Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d015446_circ_g.1 |
ID in PlantcircBase | zma_circ_002012 |
Alias | circ2128 |
Organism | Zea mays |
Position | chr5: 90511609-90512813 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d015446 |
Parent gene annotation |
Calcium-transporting ATPase 9 plasma membrane-type |
Parent gene strand | - |
Alternative splicing | Zm00001d015446_circ_g.2 Zm00001d015446_circ_g.3 |
Support reads | 5 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-AA |
Number of exons covered | Zm00001d015446_T022:4 Zm00001d015446_T004:4 Zm00001d015446_T018:4 Zm00001d015446_T006:4 Zm00001d015446_T009:4 Zm00001d015446_T020:4 Zm00001d015446_T026:4 Zm00001d015446_T002:4 Zm00001d015446_T005:4 Zm00001d015446_T016:4 Zm00001d015446_T008:4 Zm00001d015446_T013:4 Zm00001d015446_T015:3 Zm00001d015446_T028:4 Zm00001d015446_T001:4 Zm00001d015446_T027:4 Zm00001d015446_T017:4 Zm00001d015446_T024:4 Zm00001d015446_T030:4 Zm00001d015446_T010:4 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.043925754 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |