCAAG CCTTTCCCGCAGTCGTCATTGCCAACTTCACTAGAGACCAACAAGCAATCAGTAGTTTTGCTAT CAACGTGAGTTTCTTCACAAATATTGCCTTCTGTAACATGACTGTCATCTTTTGCTTCTGAAGG AACTGAAGCAGAAGCAGGAACACTGTTATTTTGCAGAATTGATTCTGAGGAGTGTGTTTTGCAC TTTGGGCTATGCATGGATTCTGTGCACAAAGATGGCCTAGGGCTTTCTGCTATTGCAGATCCGT TAGTGGCTGTGACTACTGCATCTGCAGATTTATTAGAGTGGCTGTTTTCTGAAGCCACAAAACC ATTTGGAATCAATTGCTTTGACCCTGTCACTTCAGGCAGATTATTAGTTTCAGCAACATTAGCG GACATAGCTTCTAAGGCACGATGAAGACGTTTTGATGGAGGCAAAGCAGCTTCAACATCCAATG TTAAAACCTTTGGTTGATATTCTTTGTTCTTCCAAGCAGACTGACCTTCACCTGAGGGGCCAGG CATGTATAACTTGGATGATTGATTTGAAACAGTATTTGCAACTCTTCCTGTCAAGGAAACACTA TTTACCACTGCTGACTGATCGACTGAACAATCATCACCAGGTAGTGCAACTGTGTTATGCATAT TACATAGGTCTGCAAGCATAGCAAGCTCTGGTCTGTTATTAGTAACATCAATCCCATCAACTGG TGAGTCTTCCAACTGAGGCCTTCCCATTCGAACCCTTGCCCTTTTGACCAATGGCAAGTGCTCA TCTCCATCTGACTTATTTACTTCAGTCTTTGGATTTGGAGAATCTGCCGTTTTTTCACTTAACT CAGCCTGAAATTCATCATCCTTATCCGTAGAATGAGAAAAAATATTTCTACTTGGCTTTCTCTT TCTCTTGAAAATAACTGATTTTTTCATGGGAATGCTTGATGCATCATGCGATTTAAATTGTGTC TCTAAAGCCCCATTTTGAGATGTTTCACTGTCGCAGGTACTATCTACCTTAGTGGTATAATTCA GCTTTTTATTGTTGTTACTGGTGCCAGGTGTGCCAGGTTGATTGTCGATGCCCGCACTTGAATG CAACCAAACATCATCCTGTGTTGAAGGGGAACCTGAGTTACCTTTTACATCCTCAACATACACA TGATGACTGGAACCTTCCTTAGTACCATCAGCAGCCAAATCAACTGAAGCCAAACAGGTTCCAC CTGAAAGCTTGCCAGAATCCTGAGCTTTTCTTGTGTCAGTGTTCAGTGAACTTCTTGACCTCCG CAGTGATGAAACCCTACTCCGTGTGTAGCAATTTTGAGGCTGTGCATCCCTTAGCTTCTTTGAA ATTGAACTCGTAGACAAAGGGATGTTTCTCATTTCATCAAGGATAGACACATTTTCAGTAGGGT CATCAGGAGCAGAATTTACAACACATCGCTCACTTCCAACTGCGGTAACAGAAGGCTCATCAGA ATCGGCCGTATTATGACCACTTGCAACTATGGAATGGTCTTCTTGCTTTTTATCACTACCCATA TTAGAGCTACTCACTAGACCCTCCGTATCCAAGCTGCTGTTATTATTAGCAAGTTTTTCTACAC CTGGTTTCACTTCATTGGCAACCAAACCGAGCTTATTATTACCTTCCTTCAAAGAATCATAAAC ATCGATTATCTCATCAACTGCCCTCAAAAAATCAGATCCTTTTCCCTGTCGCTTAGCAAGTAGA GACCTCCGTTTCTCTTCAGTGAATGCTTCAAGATCTGCATAGTTGCAGAAAGCA
Genomic sequence	CTCTCCAGCAACGCCATGTTTGGCACACTCAATTGCAAGACGTGTTGCACGCGCTATATTTTCT TTTGTTCTTGTCAGTGTACCAAGAAAAGATCCAAAAGCCTTTCGTGCTGCATTAGCCTCATCAT GTCCTGTTAATTTGCTCAAGTTCTTCTGTTGCTGACTATCAAAAGGACTCCTAGAATGAATATT ATCATTTGTAGATGTGGATCTGATTATCCGGTTCAAAGGTGACAATTGCTTCTGTGATCCTTCC TTGAAAGCAGGTGTATCAACTACAGTTTCAGGAATATACTTGGCATTCAGAAAGTTATCTGGAA AAGAAGTTGATCGAGAGAACCTTCTAGCTTGTGCAACAGCAATAAGTTCTTTCATAGGCATTGA ATCTGGAGAAGTGCTCTTATCCTTTAGGTTTCTATGGTTCAGTTCTTTTAATGCCAAAGCTGAG AAGGTGTGCCTGCAATACAACAATAAGTATTGTCATGCCTTTTCAGAAGACCATCTTAAATCAA CTAATCAAGTATCAAATTTATAAAGTACTAATCCAGAGTTGTTATAGGAGTAATTCAAAGGTAC AATATAAACCAAAAAAGTTGCTATTCCAGGCATTCTACATGAATAGGTCATAAGTTCATCAGAC TGTACGTTGCAAAATAAGCATTCCTGCTAAGAAGGTTCAAAAGGTGTAGAGCTCAATGTATAGA TTTCAGACATGAACCATAAGAATGATGTTTCCATTGGGACCTAAATATTGCTCTCCAGTCTCCA CTGGCTAGTAATGTCAGGCTCCAAAAATAGGCTCTATAGTTAAAGCCAAAATAGAGCAGACAAA TAAATTAGGGACGTATGGAGGTAGAAAACAGTCCCGATTAATTCTCCTTAATAAAGGATTGTGA AGGAACTGAAATATCCCACAAAACATATATTAGGATCCACAAGCCCATAACATGGAAAGATTTA GAATCTATATGATATAACTAAAGACGTTATAATCAGAATATTTGAAAACCCAAGTATCCAGCTC ATAAAGCAACAAATCTACACAAGACAGGAGCATTAGAATAATAAGATCCTTGTTGATGAGTAAA ACAAGATAACCATTCATGCCATTTATCCAGATTCCAGAGTGAATCAATTTGCCCACCTTTTTTG TTCAGTCAACTAGATTATGAAGTGTTACCTATGTTTAAGACATACATTGACCCATTATTGAGTC TCCAAAGAAATGCATTTTGATGGATGAAAACATCAGGTTGACATTACAAGGAAAAGAATTTCGT AGGAAAAGAAAAATCAAATTGCATGGATGCTTCTTCTTCACAACTTTCTGAAGTTTCAATCAGA AAATGCCAGCATAAATTTGGAAAAGAAGCATGCATGTCCTAAATTTGTCACAAAAAGGTTATGA ACAAGAAGATATGGAGCATATAATGATAAACAAATATCTCATGCAGACATAATGGAAGATACAA TTTGGCATGAAAGCTTACACTTCAAATGTCCGGGTGTCTGCATCAGATTGTATACTGGAAGATT TAGTGGCCAGCGAAGAGGTGCTTGCTGTATCAGCCACATTGACTACTGTTTCAGCTACAACAGT TTCATTATGCAGTACAGAATCACTGATCGCATTATTGTTAGAAGAAAGCAACTTTGGTCGGTAA ATTGGCTCATCACATCTTTGAACACTTCTGTCAGTATCATATGCAGGACGGTCAACTGGTTTTG GGCCTTCATTGAAGTTGATTGGTTTGGCAACCTCGCTAACACTAGCTGTCCCCAAAGATGAAGA TAAACGATCAGGTACAGCTACAGTCTGTGTACCACCAAGAGCAGACTCATTCAGCTTCATTGAA AGAGCCAAGCCTTTCCCGCAGTCGTCATTGCCAACTTCACTAGAGACCAACAAGCAATCAGTAG TTTTGCTATCAACGTGAGTTTCTTCACAAATATTGCCTTCTGTAACATGACTGTCATCTTTTGC TTCTGAAGGAACTGAAGCAGAAGCAGGAACACTGTTATTTTGCAGAATTGATTCTGAGGAGTGT GTTTTGCACTTTGGGCTATGCATGGATTCTGTGCACAAAGATGGCCTAGGGCTTTCTGCTATTG CAGATCCGTTAGTGGCTGTGACTACTGCATCTGCAGATTTATTAGAGTGGCTGTTTTCTGAAGC CACAAAACCATTTGGAATCAATTGCTTTGACCCTGTCACTTCAGGCAGATTATTAGTTTCAGCA ACATTAGCGGACATAGCTTCTAAGGCACGATGAAGACGTTTTGATGGAGGCAAAGCAGCTTCAA CATCCAATGTTAAAACCTTTGGTTGATATTCTTTGTTCTTCCAAGCAGACTGACCTTCACCTGA GGGGCCAGGCATGTATAACTTGGATGATTGATTTGAAACAGTATTTGCAACTCTTCCTGTCAAG GAAACACTATTTACCACTGCTGACTGATCGACTGAACAATCATCACCAGGTAGTGCAACTGTGT TATGCATATTACATAGGTCTGCAAGCATAGCAAGCTCTGGTCTGTTATTAGTAACATCAATCCC ATCAACTGGTGAGTCTTCCAACTGAGGCCTTCCCATTCGAACCCTTGCCCTTTTGACCAATGGC AAGTGCTCATCTCCATCTGACTTATTTACTTCAGTCTTTGGATTTGGAGAATCTGCCGTTTTTT CACTTAACTCAGCCTGAAATTCATCATCCTTATCCGTAGAATGAGAAAAAATATTTCTACTTGG CTTTCTCTTTCTCTTGAAAATAACTGATTTTTTCATGGGAATGCTTGATGCATCATGCGATTTA AATTGTGTCTCTAAAGCCCCATTTTGAGATGTTTCACTGTCGCAGGTACTATCTACCTTAGTGG TATAATTCAGCTTTTTATTGTTGTTACTGGTGCCAGGTGTGCCAGGTTGATTGTCGATGCCCGC ACTTGAATGCAACCAAACATCATCCTGTGTTGAAGGGGAACCTGAGTTACCTTTTACATCCTCA ACATACACATGATGACTGGAACCTTCCTTAGTACCATCAGCAGCCAAATCAACTGAAGCCAAAC AGGTTCCACCTGAAAGCTTGCCAGAATCCTGAGCTTTTCTTGTGTCAGTGTTCAGTGAACTTCT TGACCTCCGCAGTGATGAAACCCTACTCCGTGTGTAGCAATTTTGAGGCTGTGCATCCCTTAGC TTCTTTGAAATTGAACTCGTAGACAAAGGGATGTTTCTCATTTCATCAAGGATAGACACATTTT CAGTAGGGTCATCAGGAGCAGAATTTACAACACATCGCTCACTTCCAACTGCGGTAACAGAAGG CTCATCAGAATCGGCCGTATTATGACCACTTGCAACTATGGAATGGTCTTCTTGCTTTTTATCA CTACCCATATTAGAGCTACTCACTAGACCCTCCGTATCCAAGCTGCTGTTATTATTAGCAAGTT TTTCTACACCTGGTTTCACTTCATTGGCAACCAAACCGAGCTTATTATTACCTTCCTTCAAAGA ATCATAAACATCGATTATCTCATCAACTGCCCTCAAAAAATCAGATCCTTTTCCCTGTCGCTTA GCAAGTAGAGACCTCCGTTTCTCTTCAGTGAATGCTTCAAGATCTGCATAGTTGCAGAAAGCA

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_004835* 						
					
						PMCS
						0.454788733

Conservation Information
Conserved circRNAs	osi_circ_004835*
PMCS	0.454788733

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							13849427-13845970(+)
13849212-13849433(-)
13845829-13849433(-)
						
					

						Potential amino acid sequence
						
							MLQDLHSCRKHSPATPCLAHSIARRVARAIFSFVLVSVPRKDPKAFRAALASSCPVNLLKFFCC
*(+)
MGSDKKQEDHSIVASGHNTADSDEPSVTAVGSERCVVNSAPDDPTENVSILDEMRNIPLSTSSI
SKKLRDAQPQNCYTRSRVSSLRRSRSSLNTDTRKAQDSGKLSGGTCLASVDLAADGTKEGSSHH
VYVEDVKGNSGSPSTQDDVWLHSSAGIDNQPGTPGTSNNNKKLNYTTKVDSTCDSETSQNGALE
TQFKSHDASSIPMKKSVIFKRKRKPSRNIFSHSTDKDDEFQAELSEKTADSPNPKTEVNKSDGD
EHLPLVKRARVRMGRPQLEDSPVDGIDVTNNRPELAMLADLCNMHNTVALPGDDCSVDQSAVVN
SVSLTGRVANTVSNQSSKLYMPGPSGEGQSAWKNKEYQPKVLTLDVEAALPPSKRLHRALEAMS
ANVAETNNLPEVTGSKQLIPNGFVASENSHSNKSADAVVTATNGSAIAESPRPSLCTESMHSPK
CKTHSSESILQNNSVPASASVPSEAKDDSHVTEGNICEETHVDSKTTDCLLVSSEVGNDDCGKG
LALSMKLNESALGGTQTVAVPDRLSSSLGTASVSEVAKPINFNEGPKPVDRPAYDTDRSVQRCD
EPIYRPKLLSSNNNAISDSVLHNETVVAETVVNVADTASTSSLATKSSSIQSDADTRTFEVHTF
SALALKELNHRNLKDKSTSPDSMPMKELIAVAQARRFSRSTSFPDNFLNAKYIPETVVDTPAFK
EGSQKQLSPLNRIIRSTSTNDNIHSRSPFDSQQQKNLSKLTGHDEANAARKAFGSFLGTLTRTK
ENIARATRLAIECAKHGVAGECFLQLCRS*(-)
MALLESAFCNYADLEAFTEEKRRSLLAKRQGKGSDFLRAVDEIIDVYDSLKEGNNKLGLVANEV
KPGVEKLANNNSSLDTEGLVSSSNMGSDKKQEDHSIVASGHNTADSDEPSVTAVGSERCVVNSA
PDDPTENVSILDEMRNIPLSTSSISKKLRDAQPQNCYTRSRVSSLRRSRSSLNTDTRKAQDSGK
LSGGTCLASVDLAADGTKEGSSHHVYVEDVKGNSGSPSTQDDVWLHSSAGIDNQPGTPGTSNNN
KKLNYTTKVDSTCDSETSQNGALETQFKSHDASSIPMKKSVIFKRKRKPSRNIFSHSTDKDDEF
QAELSEKTADSPNPKTEVNKSDGDEHLPLVKRARVRMGRPQLEDSPVDGIDVTNNRPELAMLAD
LCNMHNTVALPGDDCSVDQSAVVNSVSLTGRVANTVSNQSSKLYMPGPSGEGQSAWKNKEYQPK
VLTLDVEAALPPSKRLHRALEAMSANVAETNNLPEVTGSKQLIPNGFVASENSHSNKSADAVVT
ATNGSAIAESPRPSLCTESMHSPKCKTHSSESILQNNSVPASASVPSEAKDDSHVTEGNICEET
HVDSKTTDCLLVSSEVGNDDCGKGLALSMKLNESALGGTQTVAVPDRLSSSLGTASVSEVAKPI
NFNEGPKPVDRPAYDTDRSVQRCDEPIYRPKLLSSNNNAISDSVLHNETVVAETVVNVADTAST
SSLATKSSSIQSDADTRTFEVHTFSALALKELNHRNLKDKSTSPDSMPMKELIAVAQARRFSRS
TSFPDNFLNAKYIPETVVDTPAFKEGSQKQLSPLNRIIRSTSTNDNIHSRSPFDSQQQKNLSKL
TGHDEANAARKAFGSFLGTLTRTKENIARATRLAIECAKHGVAGECFLQLCRS*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	13849427-13845970(+) 13849212-13849433(-) 13845829-13849433(-)
Potential amino acid sequence	MLQDLHSCRKHSPATPCLAHSIARRVARAIFSFVLVSVPRKDPKAFRAALASSCPVNLLKFFCC (+) MGSDKKQEDHSIVASGHNTADSDEPSVTAVGSERCVVNSAPDDPTENVSILDEMRNIPLSTSSI SKKLRDAQPQNCYTRSRVSSLRRSRSSLNTDTRKAQDSGKLSGGTCLASVDLAADGTKEGSSHH VYVEDVKGNSGSPSTQDDVWLHSSAGIDNQPGTPGTSNNNKKLNYTTKVDSTCDSETSQNGALE TQFKSHDASSIPMKKSVIFKRKRKPSRNIFSHSTDKDDEFQAELSEKTADSPNPKTEVNKSDGD EHLPLVKRARVRMGRPQLEDSPVDGIDVTNNRPELAMLADLCNMHNTVALPGDDCSVDQSAVVN SVSLTGRVANTVSNQSSKLYMPGPSGEGQSAWKNKEYQPKVLTLDVEAALPPSKRLHRALEAMS ANVAETNNLPEVTGSKQLIPNGFVASENSHSNKSADAVVTATNGSAIAESPRPSLCTESMHSPK CKTHSSESILQNNSVPASASVPSEAKDDSHVTEGNICEETHVDSKTTDCLLVSSEVGNDDCGKG LALSMKLNESALGGTQTVAVPDRLSSSLGTASVSEVAKPINFNEGPKPVDRPAYDTDRSVQRCD EPIYRPKLLSSNNNAISDSVLHNETVVAETVVNVADTASTSSLATKSSSIQSDADTRTFEVHTF SALALKELNHRNLKDKSTSPDSMPMKELIAVAQARRFSRSTSFPDNFLNAKYIPETVVDTPAFK EGSQKQLSPLNRIIRSTSTNDNIHSRSPFDSQQQKNLSKLTGHDEANAARKAFGSFLGTLTRTK ENIARATRLAIECAKHGVAGECFLQLCRS(-) MALLESAFCNYADLEAFTEEKRRSLLAKRQGKGSDFLRAVDEIIDVYDSLKEGNNKLGLVANEV KPGVEKLANNNSSLDTEGLVSSSNMGSDKKQEDHSIVASGHNTADSDEPSVTAVGSERCVVNSA PDDPTENVSILDEMRNIPLSTSSISKKLRDAQPQNCYTRSRVSSLRRSRSSLNTDTRKAQDSGK LSGGTCLASVDLAADGTKEGSSHHVYVEDVKGNSGSPSTQDDVWLHSSAGIDNQPGTPGTSNNN KKLNYTTKVDSTCDSETSQNGALETQFKSHDASSIPMKKSVIFKRKRKPSRNIFSHSTDKDDEF QAELSEKTADSPNPKTEVNKSDGDEHLPLVKRARVRMGRPQLEDSPVDGIDVTNNRPELAMLAD LCNMHNTVALPGDDCSVDQSAVVNSVSLTGRVANTVSNQSSKLYMPGPSGEGQSAWKNKEYQPK VLTLDVEAALPPSKRLHRALEAMSANVAETNNLPEVTGSKQLIPNGFVASENSHSNKSADAVVT ATNGSAIAESPRPSLCTESMHSPKCKTHSSESILQNNSVPASASVPSEAKDDSHVTEGNICEET HVDSKTTDCLLVSSEVGNDDCGKGLALSMKLNESALGGTQTVAVPDRLSSSLGTASVSEVAKPI NFNEGPKPVDRPAYDTDRSVQRCDEPIYRPKLLSSNNNAISDSVLHNETVVAETVVNVADTAST SSLATKSSSIQSDADTRTFEVHTFSALALKELNHRNLKDKSTSPDSMPMKELIAVAQARRFSRS TSFPDNFLNAKYIPETVVDTPAFKEGSQKQLSPLNRIIRSTSTNDNIHSRSPFDSQQQKNLSKL TGHDEANAARKAFGSFLGTLTRTKENIARATRLAIECAKHGVAGECFLQLCRS*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os03g0358000_circ_g.5

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