Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os06g0681400_circ_g.49 |
ID in PlantcircBase | osa_circ_032071 |
Alias | NA |
Organism | Oryza sativa |
Position | chr6: 28403825-28404016 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | circseq_cup |
Parent gene | Os06g0681400 |
Parent gene annotation |
Ubiquitin domain containing protein. (Os06t0681400-01) |
Parent gene strand | + |
Alternative splicing | Os06g0681400_circ_g.47 Os06g0681400_circ_g.48 Os06g0681400_circ_g.50 |
Support reads | 2 |
Tissues | root |
Exon boundary | No-No |
Splicing signals | CT-GG |
Number of exons covered | Os06t0681400-01:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 1.211029954 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2016 |