Plant Circular RNA Database

Detail information of Csa3G462690_circ_g.2

			
						 General Information
					
						CircRNA Name
						Csa3G462690_circ_g.2
					
						ID in PlantcircBase
						csa_circ_001800
					
						Alias
						Chr3:20827778_20830616
					
						Organism
						
							Cucumis sativus						
					
						Position
						
							chrChr3: 20827778-20830616  JBrowse»						
					
						Reference genome
						
							Cucumis sativus v1.5						
					
						Type  
						
							e-circRNA							
									
						Identification method
						Find_circ
					
						Parent gene
						
							Csa3G462690						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						-
					
						Alternative splicing
						
							Csa3G462690_circ_g.1 						
					
						Support reads
						NA
					
						Tissues
						leaf
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Csa3G462690.1:3

General Information
CircRNA Name	Csa3G462690_circ_g.2
ID in PlantcircBase	csa_circ_001800
Alias	Chr3:20827778_20830616
Organism	Cucumis sativus
Position	chrChr3: 20827778-20830616 JBrowse»
Reference genome	Cucumis sativus v1.5
Type	e-circRNA
Identification method	Find_circ
Parent gene	Csa3G462690
Parent gene annotation	NA
Parent gene strand	-
Alternative splicing	Csa3G462690_circ_g.1
Support reads	NA
Tissues	leaf
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Csa3G462690.1:3

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGTAATGAAATAATTGGCGGACAGCCACAGAGTTCCTCTGCATTTCCCTTCTGAACTCCACACC
CGACTTCCCAACTGCATACTTTATCAACCTAAGAGCagagataaaatcaaacgccctcgtatct
tccttctttgaactattcatcacagacgtagatgattgtgctgcaagattcggctggaatatgt
ctggaaag

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1830
Transcript exons: 20827778-20828725,20829594-20829749,20829891-20830616
AGAGATAAAATCAAACGCCCTCGTATCTTCCTTCTTTGAACTATTCATCACAGACGTAGATGAT
TGTGCTGCAAGATTCGGCTGGAATATGTCTGGAAAGGGAGAAGAATATCCTCCACTACCCACAC
CACCACCACCACTGTTCGATTGGAGATTGGGGTTTCCGAACTGTTGGTAATTGGACATGGCTGA
TAATAATTGTTGTTGAGTAAAGAAGTTTCCAGTGGCAGCATAAGCCATTGGCTGAGAAGAAAAG
GCTGGATTGAACACCATGCCTGAGGGAAGATAAGTCATTCCAGGGAAAAATGCAGCATTCATAT
TTGACCCAGCCATTGGTGAACTGTAGATGCCATTTAAAGAATCTTGAGAAACCTGATTCTGATG
GTTGGGTTGAGCAGAAGCCGAGAATAAAGATTCAGACAGTGAATCCTTAGAATCCCCTTTATCT
TTGCCCTTCAATATATCTTCATGGATGGACAAACCACTCATTAAGTCATTAACATCTTTCCTAG
CATGTTCTTGTACTGCAGGTTCAGAACTTGATCCAAAAATATCAAAAACTCCAGGTTCATTTTT
CGGCTCCAAGGCAGCCTTTTTATTTTCATTAGAAACCTGATTATTATCAAAATTCATCCCAGAA
AACAGATCATCTGGATTTTCCCTAGTTTCAATTGTATGAAACGAGACATCTGAAAAGGGGTCAT
CATCATTCTTTAGTTCGCTGGTGCTTGTGACAGTGTTTAGGCCATCTCCAAATAAGTCATCAAC
TAATGGGGTACTTGACAGGTTTTCCACCTCTACGGATTTGTTTGTTCCACTGAAATCACCTGCA
TCACTGGTGTCTATTAAGTCTGGCATCTGAATGGTGGAACTGGTGTTGCTTGGTAGAGACTTCT
CGTAAACATTAATGGAGGGAACTCCTTTACCTCCATCTAAAAGAGGCATAACCTTGGTAGCTTT
TTCCCTAAGAGATGCTTGGGGAGATTCAGAACATCCAATCACTGCTTCTTGATTTTCACTGAAA
TAAGATGTCACAATTGAAAATTGATCGTCGTCATTTCTCCTAACAATCGACTCAAGGATGCAGA
GAGCTTTGAAACGAACCTGCCATGATGGGGATTTAAGCTTTGTTTCAAGAGCATTACTCAGCGC
CAATGCATCTAACTTTACAGCTTCTACAAGAAATGCTTGAATGGAATCCCGAGTTGGTTGTAAA
CGCACACCACCTGCTGTTGCAATGGTGTCCAGTAACCTATCCTCTCGAGTTTTGCTCTCCGAAG
AGCCCGAACTAGGGCTCCCATTACTTACCCTAGAATCCTGGTTCCAAGTTCCACTAGTAGTACT
CTTTGATGTCCCCAGAGTCTCACGACCATATTCAACTGGTTCATATCTATTATCATACTCCATT
TCAGTAGTCAATGACCTCTGAAGGTTGATACCCCGGTGGCTACTAGTGCCATTCTTTCTAGATG
AATGACCTTGCGCAAAATTACTTAGACCTTGCTTGATTGATGCACTGCCTAGACCAACTACCTC
GCTAAGAAATGATTTTTTATCTTCTGGTGGTGGTTCATAATTTGAATTCCCAAAACCTTGAATT
CGGCGATTAAGATTCTCAGATGGTGCAGGCTTGTTATCCTCTTCAGCAAAGATAGAAGAAATGG
CCTCATGAGCAGTATCCCTCACAGCTTTATTGAGTGCATCACCTTTCAGGGGGTCCGGTTGTCC
CTTGTAATGAAATAATTGGCGGACAGCCACAGAGTTCCTCTGCATTTCCCTTCTGAACTCCACA
CCCGACTTCCCAACTGCATACTTTATCAACCTAAGAGC
						
