Plant Circular RNA Database

Detail information of Zm00001d052050_circ_g.3

			
						 General Information
					
						CircRNA Name
						Zm00001d052050_circ_g.3
					
						ID in PlantcircBase
						zma_circ_008161
					
						Alias
						zma_circ_0001602
					
						Organism
						
							Zea mays						
					
						Position
						
							chr4: 177646013-177650090  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Zm00001d052050						
					
						Parent gene annotation
						
							Nudix hydrolase 3
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d052050_circ_g.2 Zm00001d052050_circ_g.4 Zm00001d052050_circ_g.5 						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d052050_T002:6
Zm00001d052050_T003:6
Zm00001d052050_T001:5
Zm00001d052050_T009:3
Zm00001d052050_T005:6
Zm00001d052050_T008:6
Zm00001d052050_T004:6
Zm00001d052050_T007:6

General Information
CircRNA Name	Zm00001d052050_circ_g.3
ID in PlantcircBase	zma_circ_008161
Alias	zma_circ_0001602
Organism	Zea mays
Position	chr4: 177646013-177650090 JBrowse»
Reference genome	AGPv4.38
Type	ue-circRNA
Identification method	find_circ
Parent gene	Zm00001d052050
Parent gene annotation	Nudix hydrolase 3
Parent gene strand	-
Alternative splicing	Zm00001d052050_circ_g.2 Zm00001d052050_circ_g.4 Zm00001d052050_circ_g.5
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d052050_T002:6 Zm00001d052050_T003:6 Zm00001d052050_T001:5 Zm00001d052050_T009:3 Zm00001d052050_T005:6 Zm00001d052050_T008:6 Zm00001d052050_T004:6 Zm00001d052050_T007:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AATCCCCTTCCATCCTGAAACTGGTTTGGTGGCTTCTGTGAGTAATTGCACAGCAGAATCTGCG
GTCGATAGAAAAGCCTTATTTTCATCAAGGCAGGACcccagcattgtagagaagattgatcaca
cgaataggagcagcagatatactatctgatttgaaaatattgtccattggaaggtttttctcca
aatcctga

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 679
Transcript exons: 177646013-177646108,177646177-177646254,177649334-177649
424,177649501-177649742,177649919-177650090
CCCAGCATTGTAGAGAAGATTGATCACACGAATAGGAGCAGCAGATATACTATCTGATTTGAAA
ATATTGTCCATTGGAAGGTTTTTCTCCAAATCCTGGAGCTGATCACCAAAGAGTTTAACTTGAG
AAGTTGCTGTGTCATCACGTATTCCGACAAATGCTTCAAAAGTTGCAATACTAACCAATTCCAT
CCAAGCTATATCGGATTCATAGTAATCATTTGAAAGGAAAGCATTCGCCTTGGTTCTCAGCAAA
TTCTTGAGGCTTGGAGAATCAGAGCACGCTGATGCTTTCTCAAGAAGCTCAGCTGCTTTCTCTA
GGAATGGTCTATACTCCTTGGAGTATGGAACAATAAAAAGATCATCTTTAGTCTTGGTCTGATC
CGATCCATCTGATTGTGTTAATGACGATGAAGACAGAGAGTCATGTCGTTTTATGACGGTGAAA
AACCCAGTGGCATCATTTTGTTCTTTATCTGTCAGTTTACTCTTCCAAAGTTCAAACTCCGCTT
TGTCCATGTCAGGAGGATAGAAGTTAGCACCGGGAGGCTTATGTAGAGGAAATGCTGCTCGATA
CTCAATCCCCTTCCATCCTGAAACTGGTTTGGTGGCTTCTGTGAGTAATTGCACAGCAGAATCT
GCGGTCGATAGAAAAGCCTTATTTTCATCAAGGCAGGAC
						
					

						Genomic sequence
						
							CCCAGCATTGTAGAGAAGATTGATCACACGAATAGGAGCAGCAGATATACTATCTGATTTGAAA
ATATTGTCCATTGGAAGGTTTTTCTCCAAATCCTGAACTCAGATCAAATTTGATGTAAAGCAAA
GCTTAATACTTTCTTAGAGAAATTTAATGGGATTACCTGGAGCTGATCACCAAAGAGTTTAACT
TGAGAAGTTGCTGTGTCATCACGTATTCCGACAAATGCTTCAAAAGTTGCCTATTGGAAATGGT
ATATATAAAATGCAAGTGACAAAGCAATTAAAAATTGTATTAAACTCCATGTGTATTATGCAGA
ACAAACCTAATTCAGATCCTTAAAAATGTACAACCTGATCATTATATAAAATTATAGATAAAGT
TCTAAGGGGGTGTTTGAATGCACTAGAACTAATAGTTAGTTGACTAAAAATTGCTAGTGGAATT
AGCTAGCTAACAAATAGCTAGTTAACTATTAACTAATTTACTAAAAATAATATTAGCTCTAGCG
CATTCAAACACCCCCTAAAGCACATAATATTTGCCTAACCGGGAAAACAGTATTGAGCACATAT
CAAATTGCAGAATTAATAAACAGAAGTTAAATATAAATTAATATCTCATGACCCAACAATATTT
TTAAGACTTGCAGCATATCAAGAGAGACCAATATTAAGTTGTTAAAATGAAAATCTAGCTGGGA
ACAAGGTTGAAAATAAATGGTAGCTGAAAGCTGAGTTCAGTGCATCAGTGAAATGAACTTAAAG
AGTGCTCCAAAGAGAATAAAATTCAAAACTGCGTGTGACAAAAATGACTTAAGCATCAGACTTG
ATAAATAAATTGAGATGCCACAAACAAGTGGGGAGATACCGTGAAAAATACCTTATAACTAAAA
AGGCTATCTTCATATGTTTCATATGGGCCAATTGTGAGATCTAAGTTGGAGTCCTGCATAAAGG
ACAAGAATGCCAAACATAGGTAATATATAGAAAGAACTTTTTTTATCGAACGCGCAGGAGAACT
GCGCATCTTATATATTAGAGAGGAATAAAAACCTTACAAAAAGGAGATGTTGCTGAGCAAGTCT
CCCAAGGACACTACATAAACCCAAAGGGAATTACAAACTGGTACCGTAACTTGACCCGACCTCG
CCCAGAGCTGCAACTAAGCCAAGGCTCTCAAGCTCCTTAGCTCTTGCTATTGCCCAGCTAACAC
ACTCATCTGAGAAACATCTAAAAATTCTAGGTAAGGATGGAGACTCCCCATGAAACACTGCTCT
GTTTCTCTGAAGCCATAGGCACCAAGCTCCCAGGATGATCAAAGAGTTAAGCCCCTTTTTCCTG
GTCTTGATAACCCTTAGGCTCACCTTTCCCCACCAGTCTGCAAATGACTCCTCATCAGCTGCCG
GAGTGAGGTGCCCCAAGCCAAAAACAGCAAGAACTTTGTGCCAAAATTGCCAGGCAAAAATGCA
CGCAGTAAGGAGGTGATGAATTGTCTCTTGGGCTTGATCACACATGCTACTGCTAAGTAATGAG
AGTATTGACATAAGCAAATTTTCACTCTCTCGTTTTATGTTTATATAATATAGAGAAATAACAT
TATTATGCTCTTTTTTCACTATGTTGTAGTATCTTTAAATGCGAGGAGTTACTAGTGACCAATA
TCTATATAGTTTGACTATGTGCTAGACCTGTTCAAACGTTGGGTCGCGTTCAGGCAAAGAAATA
TGGTTGGGTCAAAATCTTAGGCCTGAGACTGACCCGGTGCATTGGTGGACCGGCTTGGCAATTT
CTTAGGTTTTCACGCTTTGGGTCAGGCCATGGGTCTTTCCCTCCCCGGCCGAGTTTTTTTTTGG
TCAGGCCAAGGGCTGAAAATCATGACCCAGGTCCGACCAGGCACACTGGCAGGTCGGGCCCCAT
GATCATGTCTACTATGAGCAAACAAACTGTCTCTTATTTGTGATCGGACGGATTATGCCACATT
AGCCTGTTTTGTAAATAATTTTTTTTAGGAAATTGTTGGCTTCGGTAATCTTTCCACAATCTGA
