Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | Zm00001d037114_circ_g.1 |
ID in PlantcircBase | zma_circ_002272 |
Alias | circ1061 |
Organism | Zea mays |
Position | chr6: 112862312-112863275 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d037114 |
Parent gene annotation |
LRR receptor-like serine/threonine-protein kinase ERECTA |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | 3 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d037114_T011:6 Zm00001d037114_T010:6 Zm00001d037114_T004:6 Zm00001d037114_T005:6 Zm00001d037114_T001:6 Zm00001d037114_T007:6 Zm00001d037114_T012:6 Zm00001d037114_T002:6 Zm00001d037114_T006:6 Zm00001d037114_T008:6 Zm00001d037114_T003:6 Zm00001d037114_T009:6 |
Conservation Information | |
---|---|
Conserved circRNAs | osi_circ_016776* |
PMCS | 0.101949689 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Chen et al., 2017b |