Plant Circular RNA Database

Detail information of orai.002G162800_circ_g.3

			
						 General Information
					
						CircRNA Name
						orai.002G162800_circ_g.3
					
						ID in PlantcircBase
						gra_circ_000177
					
						Alias
						Chr02:38593231|38596849
					
						Organism
						
							Gossypium raimondii						
					
						Position
						
							chrChr02: 38593231-38596849  JBrowse»						
					
						Reference genome
						
							Graimondii_221						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Gorai.002G162800						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						-
					
						Alternative splicing
						
							orai.002G162800_circ_g.1 orai.002G162800_circ_g.2 						
					
						Support reads
						3
					
						Tissues
						leaf
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Gorai.002G162800.9:6
Gorai.002G162800.8:6
Gorai.002G162800.6:6
Gorai.002G162800.3:6
Gorai.002G162800.2:6
Gorai.002G162800.1:6
Gorai.002G162800.4:6
Gorai.002G162800.5:6
Gorai.002G162800.7:6

General Information
CircRNA Name	orai.002G162800_circ_g.3
ID in PlantcircBase	gra_circ_000177
Alias	Chr02:38593231\|38596849
Organism	Gossypium raimondii
Position	chrChr02: 38593231-38596849 JBrowse»
Reference genome	Graimondii_221
Type	e-circRNA
Identification method	CIRI
Parent gene	Gorai.002G162800
Parent gene annotation	NA
Parent gene strand	-
Alternative splicing	orai.002G162800_circ_g.1 orai.002G162800_circ_g.2
Support reads	3
Tissues	leaf
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Gorai.002G162800.9:6 Gorai.002G162800.8:6 Gorai.002G162800.6:6 Gorai.002G162800.3:6 Gorai.002G162800.2:6 Gorai.002G162800.1:6 Gorai.002G162800.4:6 Gorai.002G162800.5:6 Gorai.002G162800.7:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GTCCCACCACACCATGCAACCTTAGCGTGACCCTTGATTACATTACCTTCCACCAGTTCTCCAT
GTACTTCAAGGTTTACAACCTTTGGAACTCCATTCCcttagcaactttggacgtgctcattgct
tcaagctcattctcaccattgagcgttgacgaatttgtcttaaaccactgtactctgcttgaac
cttccgta

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 767
Transcript exons: 38593231-38593415,38595226-38595273,38595361-38595461,38
595823-38595958,38596436-38596611,38596729-38596849
CTTAGCAACTTTGGACGTGCTCATTGCTTCAAGCTCATTCTCACCATTGAGCGTTGACGAATTT
GTCTTAAACCACTGTACTCTGCTTGAACCTTCCGTACCTCCCATGACAGCACCGGTCACAGTAA
TCTTACTGTTCTCCCTCAAATCGCCAATTATCTTAACATTTGTTACTTTTGGTGGAGCTTGCCT
CACAGTACCAGAGACTATTGACACAGATTCCCCTTCCTGTCCCTCAAAGTTTATAGGTATATAT
ACAAAAGCCAAGCGTCGCCCAACATCTTCTTTCGTCAAACTATACTCAGGTGTACCACTTGTCA
CTATCAGAAAGTCTCCAGTCTCCTTATTCTCGCGTAACCACTCAAACTTGCTCGGACCCTCTCT
TCCTCCAAAGTAATTGCCAACTCCCCTGATGACATTCCCTTCTACAGCATCCCCAACAATTCGG
ACATTATTAACGGATGGAGCAGCTGCTTTTACAAAATCAGTATACTTATATTGAGGCTCCCCTT
TGGCACCTTCTTCTGTTACTGGAGTATACATAAAGACCAAACTGGAGTCAATGTCATCTAAGGT
CAATTGATACTCTTCATCCTCTGCTCCAGCAATTACCACCGGGCTGCTGTTCCATCTTTTCCTT
AACCAGCTAGCAACACCCTTCCCAGGAGTCCCACCACACCATGCAACCTTAGCGTGACCCTTGA
TTACATTACCTTCCACCAGTTCTCCATGTACTTCAAGGTTTACAACCTTTGGAACTCCATTCC
						
					

						Genomic sequence
						
							CTTAGCAACTTTGGACGTGCTCATTGCTTCAAGCTCATTCTCACCATTGAGCGTTGACGAATTT
GTCTTAAACCACTGTACTCTGCTTGAACCTTCCGTACCTCCCATGACAGCACCGGTCACAGTAA
TCTTACTGTTCTCCCTCAAATCGCCAATTATCTTAACATTTGTTACTTTTGGTGGAGCTGGAAA
TTTAAAAAATAATATCTCAAAACAAAGGAAATTAGTAACACAAGAAAGCAGTCACACTAAGAAT
TAATTCTCATCTATAAGGATGATAAACGTTAAGGACTAAACTCTTGATATCATAGATGATATTT
CTTGCTCCAAGGATTATATTCATAAAATGAAAAGCATAAGTTATAAGCAAACTGGGAACATAAA
GAATAGTTTGCAATCAATATAAGAAGATAATAATACCTCACCATACAAATTAAAATGGCAAGGG
GGTCTAAAGAATCCTTAGTAAAAAAAAAAATCAATTGAGCCCTCAATCACAAAAATAAAAAATC
AATTAGGGCATTCCATTAACAGAAACTGCCGTAGACTGATTTCACTGTTAACAGACACTGATGT
GGCTGACGAAAGTAATAAAAACTGACATGTGGCATGCCTTGAGGATACTTACGTGGCACGTCAA
CATGTTTCTAAAAAACCCTAAATAGTAACTAAATAATGCATGTCTAGAATAAACCCTGAAAACT
TAACATCCACGTCATCTAAGTATGGACATCCATTTGCCTAGATTCATTCTGAAGATGGTTTAGA
ATATTATAAAAATTATTAAAAATTGTAAATAATTATAAAATTATTTAAAAAGGTAAAAATATTA
AAAATTAAAAATTATTAAAAAATTGTCAAAATAGTCAATTACACATAATATGATCAAAATATCA
CACATTATGATGACTAAAATAAAATTTGATACAAATATATACATATACATGTACATATACATAT
ATATTACACACACACATGTATATGTATATTAAAATTAGTGTTAATATTTTGTACCACCATTTTT
CTTAAAAATACCTCTTATTTTTAACATGCATATATATGTTAAAATTAGTGTAGATATTGTGGTT
TCTATTATACATACATATGTGTGTGTAATATATACATATATTTGTGCCAAATTTCATTTTAGTC
CACAATATCATGTGATATTTTGGTCCTACTATATTTCATCGACTATTTTCATCTTTTTACAATT
TTTTAATAATTTTATAATTTTTAAATATTTTTAGAACTCTTATTTTTTTATGATTTTTATAAAT
TTTAATTTTTTTAGAATTATTATAATTTTTTACCATTTTTAATATTTAATGTTTTATTATTTTT
TTACCATTTATATATATAATGTTCTGAACCACATCCAGAATTTGTTGTCCAAATTAAAATGAAC
TCGCACACCAATTTGTCCAAGTTCATTCTGAACATGCATTTTTAATAATTCTTTTATATATCTT
TTTTATGATTTTTTTTTATTTTTTTAAATATATGCTAACGTAGCATGTCAAGTCAGCATACTTA
TCGACATGACATACCATGTAAGCTTCTCATTGCTTCCATTAGTCAGTCAGAATTCGTTAATGGT
CAAACTGATCAAAAACAGTTTCCACTAACAGGACTTAATTGATGTTTTATCACTCAAAGCTCAA
TTGACTGCACTTTGGGGTAACATTCAACAAGTCTGATGATGCCATGGACTAGTGAACATTCTTA
AAATATTGGAAACGAGTAAGCAGTACAATTGTCTACTATAGTAATGATGATAGAGAAGTCAACC
ACAGGCTGCAGTGGGCTCTTTTTTTTTCACAGATTCTGCAGAATAAATAGGATAAGCATTCTCT
AAAAGCAAACTAAGAGTTACCCCATAAAATAAAATTAAATCAATTACCAAACTTTTCTAGTCAT
GTATCTACTACCAGTTTAACAACAAACAATGATAAAATATACATTACCGTGAAACATAAACATA
AATGAGTATACCTTGCCTCACAGTACCAGAGACTATTGACACAGATTCCCCTTCCTGTCCTGAA
AACAGTGAATATTACCACATTACCATCCAATTTACAAGTTGCTTGATGGTAAGAAAGTTCAAAA
AGGGCAAATTGGATATACCCTCAAAGTTTATAGGTATATATACAAAAGCCAAGCGTCGCCCAAC
ATCTTCTTTCGTCAAACTATACTCAGGTGTACCACTTGTCACTATCAGAAAGTCTCTGTCAACA
AATTCCAGTAAAAGGATTTGTGAAGAACTAACGTAAGGTAATGTGATGTAATGTAAGAAAACTG
TATGAAAACGATAGTGGGATTAAATCTCTAGATAAATTTCATGAAAATAATCCAATCATCATAA
TAGGTGAGTGATTAAGACAATATCTCCATATGGAAGAAAGTACACTCATGCATAAGTGTAAGAG
AGCCCAAGCGAACAAAAATGTTGTAAGAAGGAAAAAATAAAAAATAATTGTAAAAAATTGCAAA
AGGAATTAGGTTAACTTCAAATTTAGCAAAAACACAAGAGGAGAGGGGATTAGATCCACTTATG
CTCCAAAGTACTCATTTTAAAAGTGTACTAACCCAGTCTCCTTATTCTCGCGTAACCACTCAAA
CTTGCTCGGACCCTCTCTTCCTCCAAAGTAATTGCCAACTCCCCTGATGACATTCCCTTCTACA
GCATCCCCAACAATTCGGACATTATTAACGGATGGAGCAGCTGCAAACATATTTCAATTATTTT
AAATTGGAATTAAAAAAGAGAGAAAGCACAAGAGAAGATGAATGACAGGGAACAAGCTCCCCAT
AACATCTAATTAAGTACTCAACTTAGAATCTCTTTATTGAACTAGAAAAATGAAAAGAAGAGAT
AAGCAGATTCAACAGGAAATGCAAAACTAGTTCTACTCAACGCTGCCAAGACTTCAAGGAGACA
TCTGTATCTTTTGATGAATGTTATAACAAAGTATAATTAGCAGCTTACATGATACAATGATATG
AACAGTTAATAGAAATGCAAACAACTGCTATAGAAATCATATAGAACTGCTATGGAAATAAGTG
ATCTGCCAGAGAAAAAACAAAAGCATAAATTTTAAAAATGAGATACCACCAAAATTGAGTAACA
TATTTAAGAAACAAAATTAAATTATACCAAAGCTAGAAGATGAGATATGCATAGACTTTTCCCA
CATACCTGCTTTTACAAAATCAGTATACTTATATTGAGGCTCCCCTTTGGCACCTTCTTCTGTT
ACTGGAGTATACATAAAGACCAAACTGGAGTCAATGTCATCTAAGGTCAATTGATACTCTTCAT
CCTCTGCTCCAGCAATTACCACCGGGCTGCTGTTCCATCTTTTCCTTAACCAGCTGAAAATGTG
GAAAACAAAAAATTTATCCGTAAGGGTTTCATTTAAAAGAAACATGTAAGCATGTACATATATC
AGTATGGGTATGTCGTAAAACCACTTTAAGAAGCATCCTTACCTAGCAACACCCTTCCCAGGAG
TCCCACCACACCATGCAACCTTAGCGTGACCCTTGATTACATTACCTTCCACCAGTTCTCCATG
TACTTCAAGGTTTACAACCTTTGGAACTCCATTCC
						
					

			
		