					

						Genomic sequence
						
							AGAGATAAAATCAAACGCCCTCGTATCTTCCTTCTTTGAACTATTCATCACAGACGTAGATGAT
TGTGCTGCAAGATTCGGCTGGAATATGTCTGGAAAGGGAGAAGAATATCCTCCACTACCCACAC
CACCACCACCACTGTTCGATTGGAGATTGGGGTTTCCGAACTGTTGGTAATTGGACATGGCTGA
TAATAATTGTTGTTGAGTAAAGAAGTTTCCAGTGGCAGCATAAGCCATTGGCTGAGAAGAAAAG
GCTGGATTGAACACCATGCCTGAGGGAAGATAAGTCATTCCAGGGAAAAATGCAGCATTCATAT
TTGACCCAGCCATTGGTGAACTGTAGATGCCATTTAAAGAATCTTGAGAAACCTGATTCTGATG
GTTGGGTTGAGCAGAAGCCGAGAATAAAGATTCAGACAGTGAATCCTTAGAATCCCCTTTATCT
TTGCCCTTCAATATATCTTCATGGATGGACAAACCACTCATTAAGTCATTAACATCTTTCCTAG
CATGTTCTTGTACTGCAGGTTCAGAACTTGATCCAAAAATATCAAAAACTCCAGGTTCATTTTT
CGGCTCCAAGGCAGCCTTTTTATTTTCATTAGAAACCTGATTATTATCAAAATTCATCCCAGAA
AACAGATCATCTGGATTTTCCCTAGTTTCAATTGTATGAAACGAGACATCTGAAAAGGGGTCAT
CATCATTCTTTAGTTCGCTGGTGCTTGTGACAGTGTTTAGGCCATCTCCAAATAAGTCATCAAC
TAATGGGGTACTTGACAGGTTTTCCACCTCTACGGATTTGTTTGTTCCACTGAAATCACCTGCA
TCACTGGTGTCTATTAAGTCTGGCATCTGAATGGTGGAACTGGTGTTGCTTGGTAGAGACTTCT
CGTAAACATTAATGGAGGGAACTCCTTTACCTCCATCTAAAAGAGGCATAACCTGTCCAAAGAG
TCGAGGGACTAAATTATAATTCCTTTTCATGATAAGACCACAAAGTTGAGACTAAATTACTTAT
CATTCCAACATATGTTTTTCGAGCAATTGTGACAAATTTATGCTTGTAATCAAAGATAAAAATC
CAAATCATGAATTTATTCAGCAATTTCATCAACTATCTGTTAGATACCTAGATTAGTATAGGGT
TAGGGGTATAAGGGTAATTAGTTATTTAGGAAGTAATTAGCAGTTATTGTGTAAGCGTGGTTAC
TAGTAGTTATTATGTAAGTGTGGTCACTAGGGTGGTTACATCTTGTTATAAATGGAGGGAGGGT
AAGTAAGGGGAGAATTCTGGGAAGTGATCTAGGGCTTGGGTGAGAGTACTCAAGAGGGAGGTTC
CAAGTGCCTTATACTTGGTTTTATCTTGTATTTTCTTATAGTTACATTATAATAAACTTAGATC
TTGTTCTCTTTAGGAAGTATCCTAACAAAATCATGCAGTGGCTTCTTAAAGAATAAATATTCAT
TTCAAAAGAGAAGCAAAGTAAATAACGTTATAACAGATTCTATTGTTTCAAGGAACTGTATACA
AATACCACTGTAGCTGCATCAAATATTTCCTTACCTGGTCAACCAAATCTTGTAGAATATGTAA
CAGAAAAAGTTATTACAATAAGGTTTATGGGATATAACAATGTCAATGTTACCCACAACTCTCA
CTAATTATGATATTAGTATATTATAACTTTTACATCTCGACTGGATTAAATAAGATAGAGGAGT
TAACTCTGAAATGATCTTTCCCATTCAAAGAAAATTTAGGAAAGAAAAAAAAACCTCCAATACC
ACTTTAAGAAGAGAGGTGGTTTACCTTGGTAGCTTTTTCCCTAAGAGATGCTTGGGGAGATTCA
GAACATCCAATCACTGCTTCTTGATTTTCACTGAAATAAGATGTCACAATTGAAAATTGATCGT
CGTCATTTCTCCTAACAATCGACTCAAGGATGCAGAGAGCTTTGAAACGAACCTGAAGAATGAA
ATCCTCATCAAAACAGATTGAGTGAAAATAAGTATACAAGTATCAACTAACATTATTTTGATCC
AAAATGGAAAGCCAGCCCTTGCTCATTCAATATCATAGAAAAGAAGATTAACAGCAAGAACATG
CCTGCCATGATGGGGATTTAAGCTTTGTTTCAAGAGCATTACTCAGCGCCAATGCATCTAACTT
TACAGCTTCTACAAGAAATGCTTGAATGGAATCCCGAGTTGGTTGTAAACGCACACCACCTGCT
GTTGCAATGGTGTCCAGTAACCTATCCTCTCGAGTTTTGCTCTCCGAAGAGCCCGAACTAGGGC
TCCCATTACTTACCCTAGAATCCTGGTTCCAAGTTCCACTAGTAGTACTCTTTGATGTCCCCAG
AGTCTCACGACCATATTCAACTGGTTCATATCTATTATCATACTCCATTTCAGTAGTCAATGAC
CTCTGAAGGTTGATACCCCGGTGGCTACTAGTGCCATTCTTTCTAGATGAATGACCTTGCGCAA
AATTACTTAGACCTTGCTTGATTGATGCACTGCCTAGACCAACTACCTCGCTAAGAAATGATTT
TTTATCTTCTGGTGGTGGTTCATAATTTGAATTCCCAAAACCTTGAATTCGGCGATTAAGATTC
TCAGATGGTGCAGGCTTGTTATCCTCTTCAGCAAAGATAGAAGAAATGGCCTCATGAGCAGTAT
CCCTCACAGCTTTATTGAGTGCATCACCTTTCAGGGGGTCCGGTTGTCCCTTGTAATGAAATAA
TTGGCGGACAGCCACAGAGTTCCTCTGCATTTCCCTTCTGAACTCCACACCCGACTTCCCAACT
GCATACTTTATCAACCTAAGAGC
						
					

			
		

