Splice junction sequence |
AGCATGCTTATCAGAGTGCCTTGGTCCAAAATGAGGAATTATGTAAGAAACTTGAAGAAGCTGG AAGAAAAATAGATCAGCTCCAAGATTCTGTTCAGAGgcgaaattgcccgggcagtgcacaagaa actgagaatagaagctgcagctctaagagtccagaagaatttccgccggtacgttgacaggaaa tcttttgt
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 784 Transcript exons: 6045145-6045350,6045464-6045583,6045681-6045779,6045899- 6046117,6046319-6046458 GCGAAATTGCCCGGGCAGTGCACAAGAAACTGAGAATAGAAGCTGCAGCTCTAAGAGTCCAGAA GAATTTCCGCCGGTACGTTGACAGGAAATCTTTTGTCACCACAAGATCATCTACAATCGTGTTG CAGACTGGCTTAAGGGCCATGATTGCACGTAGTGAATTCAGGCTAAGAAGGCAAAGAAAAGCCG CCATTGTACTTCAGGCTCATTGGCGTGGTCGCCAAGCATTCTCATATTACACAAGACTTCAGAA GGCGGCAATAGTCACACAATGTGCCTGGAGATGCAGACTTGCTAGAAGAGAGCTTAGAATGCTG AAAATGGCTGCAAGAGACACCGGTGCTCTTAAAGATGCTAAGAATAAATTGGAGCAGCGGGTAG AAGAGCTTTCCTTGCGTTTGCATTTGGAGAAGCGGTTAAGGACTGATCTTGAGGAGGCAAAGGT GCAAGAAGTTGCAAAGCTGCAAGAGGCATTGCATACCATGCGGTTACAATTGAAAGAAACTACT GCAATGGTCGTAAAGGAACAGGAGGCGGCTCGAGTAGCAATTGAAGAAGCAAGTTCAGTTAATA AGGAACCTGTTGTTGTTGAAGATACAGAGAAGATCGATTCTTTGAGCAACGAAATTGACAGGCT AAAGGGACTGTTGTCATCAGAAACACATAAGGCAGATGAAGCACAGCATGCTTATCAGAGTGCC TTGGTCCAAAATGAGGAATTATGTAAGAAACTTGAAGAAGCTGGAAGAAAAATAGATCAGCTCC AAGATTCTGTTCAGAG
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Genomic sequence |
GCGAAATTGCCCGGGCAGTGCACAAGAAACTGAGAATAGAAGCTGCAGCTCTAAGAGTCCAGAA GAATTTCCGCCGGTACGTTGACAGGAAATCTTTTGTCACCACAAGATCATCTACAATCGTGTTG CAGACTGGCTTAAGGGCCATGATTGCACGTAGTGAATTCAGGCTAAGAAGGCAAAGAAAAGCCG CCATTGTACTTCAGGTAGATCACAGTTTCCTTGTTACTGGGAGGGAACTAGACAACCTTCTTAG GACAGAAATAGGAAAACTTTGTTAACTGTTCTCTTTGATGGATAAAAAATTCCCCTTTTTCAGG CTCATTGGCGTGGTCGCCAAGCATTCTCATATTACACAAGACTTCAGAAGGCGGCAATAGTCAC ACAATGTGCCTGGAGATGCAGACTTGCTAGAAGAGAGCTTAGAATGCTGAAAATGGTTGGATTC CTTGCTTTATGACTTTTCATTGCGTTCTAACACAGTGTGCATGAATTTTCTTATTCAGCTGTTT ACTTCCATATGTACATTGATGTAGGCTGCAAGAGACACCGGTGCTCTTAAAGATGCTAAGAATA AATTGGAGCAGCGGGTAGAAGAGCTTTCCTTGCGTTTGCATTTGGAGAAGCGGTTAAGGGTAAC TTAGATGTCAATTTTCTTTGGAAATATCTTTAGGTTAAACCAATTTGGAGATTGTGGTCTTCAA AGTCAGTTGCAAATTTTGGATTATATTGTTATCTTTTTACTGATAAACAGACTGATCTTGAGGA GGCAAAGGTGCAAGAAGTTGCAAAGCTGCAAGAGGCATTGCATACCATGCGGTTACAATTGAAA GAAACTACTGCAATGGTCGTAAAGGAACAGGAGGCGGCTCGAGTAGCAATTGAAGAAGCAAGTT CAGTTAATAAGGAACCTGTTGTTGTTGAAGATACAGAGAAGATCGATTCTTTGAGCAACGAAAT TGACAGGCTAAAGGTAAAAACTGACATATTTTAATCCAAATAAAATAGGTTCAAGATGACAAGA TGTAATTGTTTCTACACCATAGATGTGTAAATTTAATAATGAGATTTTTTTCTGTTTCTGGATT TAAAAAAGATAATGCTTTATGTGAAAGTCTCCATTATTTGATTGTTCATGCCACTGATCTACAA TCTCGACATGGTCCTAATGCAGGGACTGTTGTCATCAGAAACACATAAGGCAGATGAAGCACAG CATGCTTATCAGAGTGCCTTGGTCCAAAATGAGGAATTATGTAAGAAACTTGAAGAAGCTGGAA GAAAAATAGATCAGCTCCAAGATTCTGTTCAGAG |