Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d045104_circ_g.1 |
ID in PlantcircBase | zma_circ_002899 |
Alias | circ1366 |
Organism | Zea mays |
Position | chr9: 12693039-12694432 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d045104 |
Parent gene annotation |
Ubiquitin carboxyl-terminal hydrolase |
Parent gene strand | + |
Alternative splicing | Zm00001d045104_circ_g.2 |
Support reads | 3 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-AA |
Number of exons covered | Zm00001d045104_T001:3 Zm00001d045104_T009:4 Zm00001d045104_T003:3 Zm00001d045104_T010:4 Zm00001d045104_T004:3 Zm00001d045104_T006:4 Zm00001d045104_T013:4 Zm00001d045104_T015:2 Zm00001d045104_T017:3 Zm00001d045104_T014:1 Zm00001d045104_T002:3 Zm00001d045104_T012:4 Zm00001d045104_T016:4 Zm00001d045104_T005:4 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.127986484 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |