Plant Circular RNA Database

Detail information of Zm00001d049038_circ_g.4

			
						 General Information
					
						CircRNA Name
						Zm00001d049038_circ_g.4
					
						ID in PlantcircBase
						zma_circ_007972
					
						Alias
						zma_circ_0001543
					
						Organism
						
							Zea mays						
					
						Position
						
							chr4: 13498859-13503560  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Zm00001d049038						
					
						Parent gene annotation
						
							mRNA capping enzyme family protein
							
						Parent gene strand
						+
					
						Alternative splicing
						
							NA						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d049038_T009:10
Zm00001d049038_T010:9
Zm00001d049038_T002:9
Zm00001d049038_T018:10
Zm00001d049038_T016:10
Zm00001d049038_T003:9
Zm00001d049038_T005:10
Zm00001d049038_T001:10
Zm00001d049038_T014:10
Zm00001d049038_T007:10
Zm00001d049038_T013:10
Zm00001d049038_T012:6
Zm00001d049038_T006:10
Zm00001d049038_T015:10
Zm00001d049038_T008:10
Zm00001d049038_T017:10
Zm00001d049038_T011:10

General Information
CircRNA Name	Zm00001d049038_circ_g.4
ID in PlantcircBase	zma_circ_007972
Alias	zma_circ_0001543
Organism	Zea mays
Position	chr4: 13498859-13503560 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	find_circ
Parent gene	Zm00001d049038
Parent gene annotation	mRNA capping enzyme family protein
Parent gene strand	+
Alternative splicing	NA
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d049038_T009:10 Zm00001d049038_T010:9 Zm00001d049038_T002:9 Zm00001d049038_T018:10 Zm00001d049038_T016:10 Zm00001d049038_T003:9 Zm00001d049038_T005:10 Zm00001d049038_T001:10 Zm00001d049038_T014:10 Zm00001d049038_T007:10 Zm00001d049038_T013:10 Zm00001d049038_T012:6 Zm00001d049038_T006:10 Zm00001d049038_T015:10 Zm00001d049038_T008:10 Zm00001d049038_T017:10 Zm00001d049038_T011:10

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GGTTAGAAGAAAAGATTTTTGGCTGCTCTCAACAGTAAAAAAGGTTCTTAAGGTGTTCATTCCA
TCCCTTTGCCATGATGCTGATGGCCTTATATTTCAGataggtctggtgattgatttgacaaata
ccaccaggtattattcaccagctgaatggacgaagcaaggtactaagtatgcgaaggtgagatc
gcttagct