GATGAAACTTATGGAATAAGAGATTTTTTCCTAGAACATGCATGAGAGCTTCACATCATTATAT
TAAGAAAACAAGCTAAAAGGACGCAAACAAGTCTGTTAAGGCAAGGTTCCAAAACAAGAGAAAA
AGATTCAAAAGGAAAACTCAGAGCTTTCATATGGGGTACTCAGGTAAAATATACTTGACATATT
TGATTTTGCATGATCTTCGATCACTAACTTCTTCTAGAATATATTCTTAGAATCATTCAAAAAA
AACTCAACCGGGGAGGGAATGACCGCGCTCCCGGTATTAATGCTAAGGGTTGGCACTCAAGGAT
GCACACAACCCACTGATGGCTAAGAAGAGACCGAAACATTGGTCCTGACCAAGAAAATAACCGA
ACCCTGGCCTCTCATCACTAATAGGCCGGCGTCACCCGTTTATTCTGCAATGGCGCAACCAAAG
GATGGCGCACAGGACATCGTAACCCGAGTGCGGATGAGACACAGCAGGTTTTTTAACCAAGCAG
GAAAATTCGCCCCCGAGGGGAATCAAACCCGGGACTTGGAGGTGCTACTCGGAAGCCCTTAACT
ACTAGGCTAGAGGCCCTTTCGCTCTTAGAATCATTCAAAATAAAGAGATTTTGGAAATACTTTG
AATGTAAATATATATATATATATATATATATATTAAAAACTCAACCTGCATGGGTTAAGATAGT
CCCCAGACATTGCATTAAGAATAAGACCTCGTGTAGTTAAAGAAAATTGCCTCACCCATACATA
GCGGTACAGTAGCCATGTGAGAATGACCATGACCAAAGCCAAGTCTTAGGTATGGGACAGACAA
GAAATTTTTTTTAAAAAAATCTAGCCTGAAATTCGCTCTCACGCGAAGTCGAACCAGAAGAAGT
GCTACTCAAGCCATCTAATCGACTCAGCTAGAGGCCCTTTCTCTAAATCTACACATATAGCATA
CAAGTTTCTAAACTAACTATAATAGTTATATTTGTAGTTTTTAAGGTTTGATAAAGTCTTGTCC
AAAACAGATTGTTTTTGTCATTGAAGGGTGTAAGAGATCTTACAGGGTTCATGAATCATTTAGT
TATGCTTAGACAATAATCACTACAGCTCACCATTCCATATCATGATTGGAGTTATAGAAGGCAG
GAGAGAGAGTAACAACTAGAAATTTACCATAGAGCAGAAGAATCAAGGTCAGTGGTGTGTTCTT
ATATCATATGAACAGAGCTGAGAAGTTATACAAAATATATGGACTAAAAAGAAATACAATACTA
ACCAATTCCATCCAAGCTATATCGGATTCATAGTAATCATTTGAAAGGAAAGCATTCGCCTTGG
TTCTCAGCAAATTCTTGAGGCTGCAGCAAGACAAACCAAATGAATCTTCGCAAAAACAAACTAG
AAATTCAGAAACAAAACACCATAATAGCTTACCTTGGAGAATCAGAGCACGCTGATGCTTTCTC
AAGAAGCTCAGCTGCTTTCTCTAGGAATGGTCTATACTCCTTGGAGTATGGAACAATAAAAAGA
TCATCTTTAGTCTTGGTCTGATCCGATCCATCTGATTGTGTTAATGACGATGAAGACAGAGAGT
CATGTCGTTTTATGACGGTGAAAAACCCAGTGGCATCATTTTGTTCTTTATCTGTCAGTTTACT
CTTCCAAAGTTCAAACTCCTACAGCCATACAAAAAGTATGCAAAAATGAAATTGCTTCAGCTAG
CACCGAATAAACTATGCACAAAATGTACATAGTTCTCATAAGCAGACAGCACACAGAAATCTGT
GATTTCTGGTATGAACAGGAAGTTCCCTCTGCATGTGTGAGGAGGGGGGAGAACAGCTTAATGT
ACCGCTTTGTCCATGTCAGGAGGATAGAAGTTAGCACCGGGAGGCTTATGTAGAGGAAATGCTG
CTCGATACTCAATCCCCTTCCATCCTGAAACTGGTTTGGTGGCTTCTGTGAGTAATTGCACAGC
AGAATCTGCGGTCGATAGAAAAGCCTTATTTTCATCAAGGCAGGAC
						
					

			
		

Sequences
Splice junction sequence	AATCCCCTTCCATCCTGAAACTGGTTTGGTGGCTTCTGTGAGTAATTGCACAGCAGAATCTGCG GTCGATAGAAAAGCCTTATTTTCATCAAGGCAGGACcccagcattgtagagaagattgatcaca cgaataggagcagcagatatactatctgatttgaaaatattgtccattggaaggtttttctcca aatcctga
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 679 Transcript exons: 177646013-177646108,177646177-177646254,177649334-177649 424,177649501-177649742,177649919-177650090 CCCAGCATTGTAGAGAAGATTGATCACACGAATAGGAGCAGCAGATATACTATCTGATTTGAAA ATATTGTCCATTGGAAGGTTTTTCTCCAAATCCTGGAGCTGATCACCAAAGAGTTTAACTTGAG AAGTTGCTGTGTCATCACGTATTCCGACAAATGCTTCAAAAGTTGCAATACTAACCAATTCCAT CCAAGCTATATCGGATTCATAGTAATCATTTGAAAGGAAAGCATTCGCCTTGGTTCTCAGCAAA TTCTTGAGGCTTGGAGAATCAGAGCACGCTGATGCTTTCTCAAGAAGCTCAGCTGCTTTCTCTA GGAATGGTCTATACTCCTTGGAGTATGGAACAATAAAAAGATCATCTTTAGTCTTGGTCTGATC CGATCCATCTGATTGTGTTAATGACGATGAAGACAGAGAGTCATGTCGTTTTATGACGGTGAAA AACCCAGTGGCATCATTTTGTTCTTTATCTGTCAGTTTACTCTTCCAAAGTTCAAACTCCGCTT TGTCCATGTCAGGAGGATAGAAGTTAGCACCGGGAGGCTTATGTAGAGGAAATGCTGCTCGATA CTCAATCCCCTTCCATCCTGAAACTGGTTTGGTGGCTTCTGTGAGTAATTGCACAGCAGAATCT GCGGTCGATAGAAAAGCCTTATTTTCATCAAGGCAGGAC
Genomic sequence	CCCAGCATTGTAGAGAAGATTGATCACACGAATAGGAGCAGCAGATATACTATCTGATTTGAAA ATATTGTCCATTGGAAGGTTTTTCTCCAAATCCTGAACTCAGATCAAATTTGATGTAAAGCAAA GCTTAATACTTTCTTAGAGAAATTTAATGGGATTACCTGGAGCTGATCACCAAAGAGTTTAACT TGAGAAGTTGCTGTGTCATCACGTATTCCGACAAATGCTTCAAAAGTTGCCTATTGGAAATGGT ATATATAAAATGCAAGTGACAAAGCAATTAAAAATTGTATTAAACTCCATGTGTATTATGCAGA ACAAACCTAATTCAGATCCTTAAAAATGTACAACCTGATCATTATATAAAATTATAGATAAAGT TCTAAGGGGGTGTTTGAATGCACTAGAACTAATAGTTAGTTGACTAAAAATTGCTAGTGGAATT AGCTAGCTAACAAATAGCTAGTTAACTATTAACTAATTTACTAAAAATAATATTAGCTCTAGCG CATTCAAACACCCCCTAAAGCACATAATATTTGCCTAACCGGGAAAACAGTATTGAGCACATAT CAAATTGCAGAATTAATAAACAGAAGTTAAATATAAATTAATATCTCATGACCCAACAATATTT TTAAGACTTGCAGCATATCAAGAGAGACCAATATTAAGTTGTTAAAATGAAAATCTAGCTGGGA ACAAGGTTGAAAATAAATGGTAGCTGAAAGCTGAGTTCAGTGCATCAGTGAAATGAACTTAAAG AGTGCTCCAAAGAGAATAAAATTCAAAACTGCGTGTGACAAAAATGACTTAAGCATCAGACTTG ATAAATAAATTGAGATGCCACAAACAAGTGGGGAGATACCGTGAAAAATACCTTATAACTAAAA AGGCTATCTTCATATGTTTCATATGGGCCAATTGTGAGATCTAAGTTGGAGTCCTGCATAAAGG ACAAGAATGCCAAACATAGGTAATATATAGAAAGAACTTTTTTTATCGAACGCGCAGGAGAACT GCGCATCTTATATATTAGAGAGGAATAAAAACCTTACAAAAAGGAGATGTTGCTGAGCAAGTCT CCCAAGGACACTACATAAACCCAAAGGGAATTACAAACTGGTACCGTAACTTGACCCGACCTCG CCCAGAGCTGCAACTAAGCCAAGGCTCTCAAGCTCCTTAGCTCTTGCTATTGCCCAGCTAACAC ACTCATCTGAGAAACATCTAAAAATTCTAGGTAAGGATGGAGACTCCCCATGAAACACTGCTCT GTTTCTCTGAAGCCATAGGCACCAAGCTCCCAGGATGATCAAAGAGTTAAGCCCCTTTTTCCTG GTCTTGATAACCCTTAGGCTCACCTTTCCCCACCAGTCTGCAAATGACTCCTCATCAGCTGCCG GAGTGAGGTGCCCCAAGCCAAAAACAGCAAGAACTTTGTGCCAAAATTGCCAGGCAAAAATGCA CGCAGTAAGGAGGTGATGAATTGTCTCTTGGGCTTGATCACACATGCTACTGCTAAGTAATGAG