Plant Circular RNA Database

Detail information of Os11g0521900_circ_g.1

			
						 General Information
					
						CircRNA Name
						Os11g0521900_circ_g.1
					
						ID in PlantcircBase
						osa_circ_009431
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr11: 18743078-18745762  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os11g0521900						
					
						Parent gene annotation
						
							Similar to NLI interacting factor-like phosphatase family protei
n, expressed. (Os11t0521900-01);Similar to NLI interacting facto
r-like phosphatase family protein, expressed. (Os11t0521900-02);
Similar to NLI interacting factor-like phosphatase family protei
n, expressed. (Os11t0521900-03)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os11g0521900_circ_g.2 Os11g0521900_circ_g.3 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os11t0521900-02:3
Os11t0521900-03:2
Os11t0521900-01:3

General Information
CircRNA Name	Os11g0521900_circ_g.1
ID in PlantcircBase	osa_circ_009431
Alias	NA
Organism	Oryza sativa
Position	chr11: 18743078-18745762 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os11g0521900
Parent gene annotation	Similar to NLI interacting factor-like phosphatase family protei n, expressed. (Os11t0521900-01);Similar to NLI interacting facto r-like phosphatase family protein, expressed. (Os11t0521900-02); Similar to NLI interacting factor-like phosphatase family protei n, expressed. (Os11t0521900-03)
Parent gene strand	-
Alternative splicing	Os11g0521900_circ_g.2 Os11g0521900_circ_g.3
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os11t0521900-02:3 Os11t0521900-03:2 Os11t0521900-01:3