Sequences
Splice junction sequence	TGTAATGAAATAATTGGCGGACAGCCACAGAGTTCCTCTGCATTTCCCTTCTGAACTCCACACC CGACTTCCCAACTGCATACTTTATCAACCTAAGAGCagagataaaatcaaacgccctcgtatct tccttctttgaactattcatcacagacgtagatgattgtgctgcaagattcggctggaatatgt ctggaaag
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1830 Transcript exons: 20827778-20828725,20829594-20829749,20829891-20830616 AGAGATAAAATCAAACGCCCTCGTATCTTCCTTCTTTGAACTATTCATCACAGACGTAGATGAT TGTGCTGCAAGATTCGGCTGGAATATGTCTGGAAAGGGAGAAGAATATCCTCCACTACCCACAC CACCACCACCACTGTTCGATTGGAGATTGGGGTTTCCGAACTGTTGGTAATTGGACATGGCTGA TAATAATTGTTGTTGAGTAAAGAAGTTTCCAGTGGCAGCATAAGCCATTGGCTGAGAAGAAAAG GCTGGATTGAACACCATGCCTGAGGGAAGATAAGTCATTCCAGGGAAAAATGCAGCATTCATAT TTGACCCAGCCATTGGTGAACTGTAGATGCCATTTAAAGAATCTTGAGAAACCTGATTCTGATG GTTGGGTTGAGCAGAAGCCGAGAATAAAGATTCAGACAGTGAATCCTTAGAATCCCCTTTATCT TTGCCCTTCAATATATCTTCATGGATGGACAAACCACTCATTAAGTCATTAACATCTTTCCTAG CATGTTCTTGTACTGCAGGTTCAGAACTTGATCCAAAAATATCAAAAACTCCAGGTTCATTTTT CGGCTCCAAGGCAGCCTTTTTATTTTCATTAGAAACCTGATTATTATCAAAATTCATCCCAGAA AACAGATCATCTGGATTTTCCCTAGTTTCAATTGTATGAAACGAGACATCTGAAAAGGGGTCAT CATCATTCTTTAGTTCGCTGGTGCTTGTGACAGTGTTTAGGCCATCTCCAAATAAGTCATCAAC TAATGGGGTACTTGACAGGTTTTCCACCTCTACGGATTTGTTTGTTCCACTGAAATCACCTGCA TCACTGGTGTCTATTAAGTCTGGCATCTGAATGGTGGAACTGGTGTTGCTTGGTAGAGACTTCT CGTAAACATTAATGGAGGGAACTCCTTTACCTCCATCTAAAAGAGGCATAACCTTGGTAGCTTT TTCCCTAAGAGATGCTTGGGGAGATTCAGAACATCCAATCACTGCTTCTTGATTTTCACTGAAA TAAGATGTCACAATTGAAAATTGATCGTCGTCATTTCTCCTAACAATCGACTCAAGGATGCAGA GAGCTTTGAAACGAACCTGCCATGATGGGGATTTAAGCTTTGTTTCAAGAGCATTACTCAGCGC CAATGCATCTAACTTTACAGCTTCTACAAGAAATGCTTGAATGGAATCCCGAGTTGGTTGTAAA CGCACACCACCTGCTGTTGCAATGGTGTCCAGTAACCTATCCTCTCGAGTTTTGCTCTCCGAAG AGCCCGAACTAGGGCTCCCATTACTTACCCTAGAATCCTGGTTCCAAGTTCCACTAGTAGTACT