Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d025673_circ_g.2 |
ID in PlantcircBase | zma_circ_003225 |
Alias | circ360 |
Organism | Zea mays |
Position | chr10: 125898369-125899340 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d025673 |
Parent gene annotation |
RNA binding (RRM/RBD/RNP motifs) family protein |
Parent gene strand | + |
Alternative splicing | Zm00001d025673_circ_g.1 |
Support reads | 2 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d025673_T001:3 Zm00001d025673_T008:3 Zm00001d025673_T013:4 Zm00001d025673_T004:4 Zm00001d025673_T016:4 Zm00001d025673_T017:4 Zm00001d025673_T005:4 Zm00001d025673_T015:4 Zm00001d025673_T010:4 Zm00001d025673_T011:4 Zm00001d025673_T002:3 Zm00001d025673_T009:5 Zm00001d025673_T003:5 Zm00001d025673_T012:4 Zm00001d025673_T018:2 Zm00001d025673_T006:3 Zm00001d025673_T007:4 Zm00001d025673_T014:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.028549383 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |