Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d013267_circ_g.3 |
ID in PlantcircBase | zma_circ_001882 |
Alias | circ867 |
Organism | Zea mays |
Position | chr5: 7502574-7503133 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d013267 |
Parent gene annotation |
Serine/threonine-protein kinase TOUSLED |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | 3 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d013267_T030:2 Zm00001d013267_T021:2 Zm00001d013267_T041:2 Zm00001d013267_T003:1 Zm00001d013267_T025:1 Zm00001d013267_T018:2 Zm00001d013267_T046:2 Zm00001d013267_T042:2 Zm00001d013267_T019:2 Zm00001d013267_T022:2 Zm00001d013267_T044:2 Zm00001d013267_T006:2 Zm00001d013267_T040:1 Zm00001d013267_T011:2 Zm00001d013267_T016:2 Zm00001d013267_T027:2 Zm00001d013267_T048:2 Zm00001d013267_T013:2 Zm00001d013267_T037:2 Zm00001d013267_T005:2 Zm00001d013267_T020:2 Zm00001d013267_T002:2 Zm00001d013267_T004:2 Zm00001d013267_T031:2 Zm00001d013267_T001:2 Zm00001d013267_T038:2 Zm00001d013267_T026:2 Zm00001d013267_T029:2 Zm00001d013267_T034:2 Zm00001d013267_T028:2 Zm00001d013267_T045:2 Zm00001d013267_T043:2 Zm00001d013267_T009:2 Zm00001d013267_T023:2 Zm00001d013267_T047:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.038402976 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |