Plant Circular RNA Database

Detail information of Zm00001d004659_circ_g.2

			
						 General Information
					
						CircRNA Name
						Zm00001d004659_circ_g.2
					
						ID in PlantcircBase
						zma_circ_007257
					
						Alias
						zma_circ_0000782
					
						Organism
						
							Zea mays						
					
						Position
						
							chr2: 126973801-126978043  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Zm00001d004659						
					
						Parent gene annotation
						
							Ubiquitin carboxyl-terminal hydrolase 5
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d004659_circ_g.1 						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d004659_T010:6
Zm00001d004659_T011:6
Zm00001d004659_T001:6
Zm00001d004659_T004:6
Zm00001d004659_T002:6
Zm00001d004659_T005:6
Zm00001d004659_T006:6
Zm00001d004659_T013:6
Zm00001d004659_T003:6
Zm00001d004659_T009:6
Zm00001d004659_T012:6
Zm00001d004659_T007:6
Zm00001d004659_T008:6
Zm00001d004659_T014:6

General Information
CircRNA Name	Zm00001d004659_circ_g.2
ID in PlantcircBase	zma_circ_007257
Alias	zma_circ_0000782
Organism	Zea mays
Position	chr2: 126973801-126978043 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	find_circ
Parent gene	Zm00001d004659
Parent gene annotation	Ubiquitin carboxyl-terminal hydrolase 5
Parent gene strand	-
Alternative splicing	Zm00001d004659_circ_g.1
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d004659_T010:6 Zm00001d004659_T011:6 Zm00001d004659_T001:6 Zm00001d004659_T004:6 Zm00001d004659_T002:6 Zm00001d004659_T005:6 Zm00001d004659_T006:6 Zm00001d004659_T013:6 Zm00001d004659_T003:6 Zm00001d004659_T009:6 Zm00001d004659_T012:6 Zm00001d004659_T007:6 Zm00001d004659_T008:6 Zm00001d004659_T014:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GAGAAAGCTTCATTTTGAATGGTCTAGGTGAAACAGGGGCACGTCCTCCAGGAGCCCAGAGTTT
TCTCAATAGCTCACCAAAAGCTAATGCAAGTTCACCcttaatgtgtgcagtataatgtccactt
gccatgttgccataatgattgctcacagcatacagctcatagatctggcgctctgaagtcttct
tattggca

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1482
Transcript exons: 126973801-126974074,126975088-126975573,126975756-126975
904,126975996-126976253,126977379-126977549,126977900-12
6978043
CTTAATGTGTGCAGTATAATGTCCACTTGCCATGTTGCCATAATGATTGCTCACAGCATACAGC
TCATAGATCTGGCGCTCTGAAGTCTTCTTATTGGCAATGTAATTTGTCAAATCCAAGTCATGTA
TTGGAAAATTAACAAAAGTTTCTAGTTTTTGTTTTGTTGACCTACTAAATGAAAATCTCTTTAG
ATGTATGACTAGTACTTCAGGAAGTCTCCACAAATCCAACTTTTTGCTAGCTTGTCTTTGCTCC
TTGCACCTTGGACAGTACCACATGTCTTCAGGTACAAGAGGTTCTTCTCTCAAGAAAGCATCCA
AGCATGCATAGAGTGACAGAGCTTCACCACGGGTTCTCTTCGCAGGCGGAGCATACATAAACAC
CTCTGGAAGGTACTCTAAATGATGAGTGTCTATCTTTTTCAGATCTGCCTTGGGCCAGTTGATA
AAAAATACAGTTGCAAGTGAAGATTGTGGGATCCTGATAGCATCATTTGATTTTTCAATGACTG
TGTTGCTATCATCAACCAACAGAAGCTGACATTTGCTGCTGTCGGTATGATAACTATGAGTTCT
TGTGGAAACAGAACTTTGAACAGCCAAATGCAGAGAGTCCGGATTCCTTAGCACGGGCACAAGC
ATTTTATGGACCAACTCATGGATATCAAAACCCGTGACAATTTCATTGCGAGAAATTTGTGCAA
GAAGAGGAACACCGTACGGTTTCCAAGATGTCAAGCTGTTATTGTTTCCATGGTCCAGATCTTC
ATGACGATGCACAAACTGAATGTAATTCACCCTCTTTTCCAACTTTGGGAGCTTATAAACTGCC
AGATGATCATCATCACTTATTGTAGACAGCTGAAGCACTGGATCATCAATAAAACGGTAGATCT
TATGATTCCGTATCTCAGCAATTAGAAGTTTCTCCCCATTTTTAAGTGAGCATGCAGCACCAAG
GGCTTGTAATAGATCTCTGCACCTACCTTGTTTTGGTACATTCACAGTGAATGGTGTTGGTGGA
ACACTACCATCACAAGAAAACACCACGGCAGTCACGCTCCGGGTTGAGGCAAATTGTAAGGGCA
AGGAAAGATACATGAACGGGTCAAAAGTCACTGAAACCTTCCCACAGACTGGGCAAACCAAAGT
GGACTTGTACTGCCCCTGGCATACATCAACAATGATTGAATTATTTCTGGCAATATGATTTGCC
CAATATTCATCTGCAACTTCTTCATCTGATCTTCCATCAGCATCCCCTGAATTTATGTAAGGTC
TATGCTTCACACGATTCAAATCTTCATGGAGTCCATCCAATAGGAACGCCAACAGCTCCTGTGA
ATCATGCTGGTTGTATCCACTGAACTGAGATGCAAACCGAGAAAGCTTCATTTTGAATGGTCTA
GGTGAAACAGGGGCACGTCCTCCAGGAGCCCAGAGTTTTCTCAATAGCTCACCAAAAGCTAATG
CAAGTTCACC
						
					

						Genomic sequence
						
							CTTAATGTGTGCAGTATAATGTCCACTTGCCATGTTGCCATAATGATTGCTCACAGCATACAGC
TCATAGATCTGGCGCTCTGAAGTCTTCTTATTGGCAATGTAATTTGTCAAATCCAAGTCATGTA
TTGGAAAATTAACAAAAGTTTCTAGTTTTTGTTTTGTTGACCTACTAAATGAAAATCTCTTTAG
ATGTATGACTAGTACTTCAGGAAGTCTCCACAAATCCAACTTTTTGCTAGCTTGTCTTTGCTCC
TTGCACCTTGGACAGTACCTAAAAGAATAGCAAAACTTCATCATCAAATACCTAGAAATGAAGG
CTATAGACATAAGGAAGGAACATTATTCAAGTGCCTGTCCAAACTTTAAACTAATTTCTACAAA
AATCCAAGGTAAGCGAACCATATGCTTCAAAACAGGCTTCTATTTGGTTGCAAGAGACAGAGAA
AGTGGATTATGGAGACCCTTCAGCCAAGTGCTTAGCAAATTAAGAAATGACGGTTAATGTGGGT
GATCACATATAACTGATTTGAGCAAAATAATCATGGGCAAAATATAGAGTAGCATTGCACAGTG
CACATGTTTCAGACCAAAAATCGAAAAGCTGATATGCCACAAAAATGGACCAGATGGACCACAG
GTAAATTTTCAATAAAAATCTGCAAAAGAGACAACCCAATCAAAAATATATTTTTATGGGCCTC
AGTACAGATTCTCAAGGGATCCAGTAAATTTTGAAAATATAACAAAACAAACTCATAAGTTATG
TTTATGTAGTTATAACTCAAGTGCCAGTGCAACCAACATAGTAACCACTAGGAATGAAAACAGG
ACGGATATTTACAGATTTCCATCTTTCGTGAAAGGGTTTAAAGCATGTAGCCTACATGCGTAAT
CTGTATAAGAATCTGGAAATTTAATATCTGTACCATATCCGAATCTGAATAGTCAAACTTGGGT
TTCTAATATGTATGTGGAACTGATATCAATATTAGATGCATCTGACACTACCCAAATCTTTTTT
TTTTCTCGAACACGCAGGAGAGATGTGTATCATTATATTAAAAGTAGAAAGAGACAAGGTCCAA
AATAGACCGGGGTATAGCCACCCATATTTGGTATCTGCAATATCCAATCCAGTTTCATCCTTAC
AGACTACTCAAGGTGTTTGAGCGAGCATCAAGTACCAGTGTACCAGCAAAAATAGACAATATGC
ACCAATGAAGTAACAATCATTTTTTTTGTAAGTGTCAAAAAGTATCTTAGAATGTGGAACTGAA
AACTAACCACATGTCTTCAGGTACAAGAGGTTCTTCTCTCAAGAAAGCATCCAAGCATGCATAG
AGTGACAGAGCTTCACCACGGGTTCTCTTCGCAGGCGGAGCATACATAAACACCTCTGGAAGGT
ACTCTAAATGATGAGTGTCTATCTTTTTCAGATCTGCCTTGGGCCAGTTGATAAAAAATACAGT
TGCAAGTGAAGATTGTGGGATCCTGATAGCATCATTTGATTTTTCAATGACTGTGTTGCTATCA
TCAACCAACAGAAGCTGACATTTGCTGCTGTCGGTATGATAACTATGAGTTCTTGTGGAAACAG
AACTTTGAACAGCCAAATGCAGAGAGTCCGGATTCCTTAGCACGGGCACAAGCATTTTATGGAC
CAACTCATGGATATCAAAACCCGTGACAATTTCATTGCGAGAAATTTGTGCAAGAAGAGGAACA
CCGTACGGTTTCCAAGATGTCAAGCTGTTATTGTTTCCATGGTCCCTACAAATAGTAAAGGATA
ATATTAACAGAAGATGGTGCAAGAAGTATTTATGTTAATCATGTAAACAGCATATTGACATGAC
ACATGTTGAATTCACTTCAATTATAAACTAAGATGACCATTACAGCTGTAATCCTAGCAAGAAG
ATAGACATATATCAGCGTTTTTTGCTTTTTCTTACAGATCTTCATGACGATGCACAAACTGAAT
GTAATTCACCCTCTTTTCCAACTTTGGGAGCTTATAAACTGCCAGATGATCATCATCACTTATT
GTAGACAGCTGAAGCACTGGATCATCAATAAAACGGTAGATCTTATGATTCCGTATCTGTAGAT