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGGCAGACTCTAAAACCACAAAGTACAAGGTTTACAAACCTCATCTCGTTGGTCAGGTGTTAGC
ATGTCTGAATATCTGTTTTTTATGTGGAATAACAACctttgcagaattgaggagcgtgtgatcc
aaatcaagcaccaagcaaagtttccgtgctgcaaacatcttgtgttgttccttgatccgccttg
ccctttcc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 2062
Transcript exons: 18743078-18743689,18744218-18745606,18745702-18745762
CTTTGCAGAATTGAGGAGCGTGTGATCCAAATCAAGCACCAAGCAAAGTTTCCGTGCTGCAAAC
ATCTTGTGTTGTTCCTTGATCCGCCTTGCCCTTTCCTTCTGAATGAGAGCCTTCTGCTGATCAT
CATAACCATCAAGGAGATGATCAACATCTCCATATGGGCTAGCAGGCGGCACAGCATCAGGTGC
TGTTACAGGACCAGTACTTGTTGCAGCATCATCATTAGATTCATTCTGTCCAGCAGCTAATCTT
GGATCTGCCTTATTTACACTACTTGAAGTTTGCTTTGTATTGCCATGAGGAGGCATAAGTGCTG
TAGCAGCTAACTGTGAATTTGAGACAGGATTTGCATTCATGGTGACTGGCCGTGCTGATGATGT
AACAGGTAGAGAAGGCAATGCAATAGCCTGAAGTTGCTCTGCCTTTTGGTCTTGGTTGAGCAAA
TGGTCCTTGCTGCTCTGAGAGTCTGGCGGAGCAGTTCCATTGCTTTTGGCTTGCTCAACACCAA
CTGGAGGAACTGTATCGTTCTTCTGCACTATGTTACTATGGAGTATGCGACGAGGATCACGTGG
TTTCATACGTATAACTCCAGTATCATTTTGTGAGTGCATGGGAGCTGACTGCATTGGAACTTGT
GGTCTAACAGAAGGGACTGCTGCAACTTCTGTGGTCTTTGGAGCATTGCCAAGTGGTAAAACCA
TGCCAGGAGTTACATTACTAGTCATGCCAACAGAAGCAGTTACCTTCTGCTGAGGTTCTGATGC
TGACATCTTCTGCTGTTCCATTTGAATCCATTGCATGAGCATTGTTGGATTGACAGCAATGTCT
TTTAACATAGCAGGCAATGAAACAGCAGGAGCAGAACTGGTTTGCGGAGCTGAATTAGTTTGGG
GTGCTTGTACAATTCCAGGACTAGTTCCACTATTATTTGTCGTATTATTTAAGTTACTAGCAAG
TGTACTATCTGTCCTGATATTATGATTTCCAGTTGTGTTATTTCCAAGTCTTGTATTTTGATTT
GGCTGAAACCCATCACTAGAATATGAGCTAATATTACCTCCATCTTTAGCCCACCCACCTCGAC
CTGTAGGTTGCATATCTCTCAGGTTGCCAATGACACCCCTAGATCTTTTTAACGCGTTCTCATC
CACCATAGGTTCATCAACTGCCTTATTCTTACGGCTATTGATTGATACTCCACCACCCATGGTC
CTATCTTTAGAAGGATTTGGTTCTGCAAAATTCACACGTCGGTTTGCATCTGCAACACCACCAG
TATCACGATTTAAAAACTTAAGCCTTGGATCTCTACTTTTAGCTGTAGCTTTTAGCAGGTGGTT
GGATCCTGAAACAGAGTTTTCAATCTGTTTAGCATAACCTGGTGGACCACCTGCAAAACTGTCA
CTGTTGCTGCTAACTGTGCTAGGTCGAGAGGGCATCTGATTCACAATTGGCAACGCAATCTTGT
TTGAAGCAGAAAAGCTCGAAACTTCACCAAATACATCACCCCCTTTGTCTCCAGATTTATCTCC
ATCACCAGAAGGAGTTGGACTTGGTAGATCATCGCTTGCAAAGTTAGACTTCTGCCCATGCTTC
TGTTGGTAATAGCAAACAGCCTTCAGTGCATCGTTAAAGGATTGATACGAAGAATTCTTCGCAG
GCTCAACTCTTTCTAGAACCGATGGTCTGTCAGGTGCCATTGGAAGTGCTCCATATCCAATGGG
CTTTGGCACATCAAAAGGTGGTTTACTATCTCGAGTTGGTGAGGGTAAGCTGTTTTCGTCATAA
TCTGCATGAAGATCCAACAAGGGGCTAACCATTCTATTCTTTGCTGGTATTTCAACCTTGCTAA
ATGAATTTCCTGCTCCTGATTCAAATGGTAGTCTCTCTGATAAAACCTGACCAGATGGAGCTGC
AGCATTAGTTGAAGTGGCATTTGGACCATTTGCATTGTCTTTTCCATCCTCAAACACTAACTGC
CTCACACGGCTATCCAGCTCATCTCGTTGGTCAGGTGTTAGCATGTCTGAATATCTGTTTTTTA
TGTGGAATAACAAC
						
					

