Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os06g0199100_circ_g.1 |
ID in PlantcircBase | osa_circ_030086 |
Alias | Os06circ05021 |
Organism | Oryza sativa |
Position | chr6: 5033973-5034305 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | SMALT, Segemehl |
Parent gene | Os06g0199100 |
Parent gene annotation |
Helix-turn-helix, AraC type, subdomain 2 domain containing prote in. (Os06t0199100-01) |
Parent gene strand | - |
Alternative splicing | Os06g0199100_circ_g.2 |
Support reads | 2 |
Tissues | leaf |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | Os06t0199100-01:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.320118193 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Lu et al., 2015 |