Sequences
Splice junction sequence	GTCCCACCACACCATGCAACCTTAGCGTGACCCTTGATTACATTACCTTCCACCAGTTCTCCAT GTACTTCAAGGTTTACAACCTTTGGAACTCCATTCCcttagcaactttggacgtgctcattgct tcaagctcattctcaccattgagcgttgacgaatttgtcttaaaccactgtactctgcttgaac cttccgta
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 767 Transcript exons: 38593231-38593415,38595226-38595273,38595361-38595461,38 595823-38595958,38596436-38596611,38596729-38596849 CTTAGCAACTTTGGACGTGCTCATTGCTTCAAGCTCATTCTCACCATTGAGCGTTGACGAATTT GTCTTAAACCACTGTACTCTGCTTGAACCTTCCGTACCTCCCATGACAGCACCGGTCACAGTAA TCTTACTGTTCTCCCTCAAATCGCCAATTATCTTAACATTTGTTACTTTTGGTGGAGCTTGCCT CACAGTACCAGAGACTATTGACACAGATTCCCCTTCCTGTCCCTCAAAGTTTATAGGTATATAT ACAAAAGCCAAGCGTCGCCCAACATCTTCTTTCGTCAAACTATACTCAGGTGTACCACTTGTCA CTATCAGAAAGTCTCCAGTCTCCTTATTCTCGCGTAACCACTCAAACTTGCTCGGACCCTCTCT TCCTCCAAAGTAATTGCCAACTCCCCTGATGACATTCCCTTCTACAGCATCCCCAACAATTCGG ACATTATTAACGGATGGAGCAGCTGCTTTTACAAAATCAGTATACTTATATTGAGGCTCCCCTT TGGCACCTTCTTCTGTTACTGGAGTATACATAAAGACCAAACTGGAGTCAATGTCATCTAAGGT CAATTGATACTCTTCATCCTCTGCTCCAGCAATTACCACCGGGCTGCTGTTCCATCTTTTCCTT AACCAGCTAGCAACACCCTTCCCAGGAGTCCCACCACACCATGCAACCTTAGCGTGACCCTTGA TTACATTACCTTCCACCAGTTCTCCATGTACTTCAAGGTTTACAACCTTTGGAACTCCATTCC
Genomic sequence	CTTAGCAACTTTGGACGTGCTCATTGCTTCAAGCTCATTCTCACCATTGAGCGTTGACGAATTT GTCTTAAACCACTGTACTCTGCTTGAACCTTCCGTACCTCCCATGACAGCACCGGTCACAGTAA TCTTACTGTTCTCCCTCAAATCGCCAATTATCTTAACATTTGTTACTTTTGGTGGAGCTGGAAA TTTAAAAAATAATATCTCAAAACAAAGGAAATTAGTAACACAAGAAAGCAGTCACACTAAGAAT TAATTCTCATCTATAAGGATGATAAACGTTAAGGACTAAACTCTTGATATCATAGATGATATTT CTTGCTCCAAGGATTATATTCATAAAATGAAAAGCATAAGTTATAAGCAAACTGGGAACATAAA GAATAGTTTGCAATCAATATAAGAAGATAATAATACCTCACCATACAAATTAAAATGGCAAGGG GGTCTAAAGAATCCTTAGTAAAAAAAAAAATCAATTGAGCCCTCAATCACAAAAATAAAAAATC AATTAGGGCATTCCATTAACAGAAACTGCCGTAGACTGATTTCACTGTTAACAGACACTGATGT GGCTGACGAAAGTAATAAAAACTGACATGTGGCATGCCTTGAGGATACTTACGTGGCACGTCAA CATGTTTCTAAAAAACCCTAAATAGTAACTAAATAATGCATGTCTAGAATAAACCCTGAAAACT TAACATCCACGTCATCTAAGTATGGACATCCATTTGCCTAGATTCATTCTGAAGATGGTTTAGA ATATTATAAAAATTATTAAAAATTGTAAATAATTATAAAATTATTTAAAAAGGTAAAAATATTA AAAATTAAAAATTATTAAAAAATTGTCAAAATAGTCAATTACACATAATATGATCAAAATATCA CACATTATGATGACTAAAATAAAATTTGATACAAATATATACATATACATGTACATATACATAT ATATTACACACACACATGTATATGTATATTAAAATTAGTGTTAATATTTTGTACCACCATTTTT CTTAAAAATACCTCTTATTTTTAACATGCATATATATGTTAAAATTAGTGTAGATATTGTGGTT TCTATTATACATACATATGTGTGTGTAATATATACATATATTTGTGCCAAATTTCATTTTAGTC CACAATATCATGTGATATTTTGGTCCTACTATATTTCATCGACTATTTTCATCTTTTTACAATT