AAATTCAACCAAAATGTTTAAGGACACACAATCGTCAAACCTGCCAACCAGTACATTAACTCAA
GTGAGCATTAATGACCAACCTCAGCAATTAGAAGTTTCTCCCCATTTTTAAGTGAGCATGCAGC
ACCAAGGGCTTGTAATAGATCTCTGCACCTACCTTGTTTTGGTACATTCACAGTGAATGGTGTT
GGTGGAACACTACCATCACAAGAAAACACCACGGCAGTCACGCTCCGGGTTGAGGCAAATTGTA
AGGGCAAGGAAAGATACATGAACGGGTCAAAAGTCACTGAAACCTTCCCACAGACTGGGCAAAC
CAAAGTGGACTTGTACTGCCCCTGGAAAAACATAATAAAAGGAAATGTCAGTAAAACATTTGTC
TTAGAATAATTAGGAAAAGAGAACTAAATCATAAGACAAAATATGTCAAATTGCATGCAACATG
CAGATTTATGTGTCCTGTGACAAGTATGCACCTCCAATGTATCGTAGTATGTGTAGGGAAGATA
CACAAGAGTTTATACACATCGTAAGAAACACCCTACACTGGAAAGTACATATATACAGATAAAA
TATACTCCCTCCGTCCCATATTTAGATGTCATTTTAGAAACTCTCACGGAAACCAACGCTGGAG
CCAAAAGACCAAAATGCCCGTCAAGGAGCAGAAATATAAATGTATATTGGGGAAAGAGAAAGGT
GCATTGGAAAGTGAGAAGGTCAAGTACTTTGGAACAAAATTGAATGTTATAAGGCCATCTATTT
TGGGAGGGAGGGAGGGAGTACGTCTAACAAAGCTAATCCTTCAGCATAAAAATAACATATATTC
AGCTCCATGTGTAATGAGGTAGGAAAGGGGGAGAAGGGGGGAACCTTGAGATGAGGAGCTCATC
TCGTCGCTAGTGTTTTGGAGACGTCGCCAGTGTTCTGGAGCTGCTGCTGGTGTTCTAGAGCCGC
AGCCTGTGTTCTGGACTCAGCAGAGGAGAGGAAAAGTTTCAAGGGGTGACAAGGGGTGGTGGCG
CATTGCCTTTATACTACTGTAGATGGGCCGAAAAAATAGAAGCCCAGTAGCCCACTAGAAAACC
CTAGCCGCCTGGACAAATCCTGATCGATTTACCATCTAGTCGGACACTAATCGCCCCTAATCGA
CGACTAGTCGGACGACCTGGACGTGATACTCTAGTCGAGTCGTCCGGCTGATCGGCCACTACCA
GGCGACCTGCCCGACTAATCGTGATTAGTCGGACGACTTGAAAACAGTGCACATCTGCACATCT
AATCACAACAGGAAGATCATAGAAGGGTCTTTACATTACATACAGTAAATGCCTGAAACTGCTA
GCGGTGCTTACAATACCAAGCAAGAGAAACATGATGGTCCCAAATTGCAATGGCTATTAGCATT
TATCTAAAGCCAAAGCATCACAACAGTAAGACAAGTGATTCACAGGTTTAGAACTAACCTGGCA
TACATCAACAATGATTGAATTATTTCTGGCAATATGATTTGCCCAATATTCATCTGCAACTTCT
TCATCTGATCTTCCATCAGCATCCCCTGAATTTATGTAAGGTCTATGCTTCACACGATTCAAAT
CTTCATGGAGTCCATCCAATAGGAACGCCAACAGCTCCTGCAGTATTTTATCAAAGTACAGATT
CAGATCAGAAAAGAAAAAAGACTCAGTTGAGTGAAATGCAACATGGATCCTTAAACTTTCCCCA
CATTCTCATCTTGGCCAATGAACTCTCAAAGTGAATAAGTGATAATCTGGGTCCTTTAACTTTT
CAAGTGGTTCATTCAATGTGTGAATTTAGGTTCATGATTGGGCATAGGCTATCAACCACACAAA
AAATTGAAGGGCACACAATTTTGAGAGTCCATGGACCCTAATGAGAATGTGGAAAAAGTTTAGG
GACCTGCAGTGCATTTCACTCAAAAAAATACAACATAAGATATATCACTCTAAATAGACGATCA
AACCTGTGAATCATGCTGGTTGTATCCACTGAACTGAGATGCAAACCGAGAAAGCTTCATTTTG
AATGGTCTAGGTGAAACAGGGGCACGTCCTCCAGGAGCCCAGAGTTTTCTCAATAGCTCACCAA
AAGCTAATGCAAGTTCACC
						
					

			
		

Sequences
Splice junction sequence	GAGAAAGCTTCATTTTGAATGGTCTAGGTGAAACAGGGGCACGTCCTCCAGGAGCCCAGAGTTT TCTCAATAGCTCACCAAAAGCTAATGCAAGTTCACCcttaatgtgtgcagtataatgtccactt gccatgttgccataatgattgctcacagcatacagctcatagatctggcgctctgaagtcttct tattggca
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1482 Transcript exons: 126973801-126974074,126975088-126975573,126975756-126975 904,126975996-126976253,126977379-126977549,126977900-12 6978043 CTTAATGTGTGCAGTATAATGTCCACTTGCCATGTTGCCATAATGATTGCTCACAGCATACAGC TCATAGATCTGGCGCTCTGAAGTCTTCTTATTGGCAATGTAATTTGTCAAATCCAAGTCATGTA TTGGAAAATTAACAAAAGTTTCTAGTTTTTGTTTTGTTGACCTACTAAATGAAAATCTCTTTAG ATGTATGACTAGTACTTCAGGAAGTCTCCACAAATCCAACTTTTTGCTAGCTTGTCTTTGCTCC TTGCACCTTGGACAGTACCACATGTCTTCAGGTACAAGAGGTTCTTCTCTCAAGAAAGCATCCA AGCATGCATAGAGTGACAGAGCTTCACCACGGGTTCTCTTCGCAGGCGGAGCATACATAAACAC CTCTGGAAGGTACTCTAAATGATGAGTGTCTATCTTTTTCAGATCTGCCTTGGGCCAGTTGATA AAAAATACAGTTGCAAGTGAAGATTGTGGGATCCTGATAGCATCATTTGATTTTTCAATGACTG TGTTGCTATCATCAACCAACAGAAGCTGACATTTGCTGCTGTCGGTATGATAACTATGAGTTCT TGTGGAAACAGAACTTTGAACAGCCAAATGCAGAGAGTCCGGATTCCTTAGCACGGGCACAAGC ATTTTATGGACCAACTCATGGATATCAAAACCCGTGACAATTTCATTGCGAGAAATTTGTGCAA GAAGAGGAACACCGTACGGTTTCCAAGATGTCAAGCTGTTATTGTTTCCATGGTCCAGATCTTC ATGACGATGCACAAACTGAATGTAATTCACCCTCTTTTCCAACTTTGGGAGCTTATAAACTGCC AGATGATCATCATCACTTATTGTAGACAGCTGAAGCACTGGATCATCAATAAAACGGTAGATCT TATGATTCCGTATCTCAGCAATTAGAAGTTTCTCCCCATTTTTAAGTGAGCATGCAGCACCAAG GGCTTGTAATAGATCTCTGCACCTACCTTGTTTTGGTACATTCACAGTGAATGGTGTTGGTGGA ACACTACCATCACAAGAAAACACCACGGCAGTCACGCTCCGGGTTGAGGCAAATTGTAAGGGCA AGGAAAGATACATGAACGGGTCAAAAGTCACTGAAACCTTCCCACAGACTGGGCAAACCAAAGT GGACTTGTACTGCCCCTGGCATACATCAACAATGATTGAATTATTTCTGGCAATATGATTTGCC CAATATTCATCTGCAACTTCTTCATCTGATCTTCCATCAGCATCCCCTGAATTTATGTAAGGTC TATGCTTCACACGATTCAAATCTTCATGGAGTCCATCCAATAGGAACGCCAACAGCTCCTGTGA ATCATGCTGGTTGTATCCACTGAACTGAGATGCAAACCGAGAAAGCTTCATTTTGAATGGTCTA GGTGAAACAGGGGCACGTCCTCCAGGAGCCCAGAGTTTTCTCAATAGCTCACCAAAAGCTAATG CAAGTTCACC