						Genomic sequence
						
							CTTTGCAGAATTGAGGAGCGTGTGATCCAAATCAAGCACCAAGCAAAGTTTCCGTGCTGCAAAC
ATCTTGTGTTGTTCCTTGATCCGCCTTGCCCTTTCCTTCTGAATGAGAGCCTTCTGCTGATCAT
CATAACCATCAAGGAGATGATCAACATCTCCATATGGGCTAGCAGGCGGCACAGCATCAGGTGC
TGTTACAGGACCAGTACTTGTTGCAGCATCATCATTAGATTCATTCTGTCCAGCAGCTAATCTT
GGATCTGCCTTATTTACACTACTTGAAGTTTGCTTTGTATTGCCATGAGGAGGCATAAGTGCTG
TAGCAGCTAACTGTGAATTTGAGACAGGATTTGCATTCATGGTGACTGGCCGTGCTGATGATGT
AACAGGTAGAGAAGGCAATGCAATAGCCTGAAGTTGCTCTGCCTTTTGGTCTTGGTTGAGCAAA
TGGTCCTTGCTGCTCTGAGAGTCTGGCGGAGCAGTTCCATTGCTTTTGGCTTGCTCAACACCAA
CTGGAGGAACTGTATCGTTCTTCTGCACTATGTTACTATGGAGTATGCGACGAGGATCACGTGG
TTTCATACGTATAACTCCAGTATCATTTTGTGAGTGCTACACAAAAAAGCATTTTTAAACATAA
TATTAGTACGAGATCCTAAATATTATAACAAAAGGATTTGGAATTGGCATTAGTAACACGGTGG
TTCACCGTGGTATGACGCACAAGCTAATACGACCTACTCATAATAAAAACTTAGTTTTACCTCA
TTTATGTCCCTTGATATGCATATAATATATATACTTCTATAAAAAGAGTTGGCAATAATGCAAT
ATGATCACTGTCTCCACACAACAAATTGAGTTGGTGGATTCTGTTAATGGATTTTTGCGTGGGC
ATCTCAAAAGTTCTCCATGACTCATTGACGAGACAAAAACTATGCATGCAAGTGTTTAATATAA
ACTTTGTGGATGCAGTTTTTTCTAACTTATGGCATGTTTATTTGAGATCTTTTGCAAACTTGCA
AAGCACATGCCATTAACATCATATGGTATATAAAATTGTATTTGAACCCATTAGGAAGCAAACA
GATAAATTGTAAGTACAAACAGAAAACACAGGTGCACTAGTAAGAGAGTTACCATGGGAGCTGA
CTGCATTGGAACTTGTGGTCTAACAGAAGGGACTGCTGCAACTTCTGTGGTCTTTGGAGCATTG
CCAAGTGGTAAAACCATGCCAGGAGTTACATTACTAGTCATGCCAACAGAAGCAGTTACCTTCT
GCTGAGGTTCTGATGCTGACATCTTCTGCTGTTCCATTTGAATCCATTGCATGAGCATTGTTGG
ATTGACAGCAATGTCTTTTAACATAGCAGGCAATGAAACAGCAGGAGCAGAACTGGTTTGCGGA
GCTGAATTAGTTTGGGGTGCTTGTACAATTCCAGGACTAGTTCCACTATTATTTGTCGTATTAT
TTAAGTTACTAGCAAGTGTACTATCTGTCCTGATATTATGATTTCCAGTTGTGTTATTTCCAAG
TCTTGTATTTTGATTTGGCTGAAACCCATCACTAGAATATGAGCTAATATTACCTCCATCTTTA
GCCCACCCACCTCGACCTGTAGGTTGCATATCTCTCAGGTTGCCAATGACACCCCTAGATCTTT
TTAACGCGTTCTCATCCACCATAGGTTCATCAACTGCCTTATTCTTACGGCTATTGATTGATAC
TCCACCACCCATGGTCCTATCTTTAGAAGGATTTGGTTCTGCAAAATTCACACGTCGGTTTGCA
TCTGCAACACCACCAGTATCACGATTTAAAAACTTAAGCCTTGGATCTCTACTTTTAGCTGTAG
CTTTTAGCAGGTGGTTGGATCCTGAAACAGAGTTTTCAATCTGTTTAGCATAACCTGGTGGACC
ACCTGCAAAACTGTCACTGTTGCTGCTAACTGTGCTAGGTCGAGAGGGCATCTGATTCACAATT
GGCAACGCAATCTTGTTTGAAGCAGAAAAGCTCGAAACTTCACCAAATACATCACCCCCTTTGT
CTCCAGATTTATCTCCATCACCAGAAGGAGTTGGACTTGGTAGATCATCGCTTGCAAAGTTAGA
CTTCTGCCCATGCTTCTGTTGGTAATAGCAAACAGCCTTCAGTGCATCGTTAAAGGATTGATAC
GAAGAATTCTTCGCAGGCTCAACTCTTTCTAGAACCGATGGTCTGTCAGGTGCCATTGGAAGTG
CTCCATATCCAATGGGCTTTGGCACATCAAAAGGTGGTTTACTATCTCGAGTTGGTGAGGGTAA
GCTGTTTTCGTCATAATCTGCATGAAGATCCAACAAGGGGCTAACCATTCTATTCTTTGCTGGT
ATTTCAACCTTGCTAAATGAATTTCCTGCTCCTGATTCAAATGGTAGTCTCTCTGATAAAACCT
GACCAGATGGAGCTGCAGCATTAGTTGAAGTGGCATTTGGACCATTTGCATTGTCTTTTCCATC
CTCAAACACTAACTGCCTCACACGGCTATCCAGCTGACACAAAGCAAAAGAAAAATAAATGAGC
ATGCTACCACAGCCAAAATTAATAATGGCAGACTCTAAAACCACAAAGTACAAGGTTTACAAAC
CTCATCTCGTTGGTCAGGTGTTAGCATGTCTGAATATCTGTTTTTTATGTGGAATAACAAC
						
					

			
		

Sequences
Splice junction sequence	TGGCAGACTCTAAAACCACAAAGTACAAGGTTTACAAACCTCATCTCGTTGGTCAGGTGTTAGC ATGTCTGAATATCTGTTTTTTATGTGGAATAACAACctttgcagaattgaggagcgtgtgatcc aaatcaagcaccaagcaaagtttccgtgctgcaaacatcttgtgttgttccttgatccgccttg ccctttcc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 2062 Transcript exons: 18743078-18743689,18744218-18745606,18745702-18745762 CTTTGCAGAATTGAGGAGCGTGTGATCCAAATCAAGCACCAAGCAAAGTTTCCGTGCTGCAAAC ATCTTGTGTTGTTCCTTGATCCGCCTTGCCCTTTCCTTCTGAATGAGAGCCTTCTGCTGATCAT CATAACCATCAAGGAGATGATCAACATCTCCATATGGGCTAGCAGGCGGCACAGCATCAGGTGC TGTTACAGGACCAGTACTTGTTGCAGCATCATCATTAGATTCATTCTGTCCAGCAGCTAATCTT GGATCTGCCTTATTTACACTACTTGAAGTTTGCTTTGTATTGCCATGAGGAGGCATAAGTGCTG TAGCAGCTAACTGTGAATTTGAGACAGGATTTGCATTCATGGTGACTGGCCGTGCTGATGATGT AACAGGTAGAGAAGGCAATGCAATAGCCTGAAGTTGCTCTGCCTTTTGGTCTTGGTTGAGCAAA TGGTCCTTGCTGCTCTGAGAGTCTGGCGGAGCAGTTCCATTGCTTTTGGCTTGCTCAACACCAA CTGGAGGAACTGTATCGTTCTTCTGCACTATGTTACTATGGAGTATGCGACGAGGATCACGTGG TTTCATACGTATAACTCCAGTATCATTTTGTGAGTGCATGGGAGCTGACTGCATTGGAACTTGT GGTCTAACAGAAGGGACTGCTGCAACTTCTGTGGTCTTTGGAGCATTGCCAAGTGGTAAAACCA TGCCAGGAGTTACATTACTAGTCATGCCAACAGAAGCAGTTACCTTCTGCTGAGGTTCTGATGC TGACATCTTCTGCTGTTCCATTTGAATCCATTGCATGAGCATTGTTGGATTGACAGCAATGTCT TTTAACATAGCAGGCAATGAAACAGCAGGAGCAGAACTGGTTTGCGGAGCTGAATTAGTTTGGG GTGCTTGTACAATTCCAGGACTAGTTCCACTATTATTTGTCGTATTATTTAAGTTACTAGCAAG TGTACTATCTGTCCTGATATTATGATTTCCAGTTGTGTTATTTCCAAGTCTTGTATTTTGATTT GGCTGAAACCCATCACTAGAATATGAGCTAATATTACCTCCATCTTTAGCCCACCCACCTCGAC CTGTAGGTTGCATATCTCTCAGGTTGCCAATGACACCCCTAGATCTTTTTAACGCGTTCTCATC CACCATAGGTTCATCAACTGCCTTATTCTTACGGCTATTGATTGATACTCCACCACCCATGGTC CTATCTTTAGAAGGATTTGGTTCTGCAAAATTCACACGTCGGTTTGCATCTGCAACACCACCAG TATCACGATTTAAAAACTTAAGCCTTGGATCTCTACTTTTAGCTGTAGCTTTTAGCAGGTGGTT