Detail information of AT1G74910_circ_g.2


General Information
CircRNA Name AT1G74910_circ_g.2
ID in PlantcircBase ath_circ_010204
Alias NA
Organism Arabidpsis thaliana
Position chr1: 28136066-28136123  JBrowse»
Reference genome TAIR10.38
Type   i-circRNA
Identification method CIRCexplorer
Parent gene AT1G74910
Parent gene annotation ADP-glucose pyrophosphorylase family protein
Parent gene strand -
Alternative splicing AT1G74910_circ_g.1
Support reads 1
Tissues aerial
Exon boundary   No-No
Splicing signals   AT-AC
Number of exons covered 0
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   CTCTTAAGAGATGAGCAGAAGAGGGAAACatttcaaggtccaaaaagaatgagtcagg
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence ATTTCAAGGTCCAAAAAGAATGAGTCAGGCTCTTAAGAGATGAGCAGAAGAGGGAAAC
Conservation Information
Conserved circRNAs NA
PMCS 0.129311494
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Chu et al., 2017