Genomic sequence	CTTAATGTGTGCAGTATAATGTCCACTTGCCATGTTGCCATAATGATTGCTCACAGCATACAGC TCATAGATCTGGCGCTCTGAAGTCTTCTTATTGGCAATGTAATTTGTCAAATCCAAGTCATGTA TTGGAAAATTAACAAAAGTTTCTAGTTTTTGTTTTGTTGACCTACTAAATGAAAATCTCTTTAG ATGTATGACTAGTACTTCAGGAAGTCTCCACAAATCCAACTTTTTGCTAGCTTGTCTTTGCTCC TTGCACCTTGGACAGTACCTAAAAGAATAGCAAAACTTCATCATCAAATACCTAGAAATGAAGG CTATAGACATAAGGAAGGAACATTATTCAAGTGCCTGTCCAAACTTTAAACTAATTTCTACAAA AATCCAAGGTAAGCGAACCATATGCTTCAAAACAGGCTTCTATTTGGTTGCAAGAGACAGAGAA AGTGGATTATGGAGACCCTTCAGCCAAGTGCTTAGCAAATTAAGAAATGACGGTTAATGTGGGT GATCACATATAACTGATTTGAGCAAAATAATCATGGGCAAAATATAGAGTAGCATTGCACAGTG CACATGTTTCAGACCAAAAATCGAAAAGCTGATATGCCACAAAAATGGACCAGATGGACCACAG GTAAATTTTCAATAAAAATCTGCAAAAGAGACAACCCAATCAAAAATATATTTTTATGGGCCTC AGTACAGATTCTCAAGGGATCCAGTAAATTTTGAAAATATAACAAAACAAACTCATAAGTTATG TTTATGTAGTTATAACTCAAGTGCCAGTGCAACCAACATAGTAACCACTAGGAATGAAAACAGG ACGGATATTTACAGATTTCCATCTTTCGTGAAAGGGTTTAAAGCATGTAGCCTACATGCGTAAT CTGTATAAGAATCTGGAAATTTAATATCTGTACCATATCCGAATCTGAATAGTCAAACTTGGGT TTCTAATATGTATGTGGAACTGATATCAATATTAGATGCATCTGACACTACCCAAATCTTTTTT TTTTCTCGAACACGCAGGAGAGATGTGTATCATTATATTAAAAGTAGAAAGAGACAAGGTCCAA AATAGACCGGGGTATAGCCACCCATATTTGGTATCTGCAATATCCAATCCAGTTTCATCCTTAC AGACTACTCAAGGTGTTTGAGCGAGCATCAAGTACCAGTGTACCAGCAAAAATAGACAATATGC ACCAATGAAGTAACAATCATTTTTTTTGTAAGTGTCAAAAAGTATCTTAGAATGTGGAACTGAA AACTAACCACATGTCTTCAGGTACAAGAGGTTCTTCTCTCAAGAAAGCATCCAAGCATGCATAG AGTGACAGAGCTTCACCACGGGTTCTCTTCGCAGGCGGAGCATACATAAACACCTCTGGAAGGT ACTCTAAATGATGAGTGTCTATCTTTTTCAGATCTGCCTTGGGCCAGTTGATAAAAAATACAGT TGCAAGTGAAGATTGTGGGATCCTGATAGCATCATTTGATTTTTCAATGACTGTGTTGCTATCA TCAACCAACAGAAGCTGACATTTGCTGCTGTCGGTATGATAACTATGAGTTCTTGTGGAAACAG AACTTTGAACAGCCAAATGCAGAGAGTCCGGATTCCTTAGCACGGGCACAAGCATTTTATGGAC CAACTCATGGATATCAAAACCCGTGACAATTTCATTGCGAGAAATTTGTGCAAGAAGAGGAACA CCGTACGGTTTCCAAGATGTCAAGCTGTTATTGTTTCCATGGTCCCTACAAATAGTAAAGGATA ATATTAACAGAAGATGGTGCAAGAAGTATTTATGTTAATCATGTAAACAGCATATTGACATGAC ACATGTTGAATTCACTTCAATTATAAACTAAGATGACCATTACAGCTGTAATCCTAGCAAGAAG ATAGACATATATCAGCGTTTTTTGCTTTTTCTTACAGATCTTCATGACGATGCACAAACTGAAT GTAATTCACCCTCTTTTCCAACTTTGGGAGCTTATAAACTGCCAGATGATCATCATCACTTATT GTAGACAGCTGAAGCACTGGATCATCAATAAAACGGTAGATCTTATGATTCCGTATCTGTAGAT AAATTCAACCAAAATGTTTAAGGACACACAATCGTCAAACCTGCCAACCAGTACATTAACTCAA GTGAGCATTAATGACCAACCTCAGCAATTAGAAGTTTCTCCCCATTTTTAAGTGAGCATGCAGC