Plant Circular RNA Database

Detail information of Os07g0665700_circ_g.2

			
						 General Information
					
						CircRNA Name
						Os07g0665700_circ_g.2
					
						ID in PlantcircBase
						osa_circ_035200
					
						Alias
						Os07circ19881
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr7: 28102274-28106627  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						SMALT, Segemehl
					
						Parent gene
						
							Os07g0665700						
					
						Parent gene annotation
						
							Peptidase, trypsin-like serine and cysteine domain containing pr
otein. (Os07t0665700-01)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os07g0665250_circ_ag.1 Os07g0665300_circ_ag.1 Os07g0665700_circ_igg.1 Os07g0665700_circ_g.1 Os07g0665700_circ_g.3 Os07g0665700_circ_g.4 Os07g0665700_circ_g.5 						
					
						Support reads
						3
					
						Tissues
						leaf and panicle
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os07t0665750-00:4
Os07t0665750-00:4
Os07t0665700-01:8

General Information
CircRNA Name	Os07g0665700_circ_g.2
ID in PlantcircBase	osa_circ_035200
Alias	Os07circ19881
Organism	Oryza sativa
Position	chr7: 28102274-28106627 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	SMALT, Segemehl
Parent gene	Os07g0665700
Parent gene annotation	Peptidase, trypsin-like serine and cysteine domain containing pr otein. (Os07t0665700-01)
Parent gene strand	-
Alternative splicing	Os07g0665250_circ_ag.1 Os07g0665300_circ_ag.1 Os07g0665700_circ_igg.1 Os07g0665700_circ_g.1 Os07g0665700_circ_g.3 Os07g0665700_circ_g.4 Os07g0665700_circ_g.5
Support reads	3
Tissues	leaf and panicle
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os07t0665750-00:4 Os07t0665750-00:4 Os07t0665700-01:8

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TAATAGTACTCCTTGGCAGGAATGGTGTCCTTTTCTTCGCATAAAAGTTCATGCCAACAAAGTT
CCCATCCAAATCAATAAGAGGCCCTCCAACCCCAGCcttactgattctacaagtggagacctta
agttctttgcagtcaagtttgcttggtttgtcagtcaatatcccacttgtggccattaatttgg
ctgacttg

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTTACTGATTCTACAAGTGGAGACCTTAAGTTCTTTGCAGTCAAGTTTGCTTGGTTTGTCAGTC
AATATCCCACTTGTGGCCATTAATTTGGCTGACTTGAAGACGCGTCCTACAGATAATACCTCCT
TACGCTCAATTAGCCCTGGATCATGAAATTCTTCCGTACGAAGACAACGAAAACCTTTGATGCT
GACAATAGCAACATTGTAATGCAGATGATAATGTTGCAATGTCCCTACAGTTTGTTGTTTGTTT
GGAAGGTGTACAACAATCTGCAGAAGTAATGTGAGGATTTACCGGTATCTCAAATGAATAAGCT
CAAGGAGGACAATACAATACCAACCTTCAAGTTATCATTAATCCTGTTTTCATCATCAGAAATC
CTAACCAAACTTGCTGAAGTCAGAATCCTTGTGTTGGATTCATCGCAGCCTATAAATATTCCTG
TGCAAGCAAAAATCCGTTCTTCGCCTACAAGATCATAATGAATCATAGTTAGTGATATGATATA
AAAAAGAAATGAAAATGCAATGAGATTATAACAATGCGATTACCATTGAATGAAGCAAGAGAGA
CAACAACACGAGACATGTTTGAAGCAACTTTTTTGGTGAGTTTACTCCAGATATCATCAGCAAA
TTCATTTTCAAAAGTATTAACCAAACGCATGCCTCCTGGTTAAAAAAAAGTAGTACCACATATG
AGAGTGCTGTAATACAACTGTCAAAATGTGCAATACAAGGGAGTAATCAACAACAAACTCACCG
TCAAGGACAGCTGGCAAAGGATAACCTTGGGACGTTAGTTCCTTGATTAAAAATTTCCCAAATT
CTGGTAAACAAACTGAAATGATTAATCATCATGTGTTAACAATGACAGCAAAATTAGAAACAAT
GACTCACCATCACCATCAGCAACTGGCAAGAAAGGGGAGGCCGTCTCCATAAAAAATGGATCAT
TCTCAATTGGGTTTTCTAGAGAAAAAAAGGTGTAGGCGATTAATGACCATGTGTTAGTAATGAT
CAATAATTAGTGTTGAAACATGATGACAACTTTTGCATGATATGTCATATTAGTGACCTAGCCT
GATTCACCTTCTGAATCACTAGAAGAAGACGACTCCTGCTCATTCTCAGGTTTCCTACTGGAGT
TACCTAAAATGGAAAAGATGAGAGGAATGAGCAGATTGGACAAACTGAAATCCTTGGGTAAAGG
ACACAATACTAGATTTTCATGCAGAACATCCATGTATGTTAGTACAGACAGGTAAAAGCATAAA
ATCAATCTTGCACAAATGCTGACAAACCTACAAATGATGAATAGTTTAAAATAAATGATAATGA
TCTGCTTGACAGGCGACATCACAGTTTAGTAGTCTTTAGGAGTTTTTGCACACTTACGTAACTC
AAAAGAGTCCGAACATCCTTCCAAGCCTTCCAAATAGGACTTGGAGGTTGCAGGAGATTCTTGT
ATCTCATTTGTGCTCCTTCCAGTTGTGCTATCAAGTTTCTTAAGCTCACCCCTGCAGTATAACA
CAGTAAATTCATCAAGAGTAGTTACCAAAGAAAAGGTGGAATGGATAAGGACAATTGGCATTCT
ATATTCCTTTTGTAGCGAATGATATGGTCAGTGATGTCATTCAAAGATTCATAACTAAGGGTAA
AAGATTTATCAACCACCGTATGATAACAGATAATACAGTTAGCATGGTTAAAAGAGCTAACAAT
CCTGTGCAGGGTAGGTTGTGGGTTAGTCTCCCCACTTATGCAACCTGAGGTTTACTTTTTGGAA
AACTGCATATTGGAGTAACATTTCAAGAAAAAAATAAAGTGGTGAGGATCCCTGACATCCCTGA
AAGCACGCAGCCATGGACATATAGCCTCTGCAAGAGCAGTTGAGCGCTATGTGCCTATGTTTCT
CTTCCCTCTGAATCCATTATTCAAATTAGGCATATCTTTTTGTTTTGGCCTCAATATCTTTTAC
CAGGCACCACAAACAATAACCAGTGACCAGCAAATAACAGTCAAATTGGACCAAAATGTTTTCT
CCAAGATCTATGCATGAATGCTTATTTTCTCGAAAACACAGGAGAACTGCGCTCATTACAAATG
AAATATATAGACAACGGAAGGATCCAAAGGACCCTCCCATAACACCACCCCCCCCTCCCCAAAA
TAAATAAATAAATAAATAAATGTGGTACACGACTAGAACACCCCGCGACGACTAGCTAGCCATC
CAAGGCGAGAGACCTTATGCATGAATGTGAAAGAGCTATGCAAACAATAGGAGCAATACAAAAA
AAAAATGTGAGTATTAACTATCTCATAGAAACAGACAAATTTGAGAAAATATAATATTAAACCT
GCAAGGAAACCTTGATTATTATTTGCTTCAACATGGTCACAGTAGTCCAAATCTAGTACAAGGC
AACTGTAATACATGCTTGACAGTACAGGTGGTCTAGATGGAAATGGTACTTATTTAGCTAGAGA
TGTGAGAAGCAACCAAATTGTTGTCAAGGATGCTCTCTGATGCATATAAATTAACAAACATAAC
AGCCAGTGAGCTCGGATATTTGGGTAGATCAAAAGTGTTTTTGCCACTCAAAAAAATGATGTGC
CTTATCTATATTTATCACAAATACGTGTTGAATTGGAATTTGGACAACTGTAGTCTTATCAAAA
TATAACTTGACCACTAATTTCTATTGTAATTGTAATATATTTTAATATCCAATAAATTTGTAAT
AGTATGTCATGGCCAAGCAACGGCCGAAGGTTATATGGGTGGAAGGACGGAGGCTGCGGCCTCC
GCTGTCGTGGTTGGTGAGGCTCGGTGGTGGTTCTATATAGAAGAAAGAGAATAGGAGAACGGCA
GACAAAGGAGATTGGAGATTTATTATTTTCTTCGTTGCCATCACAGTTCGATTACATCTCCTTA
TATAGCCTTAATTCTCTAACAAACTCAATCTAACTTGATCCTGATTTAACTCAATCTTTAACTG
ACCTTAACCTGATTTATCTCTAAGATTACATTAACAAAACTCATCTGTAAAATAAAAGTACTTT
TTGACACGGATCTGTGCATATGATTTTTAACTATATCCACCTAAATACTTAAAAATTATTGACA
CTTGAGTTTCAAAAGTTTGACCAGAGATATATCCATGATCCTTTGAGGCTCTGAGCTACTGCTC
TTTACTTCATTTCATACTAGCTAAATGCCCGTGCTTTGCTACGGATAAAAGGAAAAGATATCAT
AATATTGCCTAAAATAAATAAAAGCATTTTTTTCAACAATATGTTACCCACCTTTTCACTACAA
GGAGTATTCACCTCAATTTAATTTTATATATGGCTATCCATTTAGATCTACTTGTTATGTAATA
TATTAAGAAGTTCAAGGGGTAATGTGTAAAAACTATAATTGGAGTAGGTGGGGTGGCATATTCA
CCGCCACCACCATTGGAGTCTTTCTAAAGGAGTATAGATGTTTACTGATCGGTGTTCGGTTGCA
TAGAATTTCTGCCTTGAACTACTAGTTCACTGTTAGCACAAAGGATCTATGATCATCCAGAAGA
TCTTTTGGATAAACTAACTGCTCTGTTTCCATCTAGCACAAAATATCGAACCAAAAGCTATTCT
GGGACTAACCACTTTGCTAGTACTTGTACTCATTTTTCTAAGTAGCCCAATAACTGGGTGCATT
CTTCACAGAAAAGTCAACTTATAGTCTTATAGAATTTTACTAGCTTTTCTTGTGTAACAAAGGC
TCTATATGATTTATAGGGAACTTATAACAAAGTCAACTTATAGGAAAGTCAGCATTTAATCATT
ATGATTTACCTCTCAGGAACATGCATGTCCTTTTTTTTACAGAATTAATGAGACTCTGACAGTA
CGGGCTCAGCCAGTTGTTTATAAATGTACTCTGTATGACTGTGCCAACGTTTAAAACATGAGGC
TTATAGATCAGTATGGCCATTTTAAAATTTATAAATGTACTCTGTGTGGCTGTGCCAACATTTA
AAACATGAGGCTTATAGTTCAGTCTGACCATTTTAAAAGTTAACACTAAGTGCAGTCCTAATTT
AACTTTTCTTTTACAAAAAAGTATTCCATGTGCGCTGCATACCAAATGTCTAAGTATAAAATAG
CGATGTATAGGAAAGTAGAGGCTAGCGAAACGAGAAACCATATAGCTGACAGTAAAAACTTACC
GGTATGTCTTGAAATTAGCCATGCATTCGGTAATAGTACTCCTTGGCAGGAATGGTGTCCTTTT
CTTCGCATAAAAGTTCATGCCAACAAAGTTCCCATCCAAATCAATAAGAGGCCCTCCAACCCCA
GC
						
					

			
		

Sequences
Splice junction sequence	TAATAGTACTCCTTGGCAGGAATGGTGTCCTTTTCTTCGCATAAAAGTTCATGCCAACAAAGTT CCCATCCAAATCAATAAGAGGCCCTCCAACCCCAGCcttactgattctacaagtggagacctta agttctttgcagtcaagtttgcttggtttgtcagtcaatatcccacttgtggccattaatttgg ctgacttg
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTTACTGATTCTACAAGTGGAGACCTTAAGTTCTTTGCAGTCAAGTTTGCTTGGTTTGTCAGTC AATATCCCACTTGTGGCCATTAATTTGGCTGACTTGAAGACGCGTCCTACAGATAATACCTCCT TACGCTCAATTAGCCCTGGATCATGAAATTCTTCCGTACGAAGACAACGAAAACCTTTGATGCT GACAATAGCAACATTGTAATGCAGATGATAATGTTGCAATGTCCCTACAGTTTGTTGTTTGTTT GGAAGGTGTACAACAATCTGCAGAAGTAATGTGAGGATTTACCGGTATCTCAAATGAATAAGCT CAAGGAGGACAATACAATACCAACCTTCAAGTTATCATTAATCCTGTTTTCATCATCAGAAATC CTAACCAAACTTGCTGAAGTCAGAATCCTTGTGTTGGATTCATCGCAGCCTATAAATATTCCTG TGCAAGCAAAAATCCGTTCTTCGCCTACAAGATCATAATGAATCATAGTTAGTGATATGATATA AAAAAGAAATGAAAATGCAATGAGATTATAACAATGCGATTACCATTGAATGAAGCAAGAGAGA CAACAACACGAGACATGTTTGAAGCAACTTTTTTGGTGAGTTTACTCCAGATATCATCAGCAAA TTCATTTTCAAAAGTATTAACCAAACGCATGCCTCCTGGTTAAAAAAAAGTAGTACCACATATG AGAGTGCTGTAATACAACTGTCAAAATGTGCAATACAAGGGAGTAATCAACAACAAACTCACCG TCAAGGACAGCTGGCAAAGGATAACCTTGGGACGTTAGTTCCTTGATTAAAAATTTCCCAAATT CTGGTAAACAAACTGAAATGATTAATCATCATGTGTTAACAATGACAGCAAAATTAGAAACAAT GACTCACCATCACCATCAGCAACTGGCAAGAAAGGGGAGGCCGTCTCCATAAAAAATGGATCAT TCTCAATTGGGTTTTCTAGAGAAAAAAAGGTGTAGGCGATTAATGACCATGTGTTAGTAATGAT CAATAATTAGTGTTGAAACATGATGACAACTTTTGCATGATATGTCATATTAGTGACCTAGCCT GATTCACCTTCTGAATCACTAGAAGAAGACGACTCCTGCTCATTCTCAGGTTTCCTACTGGAGT TACCTAAAATGGAAAAGATGAGAGGAATGAGCAGATTGGACAAACTGAAATCCTTGGGTAAAGG ACACAATACTAGATTTTCATGCAGAACATCCATGTATGTTAGTACAGACAGGTAAAAGCATAAA ATCAATCTTGCACAAATGCTGACAAACCTACAAATGATGAATAGTTTAAAATAAATGATAATGA TCTGCTTGACAGGCGACATCACAGTTTAGTAGTCTTTAGGAGTTTTTGCACACTTACGTAACTC AAAAGAGTCCGAACATCCTTCCAAGCCTTCCAAATAGGACTTGGAGGTTGCAGGAGATTCTTGT ATCTCATTTGTGCTCCTTCCAGTTGTGCTATCAAGTTTCTTAAGCTCACCCCTGCAGTATAACA CAGTAAATTCATCAAGAGTAGTTACCAAAGAAAAGGTGGAATGGATAAGGACAATTGGCATTCT ATATTCCTTTTGTAGCGAATGATATGGTCAGTGATGTCATTCAAAGATTCATAACTAAGGGTAA AAGATTTATCAACCACCGTATGATAACAGATAATACAGTTAGCATGGTTAAAAGAGCTAACAAT CCTGTGCAGGGTAGGTTGTGGGTTAGTCTCCCCACTTATGCAACCTGAGGTTTACTTTTTGGAA AACTGCATATTGGAGTAACATTTCAAGAAAAAAATAAAGTGGTGAGGATCCCTGACATCCCTGA AAGCACGCAGCCATGGACATATAGCCTCTGCAAGAGCAGTTGAGCGCTATGTGCCTATGTTTCT CTTCCCTCTGAATCCATTATTCAAATTAGGCATATCTTTTTGTTTTGGCCTCAATATCTTTTAC CAGGCACCACAAACAATAACCAGTGACCAGCAAATAACAGTCAAATTGGACCAAAATGTTTTCT