CTTTGATGTCCCCAGAGTCTCACGACCATATTCAACTGGTTCATATCTATTATCATACTCCATT TCAGTAGTCAATGACCTCTGAAGGTTGATACCCCGGTGGCTACTAGTGCCATTCTTTCTAGATG AATGACCTTGCGCAAAATTACTTAGACCTTGCTTGATTGATGCACTGCCTAGACCAACTACCTC GCTAAGAAATGATTTTTTATCTTCTGGTGGTGGTTCATAATTTGAATTCCCAAAACCTTGAATT CGGCGATTAAGATTCTCAGATGGTGCAGGCTTGTTATCCTCTTCAGCAAAGATAGAAGAAATGG CCTCATGAGCAGTATCCCTCACAGCTTTATTGAGTGCATCACCTTTCAGGGGGTCCGGTTGTCC CTTGTAATGAAATAATTGGCGGACAGCCACAGAGTTCCTCTGCATTTCCCTTCTGAACTCCACA CCCGACTTCCCAACTGCATACTTTATCAACCTAAGAGC
Genomic sequence	AGAGATAAAATCAAACGCCCTCGTATCTTCCTTCTTTGAACTATTCATCACAGACGTAGATGAT TGTGCTGCAAGATTCGGCTGGAATATGTCTGGAAAGGGAGAAGAATATCCTCCACTACCCACAC CACCACCACCACTGTTCGATTGGAGATTGGGGTTTCCGAACTGTTGGTAATTGGACATGGCTGA TAATAATTGTTGTTGAGTAAAGAAGTTTCCAGTGGCAGCATAAGCCATTGGCTGAGAAGAAAAG GCTGGATTGAACACCATGCCTGAGGGAAGATAAGTCATTCCAGGGAAAAATGCAGCATTCATAT TTGACCCAGCCATTGGTGAACTGTAGATGCCATTTAAAGAATCTTGAGAAACCTGATTCTGATG GTTGGGTTGAGCAGAAGCCGAGAATAAAGATTCAGACAGTGAATCCTTAGAATCCCCTTTATCT TTGCCCTTCAATATATCTTCATGGATGGACAAACCACTCATTAAGTCATTAACATCTTTCCTAG CATGTTCTTGTACTGCAGGTTCAGAACTTGATCCAAAAATATCAAAAACTCCAGGTTCATTTTT CGGCTCCAAGGCAGCCTTTTTATTTTCATTAGAAACCTGATTATTATCAAAATTCATCCCAGAA AACAGATCATCTGGATTTTCCCTAGTTTCAATTGTATGAAACGAGACATCTGAAAAGGGGTCAT CATCATTCTTTAGTTCGCTGGTGCTTGTGACAGTGTTTAGGCCATCTCCAAATAAGTCATCAAC TAATGGGGTACTTGACAGGTTTTCCACCTCTACGGATTTGTTTGTTCCACTGAAATCACCTGCA TCACTGGTGTCTATTAAGTCTGGCATCTGAATGGTGGAACTGGTGTTGCTTGGTAGAGACTTCT CGTAAACATTAATGGAGGGAACTCCTTTACCTCCATCTAAAAGAGGCATAACCTGTCCAAAGAG TCGAGGGACTAAATTATAATTCCTTTTCATGATAAGACCACAAAGTTGAGACTAAATTACTTAT CATTCCAACATATGTTTTTCGAGCAATTGTGACAAATTTATGCTTGTAATCAAAGATAAAAATC CAAATCATGAATTTATTCAGCAATTTCATCAACTATCTGTTAGATACCTAGATTAGTATAGGGT TAGGGGTATAAGGGTAATTAGTTATTTAGGAAGTAATTAGCAGTTATTGTGTAAGCGTGGTTAC TAGTAGTTATTATGTAAGTGTGGTCACTAGGGTGGTTACATCTTGTTATAAATGGAGGGAGGGT AAGTAAGGGGAGAATTCTGGGAAGTGATCTAGGGCTTGGGTGAGAGTACTCAAGAGGGAGGTTC CAAGTGCCTTATACTTGGTTTTATCTTGTATTTTCTTATAGTTACATTATAATAAACTTAGATC TTGTTCTCTTTAGGAAGTATCCTAACAAAATCATGCAGTGGCTTCTTAAAGAATAAATATTCAT TTCAAAAGAGAAGCAAAGTAAATAACGTTATAACAGATTCTATTGTTTCAAGGAACTGTATACA AATACCACTGTAGCTGCATCAAATATTTCCTTACCTGGTCAACCAAATCTTGTAGAATATGTAA CAGAAAAAGTTATTACAATAAGGTTTATGGGATATAACAATGTCAATGTTACCCACAACTCTCA CTAATTATGATATTAGTATATTATAACTTTTACATCTCGACTGGATTAAATAAGATAGAGGAGT TAACTCTGAAATGATCTTTCCCATTCAAAGAAAATTTAGGAAAGAAAAAAAAACCTCCAATACC ACTTTAAGAAGAGAGGTGGTTTACCTTGGTAGCTTTTTCCCTAAGAGATGCTTGGGGAGATTCA GAACATCCAATCACTGCTTCTTGATTTTCACTGAAATAAGATGTCACAATTGAAAATTGATCGT CGTCATTTCTCCTAACAATCGACTCAAGGATGCAGAGAGCTTTGAAACGAACCTGAAGAATGAA ATCCTCATCAAAACAGATTGAGTGAAAATAAGTATACAAGTATCAACTAACATTATTTTGATCC AAAATGGAAAGCCAGCCCTTGCTCATTCAATATCATAGAAAAGAAGATTAACAGCAAGAACATG CCTGCCATGATGGGGATTTAAGCTTTGTTTCAAGAGCATTACTCAGCGCCAATGCATCTAACTT TACAGCTTCTACAAGAAATGCTTGAATGGAATCCCGAGTTGGTTGTAAACGCACACCACCTGCT GTTGCAATGGTGTCCAGTAACCTATCCTCTCGAGTTTTGCTCTCCGAAGAGCCCGAACTAGGGC TCCCATTACTTACCCTAGAATCCTGGTTCCAAGTTCCACTAGTAGTACTCTTTGATGTCCCCAG AGTCTCACGACCATATTCAACTGGTTCATATCTATTATCATACTCCATTTCAGTAGTCAATGAC CTCTGAAGGTTGATACCCCGGTGGCTACTAGTGCCATTCTTTCTAGATGAATGACCTTGCGCAA AATTACTTAGACCTTGCTTGATTGATGCACTGCCTAGACCAACTACCTCGCTAAGAAATGATTT TTTATCTTCTGGTGGTGGTTCATAATTTGAATTCCCAAAACCTTGAATTCGGCGATTAAGATTC TCAGATGGTGCAGGCTTGTTATCCTCTTCAGCAAAGATAGAAGAAATGGCCTCATGAGCAGTAT CCCTCACAGCTTTATTGAGTGCATCACCTTTCAGGGGGTCCGGTTGTCCCTTGTAATGAAATAA TTGGCGGACAGCCACAGAGTTCCTCTGCATTTCCCTTCTGAACTCCACACCCGACTTCCCAACT GCATACTTTATCAACCTAAGAGC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.484788303

Conservation Information
Conserved circRNAs	NA
PMCS	0.484788303

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							20830561-20827780(-)
						
					

						Potential amino acid sequence
						
							MQRNSVAVRQLFHYKGQPDPLKGDALNKAVRDTAHEAISSIFAEEDNKPAPSENLNRRIQGFGN
SNYEPPPEDKKSFLSEVVGLGSASIKQGLSNFAQGHSSRKNGTSSHRGINLQRSLTTEMEYDNR
YEPVEYGRETLGTSKSTTSGTWNQDSRVSNGSPSSGSSESKTREDRLLDTIATAGGVRLQPTRD
SIQAFLVEAVKLDALALSNALETKLKSPSWQVRFKALCILESIVRRNDDDQFSIVTSYFSENQE
AVIGCSESPQASLREKATKVMPLLDGGKGVPSINVYEKSLPSNTSSTIQMPDLIDTSDAGDFSG
TNKSVEVENLSSTPLVDDLFGDGLNTVTSTSELKNDDDPFSDVSFHTIETRENPDDLFSGMNFD
NNQVSNENKKAALEPKNEPGVFDIFGSSSEPAVQEHARKDVNDLMSGLSIHEDILKGKDKGDSK
DSLSESLFSASAQPNHQNQVSQDSLNGIYSSPMAGSNMNAAFFPGMTYLPSGMVFNPAFSSQPM
AYAATGNFFTQQQLLSAMSNYQQFGNPNLQSNSGGGGVGSGGYSSPFPDIFQPNLAAQSSTSVM
NSSKKEDTRAFDFISALRLIKYAVGKSGVEFRREMQRNSVAVRQLFHYKGQPDPLKGDALNKAV
RDTAHEAISSIFAEEDNKPAPSENLNRRIQGFGNSNYEPPPEDKKSFLSEVVGLGSASIKQGLS
NFAQGHSSRKNGTSSHRGINLQRSLTTEMEYDNRYEPVEYGRETLGTSKSTTSGTWNQDSRVSN
GSPSSGSSESKTREDRLLDTIATAGGVRLQPTRDSIQAFLVEAVKLDALALSNALETKLKSPSW
QVRFKALCILESIVRRNDDDQFSIVTSYFSENQEAVIGCSESPQASLREKATKVMPLLDGGKGV
PSINVYEKSLPSNTSSTIQMPDLIDTSDAGDFSGTNKSVEVENLSSTPLVDDLFGDGLNTVTST
SELKNDDDPFSDVSFHTIETRENPDDLFSGMNFDNNQVSNENKKAALEPKNEPGVFDIFGSSSE
PAVQEHARKDVNDLMSGLSIHEDILKGKDKGDSKDSLSESLFSASAQPNHQNQVSQDSLNGIYS
SPMAGSNMNAAFFPGMTYLPSGMVFNPAFSSQPMAYAATGNFFTQQQLLSAMSNYQQFGNPNLQ
SNSGGGGVGSGGYSSPFPDIFQPNLAAQSSTSVMNSSKKEDTRAFDFISALRLIKYAVGKSGVE
FRREMQRNSVAVRQLFHYKGQPDPLKGDALNKAVRDTAHEAISSIFAEEDNKPAPSENLNRRIQ
GFGNSNYEPPPEDKKSFLSEVVGLGSASIKQGLSNFAQGHSSRKNGTSSHRGINLQRSLTTEME
YDNRYEPVEYGRETLGTSKSTTSGTWNQDSRVSNGSPSSGSSESKTREDRLLDTIATAGGVRLQ
PTRDSIQAFLVEAVKLDALALSNALETKLKSPSWQVRFKALCILESIVRRNDDDQFSIVTSYFS
ENQEAVIGCSESPQASLREKATKVMPLLDGGKGVPSINVYEKSLPSNTSSTIQMPDLIDTSDAG
DFSGTNKSVEVENLSSTPLVDDLFGDGLNTVTSTSELKNDDDPFSDVSFHTIETRENPDDLFSG