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							ATAGGTCTGGTGATTGATTTGACAAATACCACCAGGTATTATTCACCAGCTGAATGGACGAAGC
AAGGTACTAAGTATGCGAAGGTGAGATCGCTTAGCTTAAATGCTTTCTTGTTTCTCAAGGACCT
TTTCTTAACTAACAAAGTTTTTGGTTTAGATTGCATGCAAGGGGAGAGATGCGGTACCTGACAA
TGAATCTGTTAATAAGTTTGTCTATGAGGTACAATCATGCATATATCTGCAAAAGCATTATATT
TGACTCTTGATATTATATATGTCCATTTCTTCTTTTTGTGTGTGCGTGTGCGTGCGTGCGTGTG
TGTGTGTGTGGGGGGGGGGGGGGTCATGCACTACTGTCAAGAACTTGTTTCCTGTTCCACCCCT
GGGCACTGGTGCTTTTGCTCCAAGGTTATTTTATTTATTGTACTTATCTTATTTTTGATGCCTG
ACTTGGCAATACGAGTGATGCAAGAAGCATATATTGTCAACGATAAGATGTGCTTATCTGAATC
TTAGAAGTACAGTTGGAGTGGAAATTGTTAGGTGGTGGCTCGCACGCACGCAGAGTTGCCTATC
AGGTAGATTTAGCATGGACTTAATCAATCCAGTCAGGGATGAAACTGGATCGGATACAAACAGA
TATTATGGCGGGTACTGACTACGGGTAGTCGTTTCTTTCCGGGATTCGGAGTCAAATACGGAAA
GTGTCGATATGTCGGAGTCGGATATTGATATCTTATGTAATAATGTATCAGAAATCTAACTTTG
AGTATTCGGGTTCGGATATGGTACAGATACTAAATCTCTGGATTCATACATGGATTATCAAAGT
AGGGTTTAATTCCTTCTGGATCGGACTGGTATTGACAATATCCGTCCTGTTTGCATCCCTAAAT
CCACTTATTCACACTTAGTCGTTGTTGTGAGCCCATTGTCGACGGCGAACACATACCATCTCTT
GCTATTCTGTTCCCATCTGCTAGCCCGTCTATTGTTTATGGTATTGTCATCACTCATCAGGTTT
GTGTGATGTATTACATTTTCTACCTTTTTTTATGTTCTGTTAGACTGCTACATGCCCATTGTAT
TGCTAATTGTTGGATGAGTAATTTGTTTTCTTGAGTAAAAAGGCAATTTTGTTTTGACTACTGA
AATACATGCACACAACAGCTGGGAGGAGCTGCTACTGTCCTCTAGAGGCTTGGTTTTAACTGCG
GCGGTAGTAATAGAATCAGCAGCGGCAGTAAAGGAGCAAATTTTGTTTTTGTGTATGTACTATC
TAGAACATAGTTGTTGCTAGCCGCAGTGAAGCAGTACAGCAGGCTGGAAACTGTAGCAAGCTGA
CCTAAGTGCATATATAATCAGCCTGGTCAGCTGTGATCATCTTAACTGCCGCTGCAAAGATTCC
AGTGCTCATCTCACTGATTGCATACATCAGTTCCAAGTTTCATCTCACTGATAGCAGCAGCTGC
AGCTGCAGTGCAGCCAAATGAAACAGTGGATCAGGCTGAATGAGGGTACTACTACCTCATGTAC
ACATAACCTTTGCGAGTTAGAATGAACAATCTGCAGTGGTTCCTCTCCTTTCATCATTTTCTTT
CCAATACTCGTTAGTTAGGGTTATCATTAATTTCAAAGGGGCCTGCACCCTTTTGCATTTTGGC
ATTCTTGGATTCTCTATAACAAATTGATTTGGACACCGCTTATCAGTAACCTGGTCATTTTCTT
TTGCCCTGAAGCATTCTTGGGTGTAACCCAGATATCATCAATTTCCACTTTGTAGAACAAAATG
ACTATTGACTATTTAGGTTAGTCACCATTTTTAACATTTTTTATTGTTCTTTCAGGCAATGATA
TTCCTTGATCGACAAAAACATTCAAAGAATCCTAAATATATTCTGGTTCACTGTACCCATGGTC
ATAATCGTACCGGTTTCATGATTATTCATTACCTTATGCGCACACACGTATCTTGTGTTGCTGA
GGTAGGGATACTAGACCCCAAATGATATTTGATTGATTCTATTCTTCAGTATTACATGGCTTTT
TTTTTCTAGGCGATAAATATGTTTGCTCAAAGGCGGCCACCTGGCATATACAAGAGGGACTATA
TTGAAGCACTATATTCATTTTACCATGAGGTCCCTGAGAATATGATGATAGCATGCCCTCCAAC
ACCAGAATGGAAGAGACCAGATGATCTCGATTTAAATGGCGAAGCTAAGCAGGATGATGACGAC
GACAATGGTGATCCAGAACCACCGCGTGTAAGTGTTTTCTTCAAAATTTATAGGAAATTATCGG
ATCTACTTATATTGTTTATGAGATAGAGTTAACTATTGCTTGCGCCCTTGGTATTACCTCACTA
TATGGTTTCATTATTAAGCGATGCCGTTTGCAACTTTGCATTGTTTCTTAATGTTTTGACACCA
CAATACATTTACAGAATGAATCAGAGGATAAAATCATCACCAACGACGATGTGTTAGGGGACGA
AGTGCCATATGACCAGCAAGAAGCTTTGCGTGTGCTATGTTATAAGTTGCTTGAAATGCCCCTT
GTAAGTAGGCTATTTCTACTTCTGCTCAATATATTATGTATTAATTTTGTATATGCTTTACAAT
GAAAACATGGATTATGACAATTGATAACCTTATCTAGAATATAGTTCTAATACCACCAAACCCA
TCTTTAGTAACTATTTTATTTCTGGGAGCATAACTTAAAAGTTAGCATGGAGCAGATGCATGAA
TATTTCATGTCATGCAATGCAACGCAGGCTGAGAATGTGAGAGTTTGACATGCTGGTCTGGCAA
AATACTTTTGTGCTACATAACAAGGTGGTACATTAACAATGTATTTTTCAACATAATCCATCTG
GAAGCTTGAAAGTTAAATAAGGCTCAGAACGACATTTTGGAAATGCTGGGAACTAATAGAATTT
TGTCATGATTAATCTTGTTTCAGTTTATAGATATATCATGTTTTATATCTATTGTTCTATGCAC
TACTTTGAGTTGAATTGGTTTGTGGAGTAAATTTCTGCAAGTTTCTGCATGTGTTGCTCTCAAA
CAAGTAGTGCCTTTTTTTATTTAGAGTGTTCTGATCACCTTTATTTGTTTATAGATAAGGGGAC
ATTCACAATTTCCTGGATCACATCCAGTTTCTCTTAACAGGTGAGTAATCTCAACCAGTAACTC
AAATTCTCTTACAATTTTTTGTGCATTGTGATATTTTTTGTTCCTATGTTGTATACAGGACATG
AAGGAAAATCTTGTAAGGAAATGGAACCACTATTACATGCTAATTTTTATAAAGTAAAAAAGCT
TAGGGGTTAGGCAGCTGGATGCATAAATAAGTTTAAAGTATTGCATCATGCAGTTTTTTTAGAA
TTGTGTCACACTTGATGAGTTCCTTGTAATCCAATTCTGATATTTTGTTTCAAATTTCTATTCT
CAGAGAATTAGAAGTTTTGGTTCTTTTTGTATAAGTTCTCATTTTAGCTCATATGTTAAACATA
TATCCTTTTTTTTATTTAACACACTTTTTTTGCTTGTTTAGTGAAAATCTGCAACTACTTAGAC
AGCGATACTACTATGCTACATGGAAAGCTGACGGAACACGATATATGATGCTTATAATGAGAGA
TGGTTGTTTCTTGATTGATCGAAATTTTTGCTTTAGAAGGGTTCAGATGCGCTTTCCCCATAAG
AGCCTTGAAGTAAGGTTCCGATTCTGCTGGAGAAACAATCATAGAACATGCCTCTTATTGTAAA
ACTTTAATCTTATTTCTCTGCTATGAAGGGTCTGCATGATATGACCTTGATTGATGGAGAGATG
ATTATAGACACGGTACCAGATTCAGGCTTGAAGAGAAGGTACTTGGCATATGATCTTATGGCAC
TTGGTGCAGTGTCCAAAACTAAGGTAACATGTTGTGGAATGATATATACTCTCCACGTTCCAAA
TTACAAGACATTTTGGCTTTCCTAGATACACTGTTTTTCCTGTGTATCTAGACTAAGTGTATGT
ATAAATGCATAGCAAAAGCTATTTCTGTAAATAAAAGCTAAGACGTCTCATAATTTGGAATGGA
GTTTTTACTTATTTCTGACTTAGTCTTTTATCCATGTAACTTGGCACCCTTAGTAAAGAGAGGA
GATGTAATAAGCATCCTTTCTGAATTATTTCTTGGTACCTGCACTCATGTTCACACCATCAATG
TTTTGCTTATCTTCGCCATAGCATGGTTAGCAGATTAGTGAACTATTTCTGTTGAACTTCTATA
TGTGAGCTTTAAGCTCTATTGTACTGTAGGGTATAAACACAAATTATTGTGGCTTGGAATTATC
TCTAACTATGTAAATTTGTGTATGCAGTTGCCGTTTTCTGAAAGGTGGAAAATGCTGGAAGATG
AAATAATACGACCACGTTATTATGAGAAAAATAAATTTGAGAGTGGTTCTAAGAGCAATCCGTT
GTACAAATATGACATGGAATTATTTTCGGTATCAGATTCTAGGATTCCTCCTGAACTATAATGT
TCAATTCATGTCCTGCAAAGTTAATTTTCTCTTTTTCGTTTATTATATGACTTTACCAGGTTAG
AAGAAAAGATTTTTGGCTGCTCTCAACAGTAAAAAAGGTTCTTAAGGTGTTCATTCCATCCCTT
TGCCATGATGCTGATGGCCTTATATTTCAG
						
