Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G06040_circ_g.1 |
ID in PlantcircBase | ath_circ_000927 |
Alias | At_ciR3496 |
Organism | Arabidpsis thaliana |
Position | chr1: 1828987-1829307 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | CIRCexplorer, KNIFE, PcircRNA_finder, find_circ |
Parent gene | AT1G06040 |
Parent gene annotation |
B-box zinc finger protein 24 |
Parent gene strand | - |
Alternative splicing | AT1G06040_circ_g.2 |
Support reads | 2/91 |
Tissues | leaf/whole_plant |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G06040.1:1 AT1G06040.2:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.276562331 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015;Chu et al., 2017 |