Splice junction sequence |
TCTGATGAATAAACATGGTTGATGTCAATGAGCAGACGATTGGATCAGCTTGGACTGAACACGT ACTATTTTCTGACTGCAAGTCCAAGGAGAGTAACAAtcttcagctatgcatcaagtaattagaa tgcaagaagaacatggaaatgaaggaatcttgaatatcatcatttcgcctctgcaaagtttcag agatatta
|
Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
|
Full-length trsnacripts |
Transcript length: 584 Transcript exons: 21653643-21653747,21654588-21654686,21654782-21655052,21 655601-21655709 TCTTCAGCTATGCATCAAGTAATTAGAATGCAAGAAGAACATGGAAATGAAGGAATCTTGAATA TCATCATTTCGCCTCTGCAAAGTTTCAGAGATATTAATGATTAAATTGGTGTTAGCTGAAAGTA AGAGGAACGAGCACCTAAGAACTATAGGAATGGGAGGCATCAGGAAAATCATCAGACCAAATCT CCAATACCAGAGCTACAAGAAACAGAAGCTTGAACATTTTCTTCAGAGTACTAGAGTATATATA GACCTATGCAGTGCAGGGCTGTGAAGGATAAATGAATTGAATCTGGTAGATGGTGCACAATAGG ACACTGAAGTGAATGATCACATATATTGGCCAAGAAACATGTACAAGTCACTGTACAACATCTG CAGGGATGTGATCTTCTGGGTACATCAGAAAGCTGATTGACATAATGAAGAGTAAGCAGAGAAC AGTGCAGACACTTGGGATCTTTTGAGAGGACTGGATTCTGATGAATAAACATGGTTGATGTCAA TGAGCAGACGATTGGATCAGCTTGGACTGAACACGTACTATTTTCTGACTGCAAGTCCAAGGAG AGTAACAA
|
Genomic sequence |
TCTTCAGCTATGCATCAAGTAATTAGAATGCAAGAAGAACATGGAAATGAAGGAATCTTGAATA TCATCATTTCGCCTCTGCAAAGTTTCAGAGATATTAATGATGTAAGTATTTTATTTAATTTTTA GTGAGGCATATATATAGGTGCTGCCATTCCCTTTCTGATTGAGAATTAAAAGGTGCATATAGAT GCTAATATATGTTTTGTCCAATTCTTTGTTATGTTCATGTGATGGGGAGTATCTCAGTAGTGTC GTTCAATCCATTCGGATCATTTTGCATATTATAGATGCTAAGTGCTTAGTGCTGATATATACTC CATAAATGATATAGAGTTTATATAAAATAAACAGCATACACGCATGTCTCTATGCTGAGCTGCT TAGTTACATCATGTGCATTTGTGCTCTCTTATCTATCTTGACTATGGGTTCATCACTGAAGAAC TAGTGATGAGTATGTGCCATTTCTGGATCAAAGAGAAGTAGTGTCATTTAGATGTTATCAAGTA TGAATACAGTTTCAAACTAGTAGGGAATGTGGAATTTTTAGACATGTTTAGGAGTGCAGGATTT TTTTAATTGAACCATCTCTCTGAAACGTTAGATAATTAGAGCCCAATTTCTATGCACTACACTC CATTTTCTCTTGTTCTTCATGATTCACTCTAAAATGTCCATTTTCCAGTGTCCCCCTTTTGTTT TCTCTGCGGAAACAATTGAGCAAGTCAAAAGGAAGAGGAAGGAGTGATTAAGAATAATAGGAAT GGGAGGCATTGGGAAACACTCAGCCAAATTTCCACCTCTATTGTCAGAGATGGAAACTAAAGGT TTAGGTTTCCTCCATGTTCCCATTCCAACCATTCTTAGACCCTCTTTCTTCCTCTTCCCGACTC ACTGCCAAGGCATCTAAATGTGGACATGGATACATTTTGTTTTCTCTAGTAAATTGGTGTTAGC TGAAAGTAAGAGGAACGAGCACCTAAGAACTATAGGAATGGGAGGCATCAGGAAAATCATCAGA CCAAATCTCCAATACCAGAGGTTAGAGCTTAATTTGGCTTTCCTTCATGTTCCCATTCCTACTG CTCTTAGAGTCTCTCTTCCTCTTCCTGGCTCACCCTCTTTTTGGCACACAGCTACAAGAAACAG AAGCTTGAACATTTTCTTCAGAGTACTAGAGTATATATAGACCTATGCAGTGCAGGGCTGTGAA GGATAAATGAATTGAATCTGGTAGATGGTGCACAATAGGACACTGAAGTGAATGATCACATATA TTGGCCAAGAAACATGTACAAGTCACTGTACAACATCTGCAGGGATGTGATCTTCTGGGTACAT CAGAAAGCTGATTGACATAATGAAGAGTAAGCAGAGAACAGTGCAGACACTTGGGATCTTTTGA GAGTAAGAATTCAGAGTGGAGAAAGAGTCAATGTGAATCTGAATTTAAAGTGGATCCTGTGTGA GTGTGGAACATTGCACGTTTCTTTTCTGATACAGATACTTAGCAAAGTTACTTGTACTCAAGTA TTAAGCCGTAGCAACACATATGCTGTAACATTAAATTCACTAATGCTATCTGACAAAATAATCA CCAGGACTTGAATAGCTAAGCAGTTTTGTCAATCTCTCTTTTGGGTGCTTCACTGTCTTTGGAA ACTTAAATGCTCAGGATATAACGGTGATGTGGCCATGTTATAGGTCATATTAACTTCCAAAACG TTTTATCTGACAGTATTAACCTTCAATTTCTCATAGGTTTCATCTATCAAATTTTGCTAGATTT CAGAATAGGCACCTTGTTCTACACTTATACATCTTTTCAGAATGCCCACCTAGTAAATAGTTTT TGCAAGAACAAACGACATGTTTAGAACAAAACACCATCCATACATCAATACCATGTTCACTTTT GCATGCACTGATTAATACATAATTTGTTTGGCTTTCAGGGACTGGATTCTGATGAATAAACATG GTTGATGTCAATGAGCAGACGATTGGATCAGCTTGGACTGAACACGTACTATTTTCTGACTGCA AGTCCAAGGAGAGTAACAA |