Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G05860_circ_g.1 |
ID in PlantcircBase | ath_circ_000882 |
Alias | Chr1:1769638|1770055 |
Organism | Arabidpsis thaliana |
Position | chr1: 1769638-1770055 JBrowse» |
Reference genome | TAIR10.38 |
Type | ei-circRNA |
Identification method | CIRCexplorer; CIRI |
Parent gene | AT1G05860 |
Parent gene annotation |
INO80 complex subunit D-like protein |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | 4 |
Tissues | seedling |
Exon boundary | Yes-No |
Splicing signals | AA-AA |
Number of exons covered | AT1G05860.2:1 AT1G05860.1:1 AT1G05860.3:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.119417863 |
Functional Information | |
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Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | responsive to methyl jasmonate |
Other Information | |
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References | Zhang et al., 2020 |