AGTATTGACATAAGCAAATTTTCACTCTCTCGTTTTATGTTTATATAATATAGAGAAATAACAT TATTATGCTCTTTTTTCACTATGTTGTAGTATCTTTAAATGCGAGGAGTTACTAGTGACCAATA TCTATATAGTTTGACTATGTGCTAGACCTGTTCAAACGTTGGGTCGCGTTCAGGCAAAGAAATA TGGTTGGGTCAAAATCTTAGGCCTGAGACTGACCCGGTGCATTGGTGGACCGGCTTGGCAATTT CTTAGGTTTTCACGCTTTGGGTCAGGCCATGGGTCTTTCCCTCCCCGGCCGAGTTTTTTTTTGG TCAGGCCAAGGGCTGAAAATCATGACCCAGGTCCGACCAGGCACACTGGCAGGTCGGGCCCCAT GATCATGTCTACTATGAGCAAACAAACTGTCTCTTATTTGTGATCGGACGGATTATGCCACATT AGCCTGTTTTGTAAATAATTTTTTTTAGGAAATTGTTGGCTTCGGTAATCTTTCCACAATCTGA GATGAAACTTATGGAATAAGAGATTTTTTCCTAGAACATGCATGAGAGCTTCACATCATTATAT TAAGAAAACAAGCTAAAAGGACGCAAACAAGTCTGTTAAGGCAAGGTTCCAAAACAAGAGAAAA AGATTCAAAAGGAAAACTCAGAGCTTTCATATGGGGTACTCAGGTAAAATATACTTGACATATT TGATTTTGCATGATCTTCGATCACTAACTTCTTCTAGAATATATTCTTAGAATCATTCAAAAAA AACTCAACCGGGGAGGGAATGACCGCGCTCCCGGTATTAATGCTAAGGGTTGGCACTCAAGGAT GCACACAACCCACTGATGGCTAAGAAGAGACCGAAACATTGGTCCTGACCAAGAAAATAACCGA ACCCTGGCCTCTCATCACTAATAGGCCGGCGTCACCCGTTTATTCTGCAATGGCGCAACCAAAG GATGGCGCACAGGACATCGTAACCCGAGTGCGGATGAGACACAGCAGGTTTTTTAACCAAGCAG GAAAATTCGCCCCCGAGGGGAATCAAACCCGGGACTTGGAGGTGCTACTCGGAAGCCCTTAACT ACTAGGCTAGAGGCCCTTTCGCTCTTAGAATCATTCAAAATAAAGAGATTTTGGAAATACTTTG AATGTAAATATATATATATATATATATATATATTAAAAACTCAACCTGCATGGGTTAAGATAGT CCCCAGACATTGCATTAAGAATAAGACCTCGTGTAGTTAAAGAAAATTGCCTCACCCATACATA GCGGTACAGTAGCCATGTGAGAATGACCATGACCAAAGCCAAGTCTTAGGTATGGGACAGACAA GAAATTTTTTTTAAAAAAATCTAGCCTGAAATTCGCTCTCACGCGAAGTCGAACCAGAAGAAGT GCTACTCAAGCCATCTAATCGACTCAGCTAGAGGCCCTTTCTCTAAATCTACACATATAGCATA CAAGTTTCTAAACTAACTATAATAGTTATATTTGTAGTTTTTAAGGTTTGATAAAGTCTTGTCC AAAACAGATTGTTTTTGTCATTGAAGGGTGTAAGAGATCTTACAGGGTTCATGAATCATTTAGT TATGCTTAGACAATAATCACTACAGCTCACCATTCCATATCATGATTGGAGTTATAGAAGGCAG GAGAGAGAGTAACAACTAGAAATTTACCATAGAGCAGAAGAATCAAGGTCAGTGGTGTGTTCTT ATATCATATGAACAGAGCTGAGAAGTTATACAAAATATATGGACTAAAAAGAAATACAATACTA ACCAATTCCATCCAAGCTATATCGGATTCATAGTAATCATTTGAAAGGAAAGCATTCGCCTTGG TTCTCAGCAAATTCTTGAGGCTGCAGCAAGACAAACCAAATGAATCTTCGCAAAAACAAACTAG AAATTCAGAAACAAAACACCATAATAGCTTACCTTGGAGAATCAGAGCACGCTGATGCTTTCTC AAGAAGCTCAGCTGCTTTCTCTAGGAATGGTCTATACTCCTTGGAGTATGGAACAATAAAAAGA TCATCTTTAGTCTTGGTCTGATCCGATCCATCTGATTGTGTTAATGACGATGAAGACAGAGAGT CATGTCGTTTTATGACGGTGAAAAACCCAGTGGCATCATTTTGTTCTTTATCTGTCAGTTTACT CTTCCAAAGTTCAAACTCCTACAGCCATACAAAAAGTATGCAAAAATGAAATTGCTTCAGCTAG CACCGAATAAACTATGCACAAAATGTACATAGTTCTCATAAGCAGACAGCACACAGAAATCTGT GATTTCTGGTATGAACAGGAAGTTCCCTCTGCATGTGTGAGGAGGGGGGAGAACAGCTTAATGT ACCGCTTTGTCCATGTCAGGAGGATAGAAGTTAGCACCGGGAGGCTTATGTAGAGGAAATGCTG CTCGATACTCAATCCCCTTCCATCCTGAAACTGGTTTGGTGGCTTCTGTGAGTAATTGCACAGC AGAATCTGCGGTCGATAGAAAAGCCTTATTTTCATCAAGGCAGGAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.109889449

Conservation Information
Conserved circRNAs	NA
PMCS	0.109889449

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							177649932-177650081(-)
177646022-177650081(-)
						
						Potential amino acid sequence
						
							MDKAEFELWKSKLTDKEQNDATGFFTVIKRHDSLSSSSLTQSDGSDQTKTKDDLFIVPYSKEYR
PFLEKAAELLEKASACSDSPSLKNLLRTKANAFLSNDYYESDIAWMELVSIATFEAFVGIRDDT
ATSQVKLFGDQLQDLEKNLPMDNIFKSDSISAAPIRVINLLYNAGVLP*(-)
MLGSCLDENKAFLSTADSAVQLLTEATKPVSGWKGIEYRAAFPLHKPPGANFYPPDMDKAEFEL
WKSKLTDKEQNDATGFFTVIKRHDSLSSSSLTQSDGSDQTKTKDDLFIVPYSKEYRPFLEKAAE
LLEKASACSDSPSLKNLLRTKANAFLSNDYYESDIAWMELVSIATFEAFVGIRDDTATSQVKLF
GDQLQDLEKNLPMDNIFKSDSISAAPIRVINLLYNAGVLP*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	177649932-177650081(-) 177646022-177650081(-)
Potential amino acid sequence	MDKAEFELWKSKLTDKEQNDATGFFTVIKRHDSLSSSSLTQSDGSDQTKTKDDLFIVPYSKEYR PFLEKAAELLEKASACSDSPSLKNLLRTKANAFLSNDYYESDIAWMELVSIATFEAFVGIRDDT ATSQVKLFGDQLQDLEKNLPMDNIFKSDSISAAPIRVINLLYNAGVLP(-) MLGSCLDENKAFLSTADSAVQLLTEATKPVSGWKGIEYRAAFPLHKPPGANFYPPDMDKAEFEL WKSKLTDKEQNDATGFFTVIKRHDSLSSSSLTQSDGSDQTKTKDDLFIVPYSKEYRPFLEKAAE LLEKASACSDSPSLKNLLRTKANAFLSNDYYESDIAWMELVSIATFEAFVGIRDDTATSQVKLF GDQLQDLEKNLPMDNIFKSDSISAAPIRVINLLYNAGVLP(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d052050_circ_g.3

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