TTTTAATAATTTTATAATTTTTAAATATTTTTAGAACTCTTATTTTTTTATGATTTTTATAAAT TTTAATTTTTTTAGAATTATTATAATTTTTTACCATTTTTAATATTTAATGTTTTATTATTTTT TTACCATTTATATATATAATGTTCTGAACCACATCCAGAATTTGTTGTCCAAATTAAAATGAAC TCGCACACCAATTTGTCCAAGTTCATTCTGAACATGCATTTTTAATAATTCTTTTATATATCTT TTTTATGATTTTTTTTTATTTTTTTAAATATATGCTAACGTAGCATGTCAAGTCAGCATACTTA TCGACATGACATACCATGTAAGCTTCTCATTGCTTCCATTAGTCAGTCAGAATTCGTTAATGGT CAAACTGATCAAAAACAGTTTCCACTAACAGGACTTAATTGATGTTTTATCACTCAAAGCTCAA TTGACTGCACTTTGGGGTAACATTCAACAAGTCTGATGATGCCATGGACTAGTGAACATTCTTA AAATATTGGAAACGAGTAAGCAGTACAATTGTCTACTATAGTAATGATGATAGAGAAGTCAACC ACAGGCTGCAGTGGGCTCTTTTTTTTTCACAGATTCTGCAGAATAAATAGGATAAGCATTCTCT AAAAGCAAACTAAGAGTTACCCCATAAAATAAAATTAAATCAATTACCAAACTTTTCTAGTCAT GTATCTACTACCAGTTTAACAACAAACAATGATAAAATATACATTACCGTGAAACATAAACATA AATGAGTATACCTTGCCTCACAGTACCAGAGACTATTGACACAGATTCCCCTTCCTGTCCTGAA AACAGTGAATATTACCACATTACCATCCAATTTACAAGTTGCTTGATGGTAAGAAAGTTCAAAA AGGGCAAATTGGATATACCCTCAAAGTTTATAGGTATATATACAAAAGCCAAGCGTCGCCCAAC ATCTTCTTTCGTCAAACTATACTCAGGTGTACCACTTGTCACTATCAGAAAGTCTCTGTCAACA AATTCCAGTAAAAGGATTTGTGAAGAACTAACGTAAGGTAATGTGATGTAATGTAAGAAAACTG TATGAAAACGATAGTGGGATTAAATCTCTAGATAAATTTCATGAAAATAATCCAATCATCATAA TAGGTGAGTGATTAAGACAATATCTCCATATGGAAGAAAGTACACTCATGCATAAGTGTAAGAG AGCCCAAGCGAACAAAAATGTTGTAAGAAGGAAAAAATAAAAAATAATTGTAAAAAATTGCAAA AGGAATTAGGTTAACTTCAAATTTAGCAAAAACACAAGAGGAGAGGGGATTAGATCCACTTATG CTCCAAAGTACTCATTTTAAAAGTGTACTAACCCAGTCTCCTTATTCTCGCGTAACCACTCAAA CTTGCTCGGACCCTCTCTTCCTCCAAAGTAATTGCCAACTCCCCTGATGACATTCCCTTCTACA GCATCCCCAACAATTCGGACATTATTAACGGATGGAGCAGCTGCAAACATATTTCAATTATTTT AAATTGGAATTAAAAAAGAGAGAAAGCACAAGAGAAGATGAATGACAGGGAACAAGCTCCCCAT AACATCTAATTAAGTACTCAACTTAGAATCTCTTTATTGAACTAGAAAAATGAAAAGAAGAGAT AAGCAGATTCAACAGGAAATGCAAAACTAGTTCTACTCAACGCTGCCAAGACTTCAAGGAGACA TCTGTATCTTTTGATGAATGTTATAACAAAGTATAATTAGCAGCTTACATGATACAATGATATG AACAGTTAATAGAAATGCAAACAACTGCTATAGAAATCATATAGAACTGCTATGGAAATAAGTG ATCTGCCAGAGAAAAAACAAAAGCATAAATTTTAAAAATGAGATACCACCAAAATTGAGTAACA TATTTAAGAAACAAAATTAAATTATACCAAAGCTAGAAGATGAGATATGCATAGACTTTTCCCA CATACCTGCTTTTACAAAATCAGTATACTTATATTGAGGCTCCCCTTTGGCACCTTCTTCTGTT ACTGGAGTATACATAAAGACCAAACTGGAGTCAATGTCATCTAAGGTCAATTGATACTCTTCAT CCTCTGCTCCAGCAATTACCACCGGGCTGCTGTTCCATCTTTTCCTTAACCAGCTGAAAATGTG GAAAACAAAAAATTTATCCGTAAGGGTTTCATTTAAAAGAAACATGTAAGCATGTACATATATC AGTATGGGTATGTCGTAAAACCACTTTAAGAAGCATCCTTACCTAGCAACACCCTTCCCAGGAG TCCCACCACACCATGCAACCTTAGCGTGACCCTTGATTACATTACCTTCCACCAGTTCTCCATG TACTTCAAGGTTTACAACCTTTGGAACTCCATTCC