ACCAAGGGCTTGTAATAGATCTCTGCACCTACCTTGTTTTGGTACATTCACAGTGAATGGTGTT GGTGGAACACTACCATCACAAGAAAACACCACGGCAGTCACGCTCCGGGTTGAGGCAAATTGTA AGGGCAAGGAAAGATACATGAACGGGTCAAAAGTCACTGAAACCTTCCCACAGACTGGGCAAAC CAAAGTGGACTTGTACTGCCCCTGGAAAAACATAATAAAAGGAAATGTCAGTAAAACATTTGTC TTAGAATAATTAGGAAAAGAGAACTAAATCATAAGACAAAATATGTCAAATTGCATGCAACATG CAGATTTATGTGTCCTGTGACAAGTATGCACCTCCAATGTATCGTAGTATGTGTAGGGAAGATA CACAAGAGTTTATACACATCGTAAGAAACACCCTACACTGGAAAGTACATATATACAGATAAAA TATACTCCCTCCGTCCCATATTTAGATGTCATTTTAGAAACTCTCACGGAAACCAACGCTGGAG CCAAAAGACCAAAATGCCCGTCAAGGAGCAGAAATATAAATGTATATTGGGGAAAGAGAAAGGT GCATTGGAAAGTGAGAAGGTCAAGTACTTTGGAACAAAATTGAATGTTATAAGGCCATCTATTT TGGGAGGGAGGGAGGGAGTACGTCTAACAAAGCTAATCCTTCAGCATAAAAATAACATATATTC AGCTCCATGTGTAATGAGGTAGGAAAGGGGGAGAAGGGGGGAACCTTGAGATGAGGAGCTCATC TCGTCGCTAGTGTTTTGGAGACGTCGCCAGTGTTCTGGAGCTGCTGCTGGTGTTCTAGAGCCGC AGCCTGTGTTCTGGACTCAGCAGAGGAGAGGAAAAGTTTCAAGGGGTGACAAGGGGTGGTGGCG CATTGCCTTTATACTACTGTAGATGGGCCGAAAAAATAGAAGCCCAGTAGCCCACTAGAAAACC CTAGCCGCCTGGACAAATCCTGATCGATTTACCATCTAGTCGGACACTAATCGCCCCTAATCGA CGACTAGTCGGACGACCTGGACGTGATACTCTAGTCGAGTCGTCCGGCTGATCGGCCACTACCA GGCGACCTGCCCGACTAATCGTGATTAGTCGGACGACTTGAAAACAGTGCACATCTGCACATCT AATCACAACAGGAAGATCATAGAAGGGTCTTTACATTACATACAGTAAATGCCTGAAACTGCTA GCGGTGCTTACAATACCAAGCAAGAGAAACATGATGGTCCCAAATTGCAATGGCTATTAGCATT TATCTAAAGCCAAAGCATCACAACAGTAAGACAAGTGATTCACAGGTTTAGAACTAACCTGGCA TACATCAACAATGATTGAATTATTTCTGGCAATATGATTTGCCCAATATTCATCTGCAACTTCT TCATCTGATCTTCCATCAGCATCCCCTGAATTTATGTAAGGTCTATGCTTCACACGATTCAAAT CTTCATGGAGTCCATCCAATAGGAACGCCAACAGCTCCTGCAGTATTTTATCAAAGTACAGATT CAGATCAGAAAAGAAAAAAGACTCAGTTGAGTGAAATGCAACATGGATCCTTAAACTTTCCCCA CATTCTCATCTTGGCCAATGAACTCTCAAAGTGAATAAGTGATAATCTGGGTCCTTTAACTTTT CAAGTGGTTCATTCAATGTGTGAATTTAGGTTCATGATTGGGCATAGGCTATCAACCACACAAA AAATTGAAGGGCACACAATTTTGAGAGTCCATGGACCCTAATGAGAATGTGGAAAAAGTTTAGG GACCTGCAGTGCATTTCACTCAAAAAAATACAACATAAGATATATCACTCTAAATAGACGATCA AACCTGTGAATCATGCTGGTTGTATCCACTGAACTGAGATGCAAACCGAGAAAGCTTCATTTTG AATGGTCTAGGTGAAACAGGGGCACGTCCTCCAGGAGCCCAGAGTTTTCTCAATAGCTCACCAA AAGCTAATGCAAGTTCACC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.083419189

Conservation Information
Conserved circRNAs	NA
PMCS	0.083419189

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							126977958-126973803(-)
						
					

						Potential amino acid sequence
						
							MKLSRFASQFSGYNQHDSQELLAFLLDGLHEDLNRVKHRPYINSGDADGRSDEEVADEYWANHI
ARNNSIIVDVCQGQYKSTLVCPVCGKVSVTFDPFMYLSLPLQFASTRSVTAVVFSCDGSVPPTP
FTVNVPKQGRCRDLLQALGAACSLKNGEKLLIAEIRNHKIYRFIDDPVLQLSTISDDDHLAVYK
LPKLEKRVNYIQFVHRHEDLDHGNNNSLTSWKPYGVPLLAQISRNEIVTGFDIHELVHKMLVPV
LRNPDSLHLAVQSSVSTRTHSYHTDSSKCQLLLVDDSNTVIEKSNDAIRIPQSSLATVFFINWP
KADLKKIDTHHLEYLPEVFMYAPPAKRTRGEALSLYACLDAFLREEPLVPEDMWYCPRCKEQRQ
ASKKLDLWRLPEVLVIHLKRFSFSRSTKQKLETFVNFPIHDLDLTNYIANKKTSERQIYELYAV
SNHYGNMASGHYTAHIKGELALAFGELLRKLWAPGGRAPVSPRPFKMKLSRFASQFSGYNQHDS
QELLAFLLDGLHEDLNRVKHRPYINSGDADGRSDEEVADEYWANHIARNNSIIVDVCQGQYKST
LVCPVCGKVSVTFDPFMYLSLPLQFASTRSVTAVVFSCDGSVPPTPFTVNVPKQGRCRDLLQAL
GAACSLKNGEKLLIAEIRNHKIYRFIDDPVLQLSTISDDDHLAVYKLPKLEKRVNYIQFVHRHE
DLDHGNNNSLTSWKPYGVPLLAQISRNEIVTGFDIHELVHKMLVPVLRNPDSLHLAVQSSVSTR
THSYHTDSSKCQLLLVDDSNTVIEKSNDAIRIPQSSLATVFFINWPKADLKKIDTHHLEYLPEV
FMYAPPAKRTRGEALSLYACLDAFLREEPLVPEDMWYCPRCKEQRQASKKLDLWRLPEVLVIHL
KRFSFSRSTKQKLETFVNFPIHDLDLTNYIANKKTSERQIYELYAVSNHYGNMASGHYTAHIKG
ELALAFGELLRKLWAPGGRAPVSPRPFKMKLSRFASQFSGYNQHDSQELLAFLLDGLHEDLNRV
KHRPYINSGDADGRSDEEVADEYWANHIARNNSIIVDVCQGQYKSTLVCPVCGKVSVTFDPFMY
LSLPLQFASTRSVTAVVFSCDGSVPPTPFTVNVPKQGRCRDLLQALGAACSLKNGEKLLIAEIR
NHKIYRFIDDPVLQLSTISDDDHLAVYKLPKLEKRVNYIQFVHRHEDLDHGNNNSLTSWKPYGV
PLLAQISRNEIVTGFDIHELVHKMLVPVLRNPDSLHLAVQSSVSTRTHSYHTDSSKCQLLLVDD
SNTVIEKSNDAIRIPQSSLATVFFINWPKADLKKIDTHHLEYLPEVFMYAPPAKRTRGEALSLY
ACLDAFLREEPLVPEDMWYCPRCKEQRQASKKLDLWRLPEVLVIHLKRFSFSRSTKQKLETFVN
FPIHDLDLTNYIANKKTSERQIYELYAVSNHYGNMASGHYTAHIKGELALAFGELLRKLWAPGG
RAPVSPRPFKMKLSRFASQFSGYNQHDSQELLAFLLDGLHEDLNRVKHRPYINSGDADGRSDEE
VADEYWANHIARNNSIIVDVCQGQYKSTLVCPVCGKVSVTFDPFMYLSLPLQFASTRSVTAVVF
SCDGSVPPTPFTVNVPKQGRCRDLLQALGAACSLKNGEKLLIAEIRNHKIYRFIDDPVLQLSTI
SDDDHLAVYKLPKLEKRVNYIQFVHRHEDLDHGNNNSLTSWKPYGVPLLAQISRNEIVTGFDIH
ELVHKMLVPVLRNPDSLHLAVQSSVSTRTHSYHTDSSKCQLLLVDDSNTVIEKSNDAIRIPQSS
LATVFFINWPKADLKKIDTHHLEYLPEVFMYAPPAKRTRGEALSLYACLDAFLREEPLVPEDMW
YCPRCKEQRQASKKLDLWRLPEVLVIHLKRFSFSRSTKQKLETFVNFPIHDLDLTNYIANKKTS
ERQIYELYAVSNHYGNMASGHYTAHIK(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	126977958-126973803(-)
Potential amino acid sequence	MKLSRFASQFSGYNQHDSQELLAFLLDGLHEDLNRVKHRPYINSGDADGRSDEEVADEYWANHI ARNNSIIVDVCQGQYKSTLVCPVCGKVSVTFDPFMYLSLPLQFASTRSVTAVVFSCDGSVPPTP FTVNVPKQGRCRDLLQALGAACSLKNGEKLLIAEIRNHKIYRFIDDPVLQLSTISDDDHLAVYK LPKLEKRVNYIQFVHRHEDLDHGNNNSLTSWKPYGVPLLAQISRNEIVTGFDIHELVHKMLVPV LRNPDSLHLAVQSSVSTRTHSYHTDSSKCQLLLVDDSNTVIEKSNDAIRIPQSSLATVFFINWP KADLKKIDTHHLEYLPEVFMYAPPAKRTRGEALSLYACLDAFLREEPLVPEDMWYCPRCKEQRQ ASKKLDLWRLPEVLVIHLKRFSFSRSTKQKLETFVNFPIHDLDLTNYIANKKTSERQIYELYAV SNHYGNMASGHYTAHIKGELALAFGELLRKLWAPGGRAPVSPRPFKMKLSRFASQFSGYNQHDS QELLAFLLDGLHEDLNRVKHRPYINSGDADGRSDEEVADEYWANHIARNNSIIVDVCQGQYKST LVCPVCGKVSVTFDPFMYLSLPLQFASTRSVTAVVFSCDGSVPPTPFTVNVPKQGRCRDLLQAL GAACSLKNGEKLLIAEIRNHKIYRFIDDPVLQLSTISDDDHLAVYKLPKLEKRVNYIQFVHRHE DLDHGNNNSLTSWKPYGVPLLAQISRNEIVTGFDIHELVHKMLVPVLRNPDSLHLAVQSSVSTR THSYHTDSSKCQLLLVDDSNTVIEKSNDAIRIPQSSLATVFFINWPKADLKKIDTHHLEYLPEV FMYAPPAKRTRGEALSLYACLDAFLREEPLVPEDMWYCPRCKEQRQASKKLDLWRLPEVLVIHL KRFSFSRSTKQKLETFVNFPIHDLDLTNYIANKKTSERQIYELYAVSNHYGNMASGHYTAHIKG ELALAFGELLRKLWAPGGRAPVSPRPFKMKLSRFASQFSGYNQHDSQELLAFLLDGLHEDLNRV KHRPYINSGDADGRSDEEVADEYWANHIARNNSIIVDVCQGQYKSTLVCPVCGKVSVTFDPFMY LSLPLQFASTRSVTAVVFSCDGSVPPTPFTVNVPKQGRCRDLLQALGAACSLKNGEKLLIAEIR NHKIYRFIDDPVLQLSTISDDDHLAVYKLPKLEKRVNYIQFVHRHEDLDHGNNNSLTSWKPYGV PLLAQISRNEIVTGFDIHELVHKMLVPVLRNPDSLHLAVQSSVSTRTHSYHTDSSKCQLLLVDD SNTVIEKSNDAIRIPQSSLATVFFINWPKADLKKIDTHHLEYLPEVFMYAPPAKRTRGEALSLY ACLDAFLREEPLVPEDMWYCPRCKEQRQASKKLDLWRLPEVLVIHLKRFSFSRSTKQKLETFVN FPIHDLDLTNYIANKKTSERQIYELYAVSNHYGNMASGHYTAHIKGELALAFGELLRKLWAPGG RAPVSPRPFKMKLSRFASQFSGYNQHDSQELLAFLLDGLHEDLNRVKHRPYINSGDADGRSDEE VADEYWANHIARNNSIIVDVCQGQYKSTLVCPVCGKVSVTFDPFMYLSLPLQFASTRSVTAVVF SCDGSVPPTPFTVNVPKQGRCRDLLQALGAACSLKNGEKLLIAEIRNHKIYRFIDDPVLQLSTI SDDDHLAVYKLPKLEKRVNYIQFVHRHEDLDHGNNNSLTSWKPYGVPLLAQISRNEIVTGFDIH ELVHKMLVPVLRNPDSLHLAVQSSVSTRTHSYHTDSSKCQLLLVDDSNTVIEKSNDAIRIPQSS LATVFFINWPKADLKKIDTHHLEYLPEVFMYAPPAKRTRGEALSLYACLDAFLREEPLVPEDMW YCPRCKEQRQASKKLDLWRLPEVLVIHLKRFSFSRSTKQKLETFVNFPIHDLDLTNYIANKKTS ERQIYELYAVSNHYGNMASGHYTAHIK(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d004659_circ_g.2

Address

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