GGATCCTGAAACAGAGTTTTCAATCTGTTTAGCATAACCTGGTGGACCACCTGCAAAACTGTCA CTGTTGCTGCTAACTGTGCTAGGTCGAGAGGGCATCTGATTCACAATTGGCAACGCAATCTTGT TTGAAGCAGAAAAGCTCGAAACTTCACCAAATACATCACCCCCTTTGTCTCCAGATTTATCTCC ATCACCAGAAGGAGTTGGACTTGGTAGATCATCGCTTGCAAAGTTAGACTTCTGCCCATGCTTC TGTTGGTAATAGCAAACAGCCTTCAGTGCATCGTTAAAGGATTGATACGAAGAATTCTTCGCAG GCTCAACTCTTTCTAGAACCGATGGTCTGTCAGGTGCCATTGGAAGTGCTCCATATCCAATGGG CTTTGGCACATCAAAAGGTGGTTTACTATCTCGAGTTGGTGAGGGTAAGCTGTTTTCGTCATAA TCTGCATGAAGATCCAACAAGGGGCTAACCATTCTATTCTTTGCTGGTATTTCAACCTTGCTAA ATGAATTTCCTGCTCCTGATTCAAATGGTAGTCTCTCTGATAAAACCTGACCAGATGGAGCTGC AGCATTAGTTGAAGTGGCATTTGGACCATTTGCATTGTCTTTTCCATCCTCAAACACTAACTGC CTCACACGGCTATCCAGCTCATCTCGTTGGTCAGGTGTTAGCATGTCTGAATATCTGTTTTTTA TGTGGAATAACAAC
Genomic sequence	CTTTGCAGAATTGAGGAGCGTGTGATCCAAATCAAGCACCAAGCAAAGTTTCCGTGCTGCAAAC ATCTTGTGTTGTTCCTTGATCCGCCTTGCCCTTTCCTTCTGAATGAGAGCCTTCTGCTGATCAT CATAACCATCAAGGAGATGATCAACATCTCCATATGGGCTAGCAGGCGGCACAGCATCAGGTGC TGTTACAGGACCAGTACTTGTTGCAGCATCATCATTAGATTCATTCTGTCCAGCAGCTAATCTT GGATCTGCCTTATTTACACTACTTGAAGTTTGCTTTGTATTGCCATGAGGAGGCATAAGTGCTG TAGCAGCTAACTGTGAATTTGAGACAGGATTTGCATTCATGGTGACTGGCCGTGCTGATGATGT AACAGGTAGAGAAGGCAATGCAATAGCCTGAAGTTGCTCTGCCTTTTGGTCTTGGTTGAGCAAA TGGTCCTTGCTGCTCTGAGAGTCTGGCGGAGCAGTTCCATTGCTTTTGGCTTGCTCAACACCAA CTGGAGGAACTGTATCGTTCTTCTGCACTATGTTACTATGGAGTATGCGACGAGGATCACGTGG TTTCATACGTATAACTCCAGTATCATTTTGTGAGTGCTACACAAAAAAGCATTTTTAAACATAA TATTAGTACGAGATCCTAAATATTATAACAAAAGGATTTGGAATTGGCATTAGTAACACGGTGG TTCACCGTGGTATGACGCACAAGCTAATACGACCTACTCATAATAAAAACTTAGTTTTACCTCA TTTATGTCCCTTGATATGCATATAATATATATACTTCTATAAAAAGAGTTGGCAATAATGCAAT ATGATCACTGTCTCCACACAACAAATTGAGTTGGTGGATTCTGTTAATGGATTTTTGCGTGGGC ATCTCAAAAGTTCTCCATGACTCATTGACGAGACAAAAACTATGCATGCAAGTGTTTAATATAA ACTTTGTGGATGCAGTTTTTTCTAACTTATGGCATGTTTATTTGAGATCTTTTGCAAACTTGCA