			
						 Conservation Information
					
						Conserved circRNAs
						
							ghi_circ_000805* gar_circ_000782* 						
					
						PMCS
						0.433577747

Conservation Information
Conserved circRNAs	ghi_circ_000805* gar_circ_000782*
PMCS	0.433577747

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							38596509-38596828(-)
38596812-38595882(+)
						
						Potential amino acid sequence
						
							MYTPVTEEGAKGEPQYKYTDFVKAAAPSVNNVRIVGDAVEGNVIRGVGNYFGGREGPSKFEWLR
ENKETGDFLIVTSGTPEYSLTKEDVGRRLAFVYIPINFEGQEGESVSIVSGTVRQAPPKVTNVK
IIGDLRENSKITVTGAVMGGTEGSSRVQWFKTNSSTLNGENELEAMSTSKVAKGMEFQRL*(-)
MYFKVYNLWNSIPLATLDVLIASSSFSPLSVDEFVLNHCTLLEPSVPPMTAPVTVILLFSLKSP
IILTFVTFGGACLTVPETIDTDSPSCPSKFIGIYTKAKRRPTSSFVKLYSGVPLVTIRKSPVSL
FSRNHSNLLGPSLPPK*(+)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	38596509-38596828(-) 38596812-38595882(+)
Potential amino acid sequence	MYTPVTEEGAKGEPQYKYTDFVKAAAPSVNNVRIVGDAVEGNVIRGVGNYFGGREGPSKFEWLR ENKETGDFLIVTSGTPEYSLTKEDVGRRLAFVYIPINFEGQEGESVSIVSGTVRQAPPKVTNVK IIGDLRENSKITVTGAVMGGTEGSSRVQWFKTNSSTLNGENELEAMSTSKVAKGMEFQRL(-) MYFKVYNLWNSIPLATLDVLIASSSFSPLSVDEFVLNHCTLLEPSVPPMTAPVTVILLFSLKSP IILTFVTFGGACLTVPETIDTDSPSCPSKFIGIYTKAKRRPTSSFVKLYSGVPLVTIRKSPVSL FSRNHSNLLGPSLPPK(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zhao et al., 2017b

circRNA

Detail information of orai.002G162800_circ_g.3

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