MNFDNNQVSNENKKAALEPKNEPGVFDIFGSSSEPAVQEHARKDVNDLMSGLSIHEDILKGKDK
GDSKDSLSESLFSASAQPNHQNQVSQDSLNGIYSSPMAGSNMNAAFFPGMTYLPSGMVFNPAFS
SQPMAYAATGNFFTQQQLLSAMSNYQQFGNPNLQSNSGGGGVGSGGYSSPFPDIFQPNLAAQSS
TSVMNSSKKEDTRAFDFISALRLIKYAVGKSGVEFRREMQRNSVAVRQLFHYKGQPDPLKGDAL
NKAVRDTAHEAISSIFAEEDNKPAPSENLNRRIQGFGNSNYEPPPEDKKSFLSEVVGLGSASIK
QGLSNFAQGHSSRKNGTSSHRGINLQRSLTTEMEYDNRYEPVEYGRETLGTSKSTTSGTWNQDS
RVSNGSPSSGSSESKTREDRLLDTIATAGGVRLQPTRDSIQAFLVEAVKLDALALSNALETKLK
SPSWQVRFKALCILESIVRRNDDDQFSIVTSYFSENQEAVIGCSESPQASLREKATKVMPLLDG
GKGVPSINVYEKSLPSNTSSTIQMPDLIDTSDAGDFSGTNKSVEVENLSSTPLVDDLFGDGLNT
VTSTSELKNDDDPFSDVSFHTIETRENPDDLFSGMNFDNNQVSNENKKAALEPKNEPGVFDIFG
SSSEPAVQEHARKDVNDLMSGLSIHEDILKGKDKGDSKDSLSESLFSASAQPNHQNQVSQDSLN
GIYSSPMAGSNMNAAFFPGMTYLPSGMVFNPAFSSQPMAYAATGNFFTQQQLLSAMSNYQQFGN
PNLQSNSGGGGVGSGGYSSPFPDIFQPNLAAQSSTSVMNSSKKEDTRAFDFIS
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	20830561-20827780(-)
Potential amino acid sequence	MQRNSVAVRQLFHYKGQPDPLKGDALNKAVRDTAHEAISSIFAEEDNKPAPSENLNRRIQGFGN SNYEPPPEDKKSFLSEVVGLGSASIKQGLSNFAQGHSSRKNGTSSHRGINLQRSLTTEMEYDNR YEPVEYGRETLGTSKSTTSGTWNQDSRVSNGSPSSGSSESKTREDRLLDTIATAGGVRLQPTRD SIQAFLVEAVKLDALALSNALETKLKSPSWQVRFKALCILESIVRRNDDDQFSIVTSYFSENQE AVIGCSESPQASLREKATKVMPLLDGGKGVPSINVYEKSLPSNTSSTIQMPDLIDTSDAGDFSG TNKSVEVENLSSTPLVDDLFGDGLNTVTSTSELKNDDDPFSDVSFHTIETRENPDDLFSGMNFD NNQVSNENKKAALEPKNEPGVFDIFGSSSEPAVQEHARKDVNDLMSGLSIHEDILKGKDKGDSK DSLSESLFSASAQPNHQNQVSQDSLNGIYSSPMAGSNMNAAFFPGMTYLPSGMVFNPAFSSQPM AYAATGNFFTQQQLLSAMSNYQQFGNPNLQSNSGGGGVGSGGYSSPFPDIFQPNLAAQSSTSVM NSSKKEDTRAFDFISALRLIKYAVGKSGVEFRREMQRNSVAVRQLFHYKGQPDPLKGDALNKAV RDTAHEAISSIFAEEDNKPAPSENLNRRIQGFGNSNYEPPPEDKKSFLSEVVGLGSASIKQGLS NFAQGHSSRKNGTSSHRGINLQRSLTTEMEYDNRYEPVEYGRETLGTSKSTTSGTWNQDSRVSN GSPSSGSSESKTREDRLLDTIATAGGVRLQPTRDSIQAFLVEAVKLDALALSNALETKLKSPSW