Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d010546_circ_g.1 |
ID in PlantcircBase | zma_circ_002777 |
Alias | circ2753 |
Organism | Zea mays |
Position | chr8: 120075634-120076679 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d010546 |
Parent gene annotation |
Putative SAC3/GANP family protein |
Parent gene strand | - |
Alternative splicing | Zm00001d010546_circ_g.2 Zm00001d010546_circ_g.3 |
Support reads | 8 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d010546_T022:3 Zm00001d010546_T025:3 Zm00001d010546_T018:3 Zm00001d010546_T008:3 Zm00001d010546_T004:3 Zm00001d010546_T006:3 Zm00001d010546_T015:3 Zm00001d010546_T016:3 Zm00001d010546_T023:3 Zm00001d010546_T017:3 Zm00001d010546_T013:3 Zm00001d010546_T019:3 Zm00001d010546_T021:3 Zm00001d010546_T002:3 Zm00001d010546_T007:3 Zm00001d010546_T001:3 Zm00001d010546_T005:3 Zm00001d010546_T003:3 Zm00001d010546_T012:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.09607825 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |