Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os01g0865600_circ_g.6 |
ID in PlantcircBase | osa_circ_004948 |
Alias | Os_ciR6288 |
Organism | Oryza sativa |
Position | chr1: 37462587-37463325 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ue-circRNA |
Identification method | find_circ |
Parent gene | Os01g0865600 |
Parent gene annotation |
Basic helix-loop-helix dimerisation region bHLH domain containin g protein. (Os01t0865600-01);Basic helix-loop-helix dimerisation region bHLH domain containing protein. (Os01t0865600-02) |
Parent gene strand | + |
Alternative splicing | Os01g0865600_circ_g.1 Os01g0865600_circ_g.2 Os01g0865600_circ_g.3 Os01g0865600_circ_g.4 Os01g0865600_circ_g.5 |
Support reads | 2 |
Tissues | root |
Exon boundary | Yes-No |
Splicing signals | GT-AG |
Number of exons covered | Os01t0865600-02:3 Os01t0865600-01:3 |
Conservation Information | |
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Conserved circRNAs | osi_circ_010961 |
PMCS | 0.157875812 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015 |