AAGCACATGCCATTAACATCATATGGTATATAAAATTGTATTTGAACCCATTAGGAAGCAAACA GATAAATTGTAAGTACAAACAGAAAACACAGGTGCACTAGTAAGAGAGTTACCATGGGAGCTGA CTGCATTGGAACTTGTGGTCTAACAGAAGGGACTGCTGCAACTTCTGTGGTCTTTGGAGCATTG CCAAGTGGTAAAACCATGCCAGGAGTTACATTACTAGTCATGCCAACAGAAGCAGTTACCTTCT GCTGAGGTTCTGATGCTGACATCTTCTGCTGTTCCATTTGAATCCATTGCATGAGCATTGTTGG ATTGACAGCAATGTCTTTTAACATAGCAGGCAATGAAACAGCAGGAGCAGAACTGGTTTGCGGA GCTGAATTAGTTTGGGGTGCTTGTACAATTCCAGGACTAGTTCCACTATTATTTGTCGTATTAT TTAAGTTACTAGCAAGTGTACTATCTGTCCTGATATTATGATTTCCAGTTGTGTTATTTCCAAG TCTTGTATTTTGATTTGGCTGAAACCCATCACTAGAATATGAGCTAATATTACCTCCATCTTTA GCCCACCCACCTCGACCTGTAGGTTGCATATCTCTCAGGTTGCCAATGACACCCCTAGATCTTT TTAACGCGTTCTCATCCACCATAGGTTCATCAACTGCCTTATTCTTACGGCTATTGATTGATAC TCCACCACCCATGGTCCTATCTTTAGAAGGATTTGGTTCTGCAAAATTCACACGTCGGTTTGCA TCTGCAACACCACCAGTATCACGATTTAAAAACTTAAGCCTTGGATCTCTACTTTTAGCTGTAG CTTTTAGCAGGTGGTTGGATCCTGAAACAGAGTTTTCAATCTGTTTAGCATAACCTGGTGGACC ACCTGCAAAACTGTCACTGTTGCTGCTAACTGTGCTAGGTCGAGAGGGCATCTGATTCACAATT GGCAACGCAATCTTGTTTGAAGCAGAAAAGCTCGAAACTTCACCAAATACATCACCCCCTTTGT CTCCAGATTTATCTCCATCACCAGAAGGAGTTGGACTTGGTAGATCATCGCTTGCAAAGTTAGA CTTCTGCCCATGCTTCTGTTGGTAATAGCAAACAGCCTTCAGTGCATCGTTAAAGGATTGATAC GAAGAATTCTTCGCAGGCTCAACTCTTTCTAGAACCGATGGTCTGTCAGGTGCCATTGGAAGTG CTCCATATCCAATGGGCTTTGGCACATCAAAAGGTGGTTTACTATCTCGAGTTGGTGAGGGTAA GCTGTTTTCGTCATAATCTGCATGAAGATCCAACAAGGGGCTAACCATTCTATTCTTTGCTGGT ATTTCAACCTTGCTAAATGAATTTCCTGCTCCTGATTCAAATGGTAGTCTCTCTGATAAAACCT GACCAGATGGAGCTGCAGCATTAGTTGAAGTGGCATTTGGACCATTTGCATTGTCTTTTCCATC CTCAAACACTAACTGCCTCACACGGCTATCCAGCTGACACAAAGCAAAAGAAAAATAAATGAGC ATGCTACCACAGCCAAAATTAATAATGGCAGACTCTAAAACCACAAAGTACAAGGTTTACAAAC CTCATCTCGTTGGTCAGGTGTTAGCATGTCTGAATATCTGTTTTTTATGTGGAATAACAAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.238350006

Conservation Information
Conserved circRNAs	NA
PMCS	0.238350006

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							18745728-18743326(+)
18745730-18745717(-)
18743264-18745717(-)
						
					

						Potential amino acid sequence
						
							MSEYLFFMWNNNLCRIEERVIQIKHQAKFPCCKHLVLFLDPPCPFLLNESLLLIIITIKEMINI
SIWASRRHSIRCCYRTSTCCSIIIRFILSSS*(+)
MLTPDQRDELDSRVRQLVFEDGKDNANGPNATSTNAAAPSGQVLSERLPFESGAGNSFSKVEIP
AKNRMVSPLLDLHADYDENSLPSPTRDSKPPFDVPKPIGYGALPMAPDRPSVLERVEPAKNSSY
QSFNDALKAVCYYQQKHGQKSNFASDDLPSPTPSGDGDKSGDKGGDVFGEVSSFSASNKIALPI
VNQMPSRPSTVSSNSDSFAGGPPGYAKQIENSVSGSNHLLKATAKSRDPRLKFLNRDTGGVADA
NRRVNFAEPNPSKDRTMGGGVSINSRKNKAVDEPMVDENALKRSRGVIGNLRDMQPTGRGGWAK
DGGNISSYSSDGFQPNQNTRLGNNTTGNHNIRTDSTLASNLNNTTNNSGTSPGIVQAPQTNSAP
QTSSAPAVSLPAMLKDIAVNPTMLMQWIQMEQQKMSASEPQQKVTASVGMTSNVTPGMVLPLGN
APKTTEVAAVPSVRPQVPMQSAPMHSQNDTGVIRMKPRDPRRILHSNIVQKNDTVPPVGVEQAK
SNGTAPPDSQSSKDHLLNQDQKAEQLQAIALPSLPVTSSARPVTMNANPVSNSQLAATALMPPH
GNTKQTSSSVNKADPRLAAGQNESNDDAATSTGPVTAPDAVPPASPYGDVDHLLDGYDDQQKAL
IQKERARRIKEQHKMFAARKLCLVLDLDHTLLNSAKVVIPHKKQIFRHANT*(-)
MLCRLLAHMEMLIISLMVMMISRRLSFRRKGQGGSRNNTRCLQHGNFAWCLIWITRSSILQRLL
FHIKNRYSDMLTPDQRDELDSRVRQLVFEDGKDNANGPNATSTNAAAPSGQVLSERLPFESGAG
NSFSKVEIPAKNRMVSPLLDLHADYDENSLPSPTRDSKPPFDVPKPIGYGALPMAPDRPSVLER
VEPAKNSSYQSFNDALKAVCYYQQKHGQKSNFASDDLPSPTPSGDGDKSGDKGGDVFGEVSSFS
ASNKIALPIVNQMPSRPSTVSSNSDSFAGGPPGYAKQIENSVSGSNHLLKATAKSRDPRLKFLN
RDTGGVADANRRVNFAEPNPSKDRTMGGGVSINSRKNKAVDEPMVDENALKRSRGVIGNLRDMQ
PTGRGGWAKDGGNISSYSSDGFQPNQNTRLGNNTTGNHNIRTDSTLASNLNNTTNNSGTSPGIV
QAPQTNSAPQTSSAPAVSLPAMLKDIAVNPTMLMQWIQMEQQKMSASEPQQKVTASVGMTSNVT
PGMVLPLGNAPKTTEVAAVPSVRPQVPMQSAPMHSQNDTGVIRMKPRDPRRILHSNIVQKNDTV
PPVGVEQAKSNGTAPPDSQSSKDHLLNQDQKAEQLQAIALPSLPVTSSARPVTMNANPVSNSQL
AATALMPPHGNTKQTSSSVNKADPRLAAGQNESNDDAATSTGPVTAPDAVPPASPYGDVDHLLD
GYDDQQKALIQKERARRIKEQHKMFAARKLCLVLDLDHTLLNSAKVVIPHKKQIFRHANT*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	18745728-18743326(+) 18745730-18745717(-) 18743264-18745717(-)
Potential amino acid sequence	MSEYLFFMWNNNLCRIEERVIQIKHQAKFPCCKHLVLFLDPPCPFLLNESLLLIIITIKEMINI SIWASRRHSIRCCYRTSTCCSIIIRFILSSS(+) MLTPDQRDELDSRVRQLVFEDGKDNANGPNATSTNAAAPSGQVLSERLPFESGAGNSFSKVEIP AKNRMVSPLLDLHADYDENSLPSPTRDSKPPFDVPKPIGYGALPMAPDRPSVLERVEPAKNSSY QSFNDALKAVCYYQQKHGQKSNFASDDLPSPTPSGDGDKSGDKGGDVFGEVSSFSASNKIALPI VNQMPSRPSTVSSNSDSFAGGPPGYAKQIENSVSGSNHLLKATAKSRDPRLKFLNRDTGGVADA NRRVNFAEPNPSKDRTMGGGVSINSRKNKAVDEPMVDENALKRSRGVIGNLRDMQPTGRGGWAK DGGNISSYSSDGFQPNQNTRLGNNTTGNHNIRTDSTLASNLNNTTNNSGTSPGIVQAPQTNSAP QTSSAPAVSLPAMLKDIAVNPTMLMQWIQMEQQKMSASEPQQKVTASVGMTSNVTPGMVLPLGN APKTTEVAAVPSVRPQVPMQSAPMHSQNDTGVIRMKPRDPRRILHSNIVQKNDTVPPVGVEQAK SNGTAPPDSQSSKDHLLNQDQKAEQLQAIALPSLPVTSSARPVTMNANPVSNSQLAATALMPPH GNTKQTSSSVNKADPRLAAGQNESNDDAATSTGPVTAPDAVPPASPYGDVDHLLDGYDDQQKAL IQKERARRIKEQHKMFAARKLCLVLDLDHTLLNSAKVVIPHKKQIFRHANT(-) MLCRLLAHMEMLIISLMVMMISRRLSFRRKGQGGSRNNTRCLQHGNFAWCLIWITRSSILQRLL FHIKNRYSDMLTPDQRDELDSRVRQLVFEDGKDNANGPNATSTNAAAPSGQVLSERLPFESGAG NSFSKVEIPAKNRMVSPLLDLHADYDENSLPSPTRDSKPPFDVPKPIGYGALPMAPDRPSVLER VEPAKNSSYQSFNDALKAVCYYQQKHGQKSNFASDDLPSPTPSGDGDKSGDKGGDVFGEVSSFS ASNKIALPIVNQMPSRPSTVSSNSDSFAGGPPGYAKQIENSVSGSNHLLKATAKSRDPRLKFLN RDTGGVADANRRVNFAEPNPSKDRTMGGGVSINSRKNKAVDEPMVDENALKRSRGVIGNLRDMQ PTGRGGWAKDGGNISSYSSDGFQPNQNTRLGNNTTGNHNIRTDSTLASNLNNTTNNSGTSPGIV QAPQTNSAPQTSSAPAVSLPAMLKDIAVNPTMLMQWIQMEQQKMSASEPQQKVTASVGMTSNVT PGMVLPLGNAPKTTEVAAVPSVRPQVPMQSAPMHSQNDTGVIRMKPRDPRRILHSNIVQKNDTV PPVGVEQAKSNGTAPPDSQSSKDHLLNQDQKAEQLQAIALPSLPVTSSARPVTMNANPVSNSQL AATALMPPHGNTKQTSSSVNKADPRLAAGQNESNDDAATSTGPVTAPDAVPPASPYGDVDHLLD GYDDQQKALIQKERARRIKEQHKMFAARKLCLVLDLDHTLLNSAKVVIPHKKQIFRHANT*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os11g0521900_circ_g.1

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