QVRFKALCILESIVRRNDDDQFSIVTSYFSENQEAVIGCSESPQASLREKATKVMPLLDGGKGV PSINVYEKSLPSNTSSTIQMPDLIDTSDAGDFSGTNKSVEVENLSSTPLVDDLFGDGLNTVTST SELKNDDDPFSDVSFHTIETRENPDDLFSGMNFDNNQVSNENKKAALEPKNEPGVFDIFGSSSE PAVQEHARKDVNDLMSGLSIHEDILKGKDKGDSKDSLSESLFSASAQPNHQNQVSQDSLNGIYS SPMAGSNMNAAFFPGMTYLPSGMVFNPAFSSQPMAYAATGNFFTQQQLLSAMSNYQQFGNPNLQ SNSGGGGVGSGGYSSPFPDIFQPNLAAQSSTSVMNSSKKEDTRAFDFISALRLIKYAVGKSGVE FRREMQRNSVAVRQLFHYKGQPDPLKGDALNKAVRDTAHEAISSIFAEEDNKPAPSENLNRRIQ GFGNSNYEPPPEDKKSFLSEVVGLGSASIKQGLSNFAQGHSSRKNGTSSHRGINLQRSLTTEME YDNRYEPVEYGRETLGTSKSTTSGTWNQDSRVSNGSPSSGSSESKTREDRLLDTIATAGGVRLQ PTRDSIQAFLVEAVKLDALALSNALETKLKSPSWQVRFKALCILESIVRRNDDDQFSIVTSYFS ENQEAVIGCSESPQASLREKATKVMPLLDGGKGVPSINVYEKSLPSNTSSTIQMPDLIDTSDAG DFSGTNKSVEVENLSSTPLVDDLFGDGLNTVTSTSELKNDDDPFSDVSFHTIETRENPDDLFSG MNFDNNQVSNENKKAALEPKNEPGVFDIFGSSSEPAVQEHARKDVNDLMSGLSIHEDILKGKDK GDSKDSLSESLFSASAQPNHQNQVSQDSLNGIYSSPMAGSNMNAAFFPGMTYLPSGMVFNPAFS SQPMAYAATGNFFTQQQLLSAMSNYQQFGNPNLQSNSGGGGVGSGGYSSPFPDIFQPNLAAQSS TSVMNSSKKEDTRAFDFISALRLIKYAVGKSGVEFRREMQRNSVAVRQLFHYKGQPDPLKGDAL NKAVRDTAHEAISSIFAEEDNKPAPSENLNRRIQGFGNSNYEPPPEDKKSFLSEVVGLGSASIK QGLSNFAQGHSSRKNGTSSHRGINLQRSLTTEMEYDNRYEPVEYGRETLGTSKSTTSGTWNQDS RVSNGSPSSGSSESKTREDRLLDTIATAGGVRLQPTRDSIQAFLVEAVKLDALALSNALETKLK SPSWQVRFKALCILESIVRRNDDDQFSIVTSYFSENQEAVIGCSESPQASLREKATKVMPLLDG GKGVPSINVYEKSLPSNTSSTIQMPDLIDTSDAGDFSGTNKSVEVENLSSTPLVDDLFGDGLNT VTSTSELKNDDDPFSDVSFHTIETRENPDDLFSGMNFDNNQVSNENKKAALEPKNEPGVFDIFG SSSEPAVQEHARKDVNDLMSGLSIHEDILKGKDKGDSKDSLSESLFSASAQPNHQNQVSQDSLN GIYSSPMAGSNMNAAFFPGMTYLPSGMVFNPAFSSQPMAYAATGNFFTQQQLLSAMSNYQQFGN PNLQSNSGGGGVGSGGYSSPFPDIFQPNLAAQSSTSVMNSSKKEDTRAFDFIS
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						He et al., 2020

circRNA

Detail information of Csa3G462690_circ_g.2

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