					

			
		

Sequences
Splice junction sequence	GGTTAGAAGAAAAGATTTTTGGCTGCTCTCAACAGTAAAAAAGGTTCTTAAGGTGTTCATTCCA TCCCTTTGCCATGATGCTGATGGCCTTATATTTCAGataggtctggtgattgatttgacaaata ccaccaggtattattcaccagctgaatggacgaagcaaggtactaagtatgcgaaggtgagatc gcttagct
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	ATAGGTCTGGTGATTGATTTGACAAATACCACCAGGTATTATTCACCAGCTGAATGGACGAAGC AAGGTACTAAGTATGCGAAGGTGAGATCGCTTAGCTTAAATGCTTTCTTGTTTCTCAAGGACCT TTTCTTAACTAACAAAGTTTTTGGTTTAGATTGCATGCAAGGGGAGAGATGCGGTACCTGACAA TGAATCTGTTAATAAGTTTGTCTATGAGGTACAATCATGCATATATCTGCAAAAGCATTATATT TGACTCTTGATATTATATATGTCCATTTCTTCTTTTTGTGTGTGCGTGTGCGTGCGTGCGTGTG TGTGTGTGTGGGGGGGGGGGGGGTCATGCACTACTGTCAAGAACTTGTTTCCTGTTCCACCCCT GGGCACTGGTGCTTTTGCTCCAAGGTTATTTTATTTATTGTACTTATCTTATTTTTGATGCCTG ACTTGGCAATACGAGTGATGCAAGAAGCATATATTGTCAACGATAAGATGTGCTTATCTGAATC TTAGAAGTACAGTTGGAGTGGAAATTGTTAGGTGGTGGCTCGCACGCACGCAGAGTTGCCTATC AGGTAGATTTAGCATGGACTTAATCAATCCAGTCAGGGATGAAACTGGATCGGATACAAACAGA TATTATGGCGGGTACTGACTACGGGTAGTCGTTTCTTTCCGGGATTCGGAGTCAAATACGGAAA GTGTCGATATGTCGGAGTCGGATATTGATATCTTATGTAATAATGTATCAGAAATCTAACTTTG AGTATTCGGGTTCGGATATGGTACAGATACTAAATCTCTGGATTCATACATGGATTATCAAAGT AGGGTTTAATTCCTTCTGGATCGGACTGGTATTGACAATATCCGTCCTGTTTGCATCCCTAAAT CCACTTATTCACACTTAGTCGTTGTTGTGAGCCCATTGTCGACGGCGAACACATACCATCTCTT GCTATTCTGTTCCCATCTGCTAGCCCGTCTATTGTTTATGGTATTGTCATCACTCATCAGGTTT GTGTGATGTATTACATTTTCTACCTTTTTTTATGTTCTGTTAGACTGCTACATGCCCATTGTAT TGCTAATTGTTGGATGAGTAATTTGTTTTCTTGAGTAAAAAGGCAATTTTGTTTTGACTACTGA AATACATGCACACAACAGCTGGGAGGAGCTGCTACTGTCCTCTAGAGGCTTGGTTTTAACTGCG GCGGTAGTAATAGAATCAGCAGCGGCAGTAAAGGAGCAAATTTTGTTTTTGTGTATGTACTATC TAGAACATAGTTGTTGCTAGCCGCAGTGAAGCAGTACAGCAGGCTGGAAACTGTAGCAAGCTGA CCTAAGTGCATATATAATCAGCCTGGTCAGCTGTGATCATCTTAACTGCCGCTGCAAAGATTCC AGTGCTCATCTCACTGATTGCATACATCAGTTCCAAGTTTCATCTCACTGATAGCAGCAGCTGC AGCTGCAGTGCAGCCAAATGAAACAGTGGATCAGGCTGAATGAGGGTACTACTACCTCATGTAC ACATAACCTTTGCGAGTTAGAATGAACAATCTGCAGTGGTTCCTCTCCTTTCATCATTTTCTTT CCAATACTCGTTAGTTAGGGTTATCATTAATTTCAAAGGGGCCTGCACCCTTTTGCATTTTGGC ATTCTTGGATTCTCTATAACAAATTGATTTGGACACCGCTTATCAGTAACCTGGTCATTTTCTT TTGCCCTGAAGCATTCTTGGGTGTAACCCAGATATCATCAATTTCCACTTTGTAGAACAAAATG ACTATTGACTATTTAGGTTAGTCACCATTTTTAACATTTTTTATTGTTCTTTCAGGCAATGATA TTCCTTGATCGACAAAAACATTCAAAGAATCCTAAATATATTCTGGTTCACTGTACCCATGGTC ATAATCGTACCGGTTTCATGATTATTCATTACCTTATGCGCACACACGTATCTTGTGTTGCTGA GGTAGGGATACTAGACCCCAAATGATATTTGATTGATTCTATTCTTCAGTATTACATGGCTTTT TTTTTCTAGGCGATAAATATGTTTGCTCAAAGGCGGCCACCTGGCATATACAAGAGGGACTATA TTGAAGCACTATATTCATTTTACCATGAGGTCCCTGAGAATATGATGATAGCATGCCCTCCAAC ACCAGAATGGAAGAGACCAGATGATCTCGATTTAAATGGCGAAGCTAAGCAGGATGATGACGAC GACAATGGTGATCCAGAACCACCGCGTGTAAGTGTTTTCTTCAAAATTTATAGGAAATTATCGG ATCTACTTATATTGTTTATGAGATAGAGTTAACTATTGCTTGCGCCCTTGGTATTACCTCACTA TATGGTTTCATTATTAAGCGATGCCGTTTGCAACTTTGCATTGTTTCTTAATGTTTTGACACCA CAATACATTTACAGAATGAATCAGAGGATAAAATCATCACCAACGACGATGTGTTAGGGGACGA AGTGCCATATGACCAGCAAGAAGCTTTGCGTGTGCTATGTTATAAGTTGCTTGAAATGCCCCTT GTAAGTAGGCTATTTCTACTTCTGCTCAATATATTATGTATTAATTTTGTATATGCTTTACAAT GAAAACATGGATTATGACAATTGATAACCTTATCTAGAATATAGTTCTAATACCACCAAACCCA TCTTTAGTAACTATTTTATTTCTGGGAGCATAACTTAAAAGTTAGCATGGAGCAGATGCATGAA TATTTCATGTCATGCAATGCAACGCAGGCTGAGAATGTGAGAGTTTGACATGCTGGTCTGGCAA AATACTTTTGTGCTACATAACAAGGTGGTACATTAACAATGTATTTTTCAACATAATCCATCTG GAAGCTTGAAAGTTAAATAAGGCTCAGAACGACATTTTGGAAATGCTGGGAACTAATAGAATTT TGTCATGATTAATCTTGTTTCAGTTTATAGATATATCATGTTTTATATCTATTGTTCTATGCAC TACTTTGAGTTGAATTGGTTTGTGGAGTAAATTTCTGCAAGTTTCTGCATGTGTTGCTCTCAAA CAAGTAGTGCCTTTTTTTATTTAGAGTGTTCTGATCACCTTTATTTGTTTATAGATAAGGGGAC ATTCACAATTTCCTGGATCACATCCAGTTTCTCTTAACAGGTGAGTAATCTCAACCAGTAACTC AAATTCTCTTACAATTTTTTGTGCATTGTGATATTTTTTGTTCCTATGTTGTATACAGGACATG AAGGAAAATCTTGTAAGGAAATGGAACCACTATTACATGCTAATTTTTATAAAGTAAAAAAGCT TAGGGGTTAGGCAGCTGGATGCATAAATAAGTTTAAAGTATTGCATCATGCAGTTTTTTTAGAA TTGTGTCACACTTGATGAGTTCCTTGTAATCCAATTCTGATATTTTGTTTCAAATTTCTATTCT CAGAGAATTAGAAGTTTTGGTTCTTTTTGTATAAGTTCTCATTTTAGCTCATATGTTAAACATA TATCCTTTTTTTTATTTAACACACTTTTTTTGCTTGTTTAGTGAAAATCTGCAACTACTTAGAC AGCGATACTACTATGCTACATGGAAAGCTGACGGAACACGATATATGATGCTTATAATGAGAGA TGGTTGTTTCTTGATTGATCGAAATTTTTGCTTTAGAAGGGTTCAGATGCGCTTTCCCCATAAG AGCCTTGAAGTAAGGTTCCGATTCTGCTGGAGAAACAATCATAGAACATGCCTCTTATTGTAAA ACTTTAATCTTATTTCTCTGCTATGAAGGGTCTGCATGATATGACCTTGATTGATGGAGAGATG ATTATAGACACGGTACCAGATTCAGGCTTGAAGAGAAGGTACTTGGCATATGATCTTATGGCAC TTGGTGCAGTGTCCAAAACTAAGGTAACATGTTGTGGAATGATATATACTCTCCACGTTCCAAA TTACAAGACATTTTGGCTTTCCTAGATACACTGTTTTTCCTGTGTATCTAGACTAAGTGTATGT ATAAATGCATAGCAAAAGCTATTTCTGTAAATAAAAGCTAAGACGTCTCATAATTTGGAATGGA GTTTTTACTTATTTCTGACTTAGTCTTTTATCCATGTAACTTGGCACCCTTAGTAAAGAGAGGA GATGTAATAAGCATCCTTTCTGAATTATTTCTTGGTACCTGCACTCATGTTCACACCATCAATG TTTTGCTTATCTTCGCCATAGCATGGTTAGCAGATTAGTGAACTATTTCTGTTGAACTTCTATA TGTGAGCTTTAAGCTCTATTGTACTGTAGGGTATAAACACAAATTATTGTGGCTTGGAATTATC TCTAACTATGTAAATTTGTGTATGCAGTTGCCGTTTTCTGAAAGGTGGAAAATGCTGGAAGATG AAATAATACGACCACGTTATTATGAGAAAAATAAATTTGAGAGTGGTTCTAAGAGCAATCCGTT GTACAAATATGACATGGAATTATTTTCGGTATCAGATTCTAGGATTCCTCCTGAACTATAATGT TCAATTCATGTCCTGCAAAGTTAATTTTCTCTTTTTCGTTTATTATATGACTTTACCAGGTTAG AAGAAAAGATTTTTGGCTGCTCTCAACAGTAAAAAAGGTTCTTAAGGTGTTCATTCCATCCCTT TGCCATGATGCTGATGGCCTTATATTTCAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.105630705