CCAAGATCTATGCATGAATGCTTATTTTCTCGAAAACACAGGAGAACTGCGCTCATTACAAATG AAATATATAGACAACGGAAGGATCCAAAGGACCCTCCCATAACACCACCCCCCCCTCCCCAAAA TAAATAAATAAATAAATAAATGTGGTACACGACTAGAACACCCCGCGACGACTAGCTAGCCATC CAAGGCGAGAGACCTTATGCATGAATGTGAAAGAGCTATGCAAACAATAGGAGCAATACAAAAA AAAAATGTGAGTATTAACTATCTCATAGAAACAGACAAATTTGAGAAAATATAATATTAAACCT GCAAGGAAACCTTGATTATTATTTGCTTCAACATGGTCACAGTAGTCCAAATCTAGTACAAGGC AACTGTAATACATGCTTGACAGTACAGGTGGTCTAGATGGAAATGGTACTTATTTAGCTAGAGA TGTGAGAAGCAACCAAATTGTTGTCAAGGATGCTCTCTGATGCATATAAATTAACAAACATAAC AGCCAGTGAGCTCGGATATTTGGGTAGATCAAAAGTGTTTTTGCCACTCAAAAAAATGATGTGC CTTATCTATATTTATCACAAATACGTGTTGAATTGGAATTTGGACAACTGTAGTCTTATCAAAA TATAACTTGACCACTAATTTCTATTGTAATTGTAATATATTTTAATATCCAATAAATTTGTAAT AGTATGTCATGGCCAAGCAACGGCCGAAGGTTATATGGGTGGAAGGACGGAGGCTGCGGCCTCC GCTGTCGTGGTTGGTGAGGCTCGGTGGTGGTTCTATATAGAAGAAAGAGAATAGGAGAACGGCA GACAAAGGAGATTGGAGATTTATTATTTTCTTCGTTGCCATCACAGTTCGATTACATCTCCTTA TATAGCCTTAATTCTCTAACAAACTCAATCTAACTTGATCCTGATTTAACTCAATCTTTAACTG ACCTTAACCTGATTTATCTCTAAGATTACATTAACAAAACTCATCTGTAAAATAAAAGTACTTT TTGACACGGATCTGTGCATATGATTTTTAACTATATCCACCTAAATACTTAAAAATTATTGACA CTTGAGTTTCAAAAGTTTGACCAGAGATATATCCATGATCCTTTGAGGCTCTGAGCTACTGCTC TTTACTTCATTTCATACTAGCTAAATGCCCGTGCTTTGCTACGGATAAAAGGAAAAGATATCAT AATATTGCCTAAAATAAATAAAAGCATTTTTTTCAACAATATGTTACCCACCTTTTCACTACAA GGAGTATTCACCTCAATTTAATTTTATATATGGCTATCCATTTAGATCTACTTGTTATGTAATA TATTAAGAAGTTCAAGGGGTAATGTGTAAAAACTATAATTGGAGTAGGTGGGGTGGCATATTCA CCGCCACCACCATTGGAGTCTTTCTAAAGGAGTATAGATGTTTACTGATCGGTGTTCGGTTGCA TAGAATTTCTGCCTTGAACTACTAGTTCACTGTTAGCACAAAGGATCTATGATCATCCAGAAGA TCTTTTGGATAAACTAACTGCTCTGTTTCCATCTAGCACAAAATATCGAACCAAAAGCTATTCT GGGACTAACCACTTTGCTAGTACTTGTACTCATTTTTCTAAGTAGCCCAATAACTGGGTGCATT CTTCACAGAAAAGTCAACTTATAGTCTTATAGAATTTTACTAGCTTTTCTTGTGTAACAAAGGC TCTATATGATTTATAGGGAACTTATAACAAAGTCAACTTATAGGAAAGTCAGCATTTAATCATT ATGATTTACCTCTCAGGAACATGCATGTCCTTTTTTTTACAGAATTAATGAGACTCTGACAGTA CGGGCTCAGCCAGTTGTTTATAAATGTACTCTGTATGACTGTGCCAACGTTTAAAACATGAGGC TTATAGATCAGTATGGCCATTTTAAAATTTATAAATGTACTCTGTGTGGCTGTGCCAACATTTA AAACATGAGGCTTATAGTTCAGTCTGACCATTTTAAAAGTTAACACTAAGTGCAGTCCTAATTT AACTTTTCTTTTACAAAAAAGTATTCCATGTGCGCTGCATACCAAATGTCTAAGTATAAAATAG CGATGTATAGGAAAGTAGAGGCTAGCGAAACGAGAAACCATATAGCTGACAGTAAAAACTTACC GGTATGTCTTGAAATTAGCCATGCATTCGGTAATAGTACTCCTTGGCAGGAATGGTGTCCTTTT CTTCGCATAAAAGTTCATGCCAACAAAGTTCCCATCCAAATCAATAAGAGGCCCTCCAACCCCA GC

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_017452 osi_circ_016426 						
					
						PMCS
						0.660516265

Conservation Information
Conserved circRNAs	osi_circ_017452 osi_circ_016426
PMCS	0.660516265

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							28106579-28102424(+)
28106581-28102276(-)
						
					

						Potential amino acid sequence
						
							MPTKFPSKSIRGPPTPALLILQVETLSSLQSSLLGLSVNIPLVAINLADLKTRPTDNTSLRSIS
PGS*(+)
MNFYAKKRTPFLPRSTITECMANFKTYRGELKKLDSTTGRSTNEIQESPATSKSYLEGLEGCSD
SFELRNSSRKPENEQESSSSSDSEENPIENDPFFMETASPFLPVADGDEFGKFLIKELTSQGYP
LPAVLDGGMRLVNTFENEFADDIWSKLTKKVASNMSRVVVSLASFNGEERIFACTGIFIGCDES
NTRILTSASLVRISDDENRINDNLKIVVHLPNKQQTVGTLQHYHLHYNVAIVSIKGFRCLRTEE
FHDPGLIERKEVLSVGRVFKSAKLMATSGILTDKPSKLDCKELKVSTCRISKAGVGGPLIDLDG
NFVGMNFYAKKRTPFLPRSTITECMANFKTYRGELKKLDSTTGRSTNEIQESPATSKSYLEGLE
GCSDSFELRNSSRKPENEQESSSSSDSEENPIENDPFFMETASPFLPVADGDEFGKFLIKELTS
QGYPLPAVLDGGMRLVNTFENEFADDIWSKLTKKVASNMSRVVVSLASFNGEERIFACTGIFIG
CDESNTRILTSASLVRISDDENRINDNLKIVVHLPNKQQTVGTLQHYHLHYNVAIVSIKGFRCL
RTEEFHDPGLIERKEVLSVGRVFKSAKLMATSGILTDKPSKLDCKELKVSTCRISKAGVGGPLI
DLDGNFVGMNFYAKKRTPFLPRSTITECMANFKTYRGELKKLDSTTGRSTNEIQESPATSKSYL
EGLEGCSDSFELRNSSRKPENEQESSSSSDSEENPIENDPFFMETASPFLPVADGDEFGKFLIK
ELTSQGYPLPAVLDGGMRLVNTFENEFADDIWSKLTKKVASNMSRVVVSLASFNGEERIFACTG
IFIGCDESNTRILTSASLVRISDDENRINDNLKIVVHLPNKQQTVGTLQHYHLHYNVAIVSIKG
FRCLRTEEFHDPGLIERKEVLSVGRVFKSAKLMATSGILTDKPSKLDCKELKVSTCRISKAGVG
GPLIDLDGNFVGMNFYAKKRTPFLPRSTITECMANFKTYRGELKKLDSTTGRSTNEIQESPATS
KSYLEGLEGCSDSFELRNSSRKPENEQESSSSSDSEENPIENDPFFMETASPFLPVADGDEFGK
FLIKELTSQGYPLPAVLDGGMRLVNTFENEFADDIWSKLTKKVASNMSRVVVSLASFNGEERIF
ACTGIFIGCDESNTRILTSASLVRISDDENRINDNLKIVVHLPNKQQTVGTLQHYHLHYNVAIV
SIKGFRCLRTEEFHDPGLIERKEVLSVGRVFKSAKLMATSGILTDKPSKLDCKELKVSTCRISK
(-)
						
