Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d045516_circ_g.6 |
ID in PlantcircBase | zma_circ_009881 |
Alias | zma_circ_0003171 |
Organism | Zea mays |
Position | chr9: 25249199-25249502 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d045516 |
Parent gene annotation |
Probable transcriptional regulator SLK2 |
Parent gene strand | + |
Alternative splicing | Zm00001d045516_circ_g.4 Zm00001d045516_circ_g.5 |
Support reads | NA |
Tissues | leaf, root |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | Zm00001d045516_T008:1 Zm00001d045516_T015:1 Zm00001d045516_T001:1 Zm00001d045516_T003:1 Zm00001d045516_T012:1 Zm00001d045516_T019:1 Zm00001d045516_T004:1 Zm00001d045516_T014:1 Zm00001d045516_T013:1 Zm00001d045516_T010:1 Zm00001d045516_T006:1 Zm00001d045516_T005:1 Zm00001d045516_T022:1 Zm00001d045516_T021:1 Zm00001d045516_T023:1 Zm00001d045516_T018:1 Zm00001d045516_T011:1 Zm00001d045516_T020:1 Zm00001d045516_T002:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.094846491 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ma et al., 2021b |