Conservation Information
Conserved circRNAs	NA
PMCS	0.105630705

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							13500710-13503557(+)
						
					

						Potential amino acid sequence
						
							MIFLDRQKHSKNPKYILVHCTHGHNRTGFMIIHYLMRTHVSCVAEAINMFAQRRPPGIYKRDYI
EALYSFYHEVPENMMIACPPTPEWKRPDDLDLNGEAKQDDDDDNGDPEPPRNESEDKIITNDDV
LGDEVPYDQQEALRVLCYKLLEMPLIRGHSQFPGSHPVSLNSENLQLLRQRYYYATWKADGTRY
MMLIMRDGCFLIDRNFCFRRVQMRFPHKSLEGLHDMTLIDGEMIIDTVPDSGLKRRYLAYDLMA
LGAVSKTKLPFSERWKMLEDEIIRPRYYEKNKFESGSKSNPLYKYDMELFSVRRKDFWLLSTVK
KVLKVFIPSLCHDADGLIFQIGLVIDLTNTTRYYSPAEWTKQGTKYAKIACKGRDAVPDNESVN
KFVYEAMIFLDRQKHSKNPKYILVHCTHGHNRTGFMIIHYLMRTHVSCVAEAINMFAQRRPPGI
YKRDYIEALYSFYHEVPENMMIACPPTPEWKRPDDLDLNGEAKQDDDDDNGDPEPPRNESEDKI
ITNDDVLGDEVPYDQQEALRVLCYKLLEMPLIRGHSQFPGSHPVSLNSENLQLLRQRYYYATWK
ADGTRYMMLIMRDGCFLIDRNFCFRRVQMRFPHKSLEGLHDMTLIDGEMIIDTVPDSGLKRRYL
AYDLMALGAVSKTKLPFSERWKMLEDEIIRPRYYEKNKFESGSKSNPLYKYDMELFSVRRKDFW
LLSTVKKVLKVFIPSLCHDADGLIFQIGLVIDLTNTTRYYSPAEWTKQGTKYAKIACKGRDAVP
DNESVNKFVYEAMIFLDRQKHSKNPKYILVHCTHGHNRTGFMIIHYLMRTHVSCVAEAINMFAQ
RRPPGIYKRDYIEALYSFYHEVPENMMIACPPTPEWKRPDDLDLNGEAKQDDDDDNGDPEPPRN
ESEDKIITNDDVLGDEVPYDQQEALRVLCYKLLEMPLIRGHSQFPGSHPVSLNSENLQLLRQRY
YYATWKADGTRYMMLIMRDGCFLIDRNFCFRRVQMRFPHKSLEGLHDMTLIDGEMIIDTVPDSG
LKRRYLAYDLMALGAVSKTKLPFSERWKMLEDEIIRPRYYEKNKFESGSKSNPLYKYDMELFSV
RRKDFWLLSTVKKVLKVFIPSLCHDADGLIFQIGLVIDLTNTTRYYSPAEWTKQGTKYAKIACK
GRDAVPDNESVNKFVYEAMIFLDRQKHSKNPKYILVHCTHGHNRTGFMIIHYLMRTHVSCVAEA
INMFAQRRPPGIYKRDYIEALYSFYHEVPENMMIACPPTPEWKRPDDLDLNGEAKQDDDDDNGD
PEPPRNESEDKIITNDDVLGDEVPYDQQEALRVLCYKLLEMPLIRGHSQFPGSHPVSLNSENLQ
LLRQRYYYATWKADGTRYMMLIMRDGCFLIDRNFCFRRVQMRFPHKSLEGLHDMTLIDGEMIID
TVPDSGLKRRYLAYDLMALGAVSKTKLPFSERWKMLEDEIIRPRYYEKNKFESGSKSNPLYKYD
MELFSVRRKDFWLLSTVKKVLKVFIPSLCHDADGLIFQ(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	13500710-13503557(+)
Potential amino acid sequence	MIFLDRQKHSKNPKYILVHCTHGHNRTGFMIIHYLMRTHVSCVAEAINMFAQRRPPGIYKRDYI EALYSFYHEVPENMMIACPPTPEWKRPDDLDLNGEAKQDDDDDNGDPEPPRNESEDKIITNDDV LGDEVPYDQQEALRVLCYKLLEMPLIRGHSQFPGSHPVSLNSENLQLLRQRYYYATWKADGTRY MMLIMRDGCFLIDRNFCFRRVQMRFPHKSLEGLHDMTLIDGEMIIDTVPDSGLKRRYLAYDLMA LGAVSKTKLPFSERWKMLEDEIIRPRYYEKNKFESGSKSNPLYKYDMELFSVRRKDFWLLSTVK KVLKVFIPSLCHDADGLIFQIGLVIDLTNTTRYYSPAEWTKQGTKYAKIACKGRDAVPDNESVN KFVYEAMIFLDRQKHSKNPKYILVHCTHGHNRTGFMIIHYLMRTHVSCVAEAINMFAQRRPPGI YKRDYIEALYSFYHEVPENMMIACPPTPEWKRPDDLDLNGEAKQDDDDDNGDPEPPRNESEDKI ITNDDVLGDEVPYDQQEALRVLCYKLLEMPLIRGHSQFPGSHPVSLNSENLQLLRQRYYYATWK ADGTRYMMLIMRDGCFLIDRNFCFRRVQMRFPHKSLEGLHDMTLIDGEMIIDTVPDSGLKRRYL AYDLMALGAVSKTKLPFSERWKMLEDEIIRPRYYEKNKFESGSKSNPLYKYDMELFSVRRKDFW LLSTVKKVLKVFIPSLCHDADGLIFQIGLVIDLTNTTRYYSPAEWTKQGTKYAKIACKGRDAVP DNESVNKFVYEAMIFLDRQKHSKNPKYILVHCTHGHNRTGFMIIHYLMRTHVSCVAEAINMFAQ RRPPGIYKRDYIEALYSFYHEVPENMMIACPPTPEWKRPDDLDLNGEAKQDDDDDNGDPEPPRN ESEDKIITNDDVLGDEVPYDQQEALRVLCYKLLEMPLIRGHSQFPGSHPVSLNSENLQLLRQRY YYATWKADGTRYMMLIMRDGCFLIDRNFCFRRVQMRFPHKSLEGLHDMTLIDGEMIIDTVPDSG LKRRYLAYDLMALGAVSKTKLPFSERWKMLEDEIIRPRYYEKNKFESGSKSNPLYKYDMELFSV RRKDFWLLSTVKKVLKVFIPSLCHDADGLIFQIGLVIDLTNTTRYYSPAEWTKQGTKYAKIACK GRDAVPDNESVNKFVYEAMIFLDRQKHSKNPKYILVHCTHGHNRTGFMIIHYLMRTHVSCVAEA INMFAQRRPPGIYKRDYIEALYSFYHEVPENMMIACPPTPEWKRPDDLDLNGEAKQDDDDDNGD PEPPRNESEDKIITNDDVLGDEVPYDQQEALRVLCYKLLEMPLIRGHSQFPGSHPVSLNSENLQ LLRQRYYYATWKADGTRYMMLIMRDGCFLIDRNFCFRRVQMRFPHKSLEGLHDMTLIDGEMIID TVPDSGLKRRYLAYDLMALGAVSKTKLPFSERWKMLEDEIIRPRYYEKNKFESGSKSNPLYKYD MELFSVRRKDFWLLSTVKKVLKVFIPSLCHDADGLIFQ(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d049038_circ_g.4

Address

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