					

						Sponge-miRNAs
						
							osa-miR1854-3p 						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	28106579-28102424(+) 28106581-28102276(-)
Potential amino acid sequence	MPTKFPSKSIRGPPTPALLILQVETLSSLQSSLLGLSVNIPLVAINLADLKTRPTDNTSLRSIS PGS*(+) MNFYAKKRTPFLPRSTITECMANFKTYRGELKKLDSTTGRSTNEIQESPATSKSYLEGLEGCSD SFELRNSSRKPENEQESSSSSDSEENPIENDPFFMETASPFLPVADGDEFGKFLIKELTSQGYP LPAVLDGGMRLVNTFENEFADDIWSKLTKKVASNMSRVVVSLASFNGEERIFACTGIFIGCDES NTRILTSASLVRISDDENRINDNLKIVVHLPNKQQTVGTLQHYHLHYNVAIVSIKGFRCLRTEE FHDPGLIERKEVLSVGRVFKSAKLMATSGILTDKPSKLDCKELKVSTCRISKAGVGGPLIDLDG NFVGMNFYAKKRTPFLPRSTITECMANFKTYRGELKKLDSTTGRSTNEIQESPATSKSYLEGLE GCSDSFELRNSSRKPENEQESSSSSDSEENPIENDPFFMETASPFLPVADGDEFGKFLIKELTS QGYPLPAVLDGGMRLVNTFENEFADDIWSKLTKKVASNMSRVVVSLASFNGEERIFACTGIFIG CDESNTRILTSASLVRISDDENRINDNLKIVVHLPNKQQTVGTLQHYHLHYNVAIVSIKGFRCL RTEEFHDPGLIERKEVLSVGRVFKSAKLMATSGILTDKPSKLDCKELKVSTCRISKAGVGGPLI DLDGNFVGMNFYAKKRTPFLPRSTITECMANFKTYRGELKKLDSTTGRSTNEIQESPATSKSYL EGLEGCSDSFELRNSSRKPENEQESSSSSDSEENPIENDPFFMETASPFLPVADGDEFGKFLIK ELTSQGYPLPAVLDGGMRLVNTFENEFADDIWSKLTKKVASNMSRVVVSLASFNGEERIFACTG IFIGCDESNTRILTSASLVRISDDENRINDNLKIVVHLPNKQQTVGTLQHYHLHYNVAIVSIKG FRCLRTEEFHDPGLIERKEVLSVGRVFKSAKLMATSGILTDKPSKLDCKELKVSTCRISKAGVG GPLIDLDGNFVGMNFYAKKRTPFLPRSTITECMANFKTYRGELKKLDSTTGRSTNEIQESPATS KSYLEGLEGCSDSFELRNSSRKPENEQESSSSSDSEENPIENDPFFMETASPFLPVADGDEFGK FLIKELTSQGYPLPAVLDGGMRLVNTFENEFADDIWSKLTKKVASNMSRVVVSLASFNGEERIF ACTGIFIGCDESNTRILTSASLVRISDDENRINDNLKIVVHLPNKQQTVGTLQHYHLHYNVAIV SIKGFRCLRTEEFHDPGLIERKEVLSVGRVFKSAKLMATSGILTDKPSKLDCKELKVSTCRISK (-)
Sponge-miRNAs	osa-miR1854-3p
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Lu et al., 2015

circRNA

Detail information of Os07g0665700_circ_g.2

Address

Any questions